Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_D09
(1288 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 526 e-150
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 526 e-150
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 246 e-127
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 306 2e-83
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 254 8e-68
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 254 8e-68
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 229 2e-60
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 6e-33
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 111 1e-24
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 111 1e-24
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 111 1e-24
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 110 2e-24
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 110 2e-24
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 60 4e-09
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 56 5e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 56 5e-08
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 53 4e-07
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 50 4e-06
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 50 4e-06
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 44 2e-05
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 45 1e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 45 1e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 39 0.009
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 39 0.009
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 38 0.015
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.020
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 34 0.19
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 34 0.19
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.33
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.77
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 5.4
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 5.4
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 5.4
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 5.4
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 5.4
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 5.4
AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical ... 29 7.1
AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical ... 29 7.1
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 9.4
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 9.4
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 526 bits (1299), Expect = e-150
Identities = 245/282 (86%), Positives = 259/282 (91%)
Frame = +3
Query: 111 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 290
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 291 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 470
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 471 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 650
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 651 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPAR 830
IGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+I+PP R
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQR 240
Query: 831 PTDKPLXLPLQDVYKIGGIGTVPVGRVETGVLKPGTXVVFAP 956
PTD+PL LPLQDVYKIGGIGTVPVGRVETG++KPG V FAP
Sbjct: 241 PTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAP 282
Score = 50.4 bits (115), Expect = 3e-06
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = +2
Query: 953 PANITXEVKSVXMHHEALKXAVPGKNVGFT*KXV 1054
P N+T EVKSV MHHE+L AVPG NVGF K V
Sbjct: 282 PQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNV 315
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 526 bits (1299), Expect = e-150
Identities = 245/282 (86%), Positives = 259/282 (91%)
Frame = +3
Query: 111 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 290
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 291 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 470
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 471 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 650
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 651 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPAR 830
IGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+I+PP R
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQR 240
Query: 831 PTDKPLXLPLQDVYKIGGIGTVPVGRVETGVLKPGTXVVFAP 956
PTD+PL LPLQDVYKIGGIGTVPVGRVETG++KPG V FAP
Sbjct: 241 PTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAP 282
Score = 50.4 bits (115), Expect = 3e-06
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = +2
Query: 953 PANITXEVKSVXMHHEALKXAVPGKNVGFT*KXV 1054
P N+T EVKSV MHHE+L AVPG NVGF K V
Sbjct: 282 PQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNV 315
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 246 bits (602), Expect(2) = e-127
Identities = 113/117 (96%), Positives = 116/117 (99%)
Frame = +3
Query: 111 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 290
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 291 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 461
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 228 bits (558), Expect(2) = e-127
Identities = 103/135 (76%), Positives = 115/135 (85%)
Frame = +3
Query: 552 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 731
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 732 MPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLXLPLQDVYKIGGIGTVPVGRV 911
MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+PL LPLQDVYKIGGIGTVPVGRV
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRV 233
Query: 912 ETGVLKPGTXVVFAP 956
ETG++KPG V FAP
Sbjct: 234 ETGIIKPGMVVTFAP 248
Score = 50.4 bits (115), Expect = 3e-06
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = +2
Query: 953 PANITXEVKSVXMHHEALKXAVPGKNVGFT*KXV 1054
P N+T EVKSV MHHE+L AVPG NVGF K V
Sbjct: 248 PQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNV 281
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 306 bits (751), Expect = 2e-83
Identities = 148/172 (86%), Positives = 155/172 (90%)
Frame = +3
Query: 111 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 290
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 291 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 470
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 471 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKK 626
GEFEAGISKNGQTREHALLA TLGVKQL V+ T P S R + I++
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169
Score = 60.9 bits (141), Expect = 2e-09
Identities = 40/100 (40%), Positives = 48/100 (48%)
Frame = +1
Query: 616 KSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENAS 795
+S + P +SRR T Q L D TETTC C GSRDG + RK L E S
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERPS 211
Query: 796 LKLSMPSCHLPAPLTSPXVFPCKTYTKSVVLVPCPSAELK 915
+L PS H A LT VF + T+S L P S L+
Sbjct: 212 SRLLTPSSHHNAQLTDHSVFHSRMCTRSEELEPSQSDVLR 251
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 254 bits (623), Expect = 8e-68
Identities = 126/268 (47%), Positives = 181/268 (67%), Gaps = 1/268 (0%)
Frame = +3
Query: 120 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 299
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 300 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 479
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 480 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIG 656
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 344
Query: 657 YNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPT 836
++ FVP+SG+ G+N+++ ++ W+ DG CL+E +D+ + P P+
Sbjct: 345 FSKP--KFVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPS 389
Query: 837 DKPLXLPLQDVYKIGGIGTVPVGRVETG 920
D PL + + DV K+ V G++E+G
Sbjct: 390 DGPLRIGISDVLKVASNQLVVSGKIESG 417
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 254 bits (623), Expect = 8e-68
Identities = 126/268 (47%), Positives = 181/268 (67%), Gaps = 1/268 (0%)
Frame = +3
Query: 120 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 299
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 300 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 479
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 480 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIG 656
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 362
Query: 657 YNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPT 836
++ FVP+SG+ G+N+++ ++ W+ DG CL+E +D+ + P P+
Sbjct: 363 FSKP--KFVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPS 407
Query: 837 DKPLXLPLQDVYKIGGIGTVPVGRVETG 920
D PL + + DV K+ V G++E+G
Sbjct: 408 DGPLRIGISDVLKVASNQLVVSGKIESG 435
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 229 bits (561), Expect = 2e-60
Identities = 116/283 (40%), Positives = 176/283 (62%), Gaps = 2/283 (0%)
Frame = +3
Query: 114 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 293
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 294 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 473
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 474 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 653
EFE G + GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKL 283
Query: 654 GYNPAA-VAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPP-A 827
G+NP + +VP SG G + + T W G C IE +D +LP
Sbjct: 284 GFNPKTDITYVPCSGLTGAFIKDRPTGSE--GNWY--------SGPCFIEFIDVLLPSYK 333
Query: 828 RPTDKPLXLPLQDVYKIGGIGTVPVGRVETGVLKPGTXVVFAP 956
R + P+ + + Y +GTV +G++E+G ++ G +V P
Sbjct: 334 RDFNGPVRCTVAEKY--SEMGTVIIGKMESGCVQKGDTLVVMP 374
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 6e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +3
Query: 111 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 290
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 291 DKLKAER 311
DKLK +
Sbjct: 61 DKLKVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 111 bits (267), Expect = 1e-24
Identities = 91/280 (32%), Positives = 138/280 (49%), Gaps = 4/280 (1%)
Frame = +3
Query: 117 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 296
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 297 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 476
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 477 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 650
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 199
Query: 651 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD--AILPP 824
GY P P+ G + K P + G+ K L+E LD ++P
Sbjct: 200 FGY-PGDTC--PVI--FGSALCALEGKQP---------EIGEEAVKQLLEVLDNKFVIPE 245
Query: 825 ARPTDKPLXLPLQDVYKIGGIGTVPVGRVETGVLKPGTXV 944
+ ++P+ + VY I G GTV G++E G+LK G +
Sbjct: 246 RKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKI 284
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 111 bits (267), Expect = 1e-24
Identities = 91/280 (32%), Positives = 138/280 (49%), Gaps = 4/280 (1%)
Frame = +3
Query: 117 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 296
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 297 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 476
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 477 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 650
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 651 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD--AILPP 824
GY P P+ G + K P + G+ K L+E LD ++P
Sbjct: 201 FGY-PGDTC--PVI--FGSALCALEGKQP---------EIGEEAVKQLLEVLDNKFVIPE 246
Query: 825 ARPTDKPLXLPLQDVYKIGGIGTVPVGRVETGVLKPGTXV 944
+ ++P+ + VY I G GTV G++E G+LK G +
Sbjct: 247 RKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKI 285
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 111 bits (267), Expect = 1e-24
Identities = 91/280 (32%), Positives = 138/280 (49%), Gaps = 4/280 (1%)
Frame = +3
Query: 117 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 296
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 297 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 476
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 477 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 650
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 651 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD--AILPP 824
GY P P+ G + K P + G+ K L+E LD ++P
Sbjct: 201 FGY-PGDTC--PVI--FGSALCALEGKQP---------EIGEEAVKQLLEVLDNKFVIPE 246
Query: 825 ARPTDKPLXLPLQDVYKIGGIGTVPVGRVETGVLKPGTXV 944
+ ++P+ + VY I G GTV G++E G+LK G +
Sbjct: 247 RKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKI 285
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 110 bits (265), Expect = 2e-24
Identities = 95/279 (34%), Positives = 134/279 (48%), Gaps = 5/279 (1%)
Frame = +3
Query: 123 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 296
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 297 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 476
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 477 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 656
E QT+EH +LA +GVK + + +NK D E E + ++ E + G
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHG 194
Query: 657 YNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKC---LIEALDAILPPA 827
+N GD P +G + EG+ D C LI+ALD++ P
Sbjct: 195 FN-------------GD-------ATPVIRGSALSALEGQ-DISCIERLIDALDSLPEPD 233
Query: 828 RPTDKPLXLPLQDVYKIGGIGTVPVGRVETGVLKPGTXV 944
R +P+ I G GTV VG +E GVLK G V
Sbjct: 234 RNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKGDKV 272
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 110 bits (265), Expect = 2e-24
Identities = 95/279 (34%), Positives = 134/279 (48%), Gaps = 5/279 (1%)
Frame = +3
Query: 123 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 296
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 297 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 476
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 477 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 656
E QT+EH +LA +GVK + + +NK D E E + ++ E + G
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHG 194
Query: 657 YNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKC---LIEALDAILPPA 827
+N GD P +G + EG+ D C LI+ALD++ P
Sbjct: 195 FN-------------GD-------ATPVIRGSALSALEGQ-DISCIERLIDALDSLPEPD 233
Query: 828 RPTDKPLXLPLQDVYKIGGIGTVPVGRVETGVLKPGTXV 944
R +P+ I G GTV VG +E GVLK G V
Sbjct: 234 RNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKGDKV 272
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 59.7 bits (138), Expect = 4e-09
Identities = 47/148 (31%), Positives = 67/148 (45%)
Frame = +3
Query: 135 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 314
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 315 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 494
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 495 KNGQTREHALLAFTLGVKQLIVGVNKMD 578
QT + LAF + Q+I +NK+D
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 56.0 bits (129), Expect = 5e-08
Identities = 47/148 (31%), Positives = 65/148 (43%)
Frame = +3
Query: 135 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 314
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 315 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 494
RGITI A + + IID PGH DF + D AVL++ G G G+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150
Query: 495 KNGQTREHALLAFTLGVKQLIVGVNKMD 578
T L + + I VNKMD
Sbjct: 151 SQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 56.0 bits (129), Expect = 5e-08
Identities = 39/113 (34%), Positives = 53/113 (46%)
Frame = +3
Query: 135 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 314
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 315 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 473
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 53.2 bits (122), Expect = 4e-07
Identities = 78/309 (25%), Positives = 129/309 (41%), Gaps = 16/309 (5%)
Frame = +3
Query: 87 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEM 257
++IRD P K+ + V+G+VD+GKST G L + G RT K E
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFES 185
Query: 258 GKGSFKYAWVL------DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMI 419
G+ S +L + + +D + +K VT ID GH ++K I
Sbjct: 186 GRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAKL-VTFIDLAGHEKYLKTTI 244
Query: 420 TGTS--QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 593
G + D +L++ A G G T+EH LA +L V +V V K+D
Sbjct: 245 FGMTGHMPDYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMCPAN 296
Query: 594 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG---WQVER 764
E + I + V S KK+ PI + D+++ + P K +QV
Sbjct: 297 ILEETMKNITRLVRS-AKKL----------PILVRNMDDVVHAAVNFPSKKVCPIFQVSN 345
Query: 765 KEGKADGKCLIEALDAILPPARPTDK--PLXLPLQDVYKIGGIGTVPVGRVETGVLKPGT 938
EG L+ I+P R ++ P + D+Y + G+GT+ G + +G ++
Sbjct: 346 VEGT--NLPLLRQFLNIVPLRRQLNENDPAHFQIDDIYWVDGVGTIASGTLLSGTIRLND 403
Query: 939 XVVFAPPTS 965
++ P ++
Sbjct: 404 ILLLGPTSN 412
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 50.0 bits (114), Expect = 4e-06
Identities = 72/274 (26%), Positives = 115/274 (41%), Gaps = 1/274 (0%)
Frame = +3
Query: 132 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 311
+N+ ++GHVDSGK+T T + E+G S A
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 312 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 488
R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AG
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 489 ISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPA 668
I QT EH LLA ++I+ +NK D E + + E K+V +K +G +
Sbjct: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDEN 162
Query: 669 AVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPL 848
+ PI +E S +FK +E + K IE+ I P R +
Sbjct: 163 S----PI--------VEMSLADGYFK------EEMLQNLKLAIES--RIFEPKRDEEGEF 202
Query: 849 XLPLQDVYKIGGIGTVPVGRVETGVLKPGTXVVF 950
+ + + I G GTV G V GVL+ T + F
Sbjct: 203 LIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEF 236
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 50.0 bits (114), Expect = 4e-06
Identities = 78/308 (25%), Positives = 128/308 (41%), Gaps = 15/308 (4%)
Frame = +3
Query: 87 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEM 257
++IRD P K+ + V+G+VD+GKST G L + G RT K E
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFES 185
Query: 258 GKGSFKYAWVL------DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMI 419
G+ S +L + + +D + +K VT ID GH ++K I
Sbjct: 186 GRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAKL-VTFIDLAGHEIYLKTTI 244
Query: 420 TGTSQA---DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEP 590
G + + +L++ A G G T+EH LA +L V +V V K+D P
Sbjct: 245 FGMHRPYARNYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMC-P 295
Query: 591 PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKM-PWFKGWQVERK 767
Y EE K ++ ++ P V + N PS K+ P F QV
Sbjct: 296 AYI---LEETMKNITRLVRSAKKLPILVRNMDDCVHAAVNF--PSKKVCPIF---QVSNV 347
Query: 768 EGKADGKCLIEALDAILPPARPTDK--PLXLPLQDVYKIGGIGTVPVGRVETGVLKPGTX 941
EG L+ ++P R ++ P + D+Y + G+GT+ G + +G ++
Sbjct: 348 EGT--NLPLLRQFLNMVPLRRQLNENDPAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDI 405
Query: 942 VVFAPPTS 965
++ P ++
Sbjct: 406 LLLGPTSN 413
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 44.0 bits (99), Expect(2) = 2e-05
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +3
Query: 258 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 434
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 435 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 578
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
Score = 23.0 bits (47), Expect(2) = 2e-05
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3
Query: 138 IVVIGHVDSGKST 176
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 45.2 bits (102), Expect = 1e-04
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +3
Query: 111 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 263
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 264 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 431
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132
Query: 432 QADCAVLIVAAGTG 473
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 44.8 bits (101), Expect = 1e-04
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +3
Query: 111 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 263
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 264 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 431
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132
Query: 432 QADCAVLIVAAGTG 473
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 38.7 bits (86), Expect = 0.009
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +3
Query: 117 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 293
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 294 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 458
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 38.7 bits (86), Expect = 0.009
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +3
Query: 117 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 293
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 294 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 458
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 37.9 bits (84), Expect = 0.015
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Frame = +3
Query: 84 QFVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEM 257
+ ++R P+ ++ + + V+G D GKST G L C G K I F + E+
Sbjct: 154 EVLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEV 211
Query: 258 GKGSFKYAWVLDKLKAERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITG 425
G K + V + + RG ++ A E S VT+ID G + K I G
Sbjct: 212 RTG--KTSSVCNDVIGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHG 269
Query: 426 TS--QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYS 599
+ A L+VAA + GI+ TREH L L + ++ + KMD +
Sbjct: 270 LTGYTPHFACLVVAA-----DRGIT--WATREHLGLIAALNIPMFVL-ITKMDLVD---- 317
Query: 600 EPRFEEIKKEVSSYIKKIG 656
++I K+VS+ + K G
Sbjct: 318 RQGLKKIIKDVSNLVAKAG 336
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.5 bits (83), Expect = 0.020
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +3
Query: 366 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 545
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 546 KQLIVGVNKMDSTEPPYSEPRFEEI 620
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 34.3 bits (75), Expect = 0.19
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +3
Query: 135 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 314
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 315 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 473
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 34.3 bits (75), Expect = 0.19
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +3
Query: 135 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 314
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 315 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 473
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.33
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 571 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 443
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.77
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +3
Query: 375 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 554
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 555 IVGVNKMDSTEPPYSEPR 608
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 213 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 314
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 213 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 314
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 634 PHTSRRLATTQLLSLSCPFLD 696
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 634 PHTSRRLATTQLLSLSCPFLD 696
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 634 PHTSRRLATTQLLSLSCPFLD 696
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 634 PHTSRRLATTQLLSLSCPFLD 696
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical
protein B0205.1b protein.
Length = 720
Score = 29.1 bits (62), Expect = 7.1
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Frame = +3
Query: 399 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 566
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 445 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 504
Query: 567 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 716
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 505 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 564
Query: 717 EPSTKMPWFKGWQVER 764
+P + M +G +R
Sbjct: 565 DPISSMNIGRGTLAQR 580
>AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical
protein B0205.1a protein.
Length = 745
Score = 29.1 bits (62), Expect = 7.1
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Frame = +3
Query: 399 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 566
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 470 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 529
Query: 567 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 716
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 530 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 589
Query: 717 EPSTKMPWFKGWQVER 764
+P + M +G +R
Sbjct: 590 DPISSMNIGRGTLAQR 605
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 9.4
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 132 INIVVIGHVDSGKSTTT 182
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 9.4
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -3
Query: 554 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 396
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 395 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 276
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,370,417
Number of Sequences: 27780
Number of extensions: 568174
Number of successful extensions: 1659
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1636
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3599888010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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