Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_D07
         (1327 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024214-2|AAF36076.1|  108|Caenorhabditis elegans Hypothetical ...    99   8e-21
AL117203-20|CAB55118.1|  244|Caenorhabditis elegans Hypothetical...    87   2e-17
AL117203-21|CAN86632.1|  171|Caenorhabditis elegans Hypothetical...    62   1e-09
AC024880-8|AAK85514.1|  167|Caenorhabditis elegans Hypothetical ...    49   6e-06
Z81035-6|CAB02739.1|  119|Caenorhabditis elegans Hypothetical pr...    47   3e-05
Z54216-1|CAA90943.1|  308|Caenorhabditis elegans Hypothetical pr...    47   3e-05
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr...    35   0.15 
Z81514-5|CAB04192.2|  611|Caenorhabditis elegans Hypothetical pr...    31   1.8  
U40060-6|AAA81144.1|  268|Caenorhabditis elegans Hypothetical pr...    29   7.4  
Z68317-3|CAA92687.1|  599|Caenorhabditis elegans Hypothetical pr...    29   9.7  

>AC024214-2|AAF36076.1|  108|Caenorhabditis elegans Hypothetical
           protein Y77E11A.6 protein.
          Length = 108

 Score = 98.7 bits (235), Expect = 8e-21
 Identities = 38/62 (61%), Positives = 46/62 (74%)
 Frame = +2

Query: 254 KELDYIMGGAAAWENVDSTDAVCPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNW 433
           K++D ++GG  AW N   TD  CP C +GRAYFMQLQTRSADEP T FYRC ++ CAH W
Sbjct: 47  KDIDDVLGGPGAWANAQVTDETCPVCSHGRAYFMQLQTRSADEPSTIFYRCADNACAHRW 106

Query: 434 RD 439
           +D
Sbjct: 107 KD 108


>AL117203-20|CAB55118.1|  244|Caenorhabditis elegans Hypothetical
            protein Y48C3A.18a protein.
          Length = 244

 Score = 87.4 bits (207), Expect = 2e-17
 Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
 Frame = +1

Query: 580  SLRAAECL-AKGQVIAVPTDTIYGLACSANCPQAIKKLYCIKGREAVKPVAICVTSIADL 756
            ++ AA C+  +G ++A+PTDT+YG++      Q   +LY +K R   KP+ I + S   +
Sbjct: 18   AIDAAVCVFLRGGIVALPTDTLYGISTLL---QYSDRLYALKQRPYEKPLGIFLPSPTAM 74

Query: 757  RKWGEASHISDKLLDSLLPGPVTVVLQKTKHLDNPFLNPSTTKIGIRIPKHDFMNTVTKI 936
            +     + ISD+L + LLPGPVT++ ++   L   F NP    +  R+P    ++T+ K 
Sbjct: 75   KLVSRQT-ISDELANCLLPGPVTLMFERLPCLPAEF-NPGVVNVACRVPDCPIVSTICKK 132

Query: 937  FDMPVAXTSANFSNEP-STXSIXEXEHLXPXLXXIFDGGLLXSGXE 1071
               P+A TSAN S    +  SI     L P +  I D G + S  E
Sbjct: 133  LGQPLAQTSANVSGSSLNPTSIDHFRDLHPNIDLILDAGSIISSGE 178


>AL117203-21|CAN86632.1|  171|Caenorhabditis elegans Hypothetical
            protein Y48C3A.18b protein.
          Length = 171

 Score = 61.7 bits (143), Expect = 1e-09
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
 Frame = +1

Query: 781  ISDKLLDSLLPGPVTVVLQKTKHLDNPFLNPSTTKIGIRIPKHDFMNTVTKIFDMPVAXT 960
            ISD+L + LLPGPVT++ ++   L   F NP    +  R+P    ++T+ K    P+A T
Sbjct: 9    ISDELANCLLPGPVTLMFERLPCLPAEF-NPGVVNVACRVPDCPIVSTICKKLGQPLAQT 67

Query: 961  SANFSNEP-STXSIXEXEHLXPXLXXIFDGGLLXSGXE 1071
            SAN S    +  SI     L P +  I D G + S  E
Sbjct: 68   SANVSGSSLNPTSIDHFRDLHPNIDLILDAGSIISSGE 105


>AC024880-8|AAK85514.1|  167|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.5 protein.
          Length = 167

 Score = 49.2 bits (112), Expect = 6e-06
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +2

Query: 257 ELDYIMGGAAAWENVDSTDA-VCPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNW 433
           EL  I+G       +  T+   CP CG  +A F Q QT+ A+E M  +Y C +  C H W
Sbjct: 106 ELTQIVGDIIHDPTLPKTEEHQCPVCGKSKAVFFQAQTKKAEEEMRLYYVCASQDCQHRW 165

Query: 434 RD 439
            +
Sbjct: 166 TE 167


>Z81035-6|CAB02739.1|  119|Caenorhabditis elegans Hypothetical
           protein C15H11.8 protein.
          Length = 119

 Score = 47.2 bits (107), Expect = 3e-05
 Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
 Frame = +2

Query: 293 ENVDSTDAV----CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHK 418
           EN +S DAV    C KCG+ +A +  +QTRSADE  T FY C   K
Sbjct: 67  ENDESADAVVDHICTKCGHSKASYSTMQTRSADEGQTVFYTCLKCK 112


>Z54216-1|CAA90943.1|  308|Caenorhabditis elegans Hypothetical
           protein T24H10.1 protein.
          Length = 308

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 20/39 (51%), Positives = 25/39 (64%)
 Frame = +2

Query: 320 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 436
           C KCG     + QLQTRS+DEPMTTF  C   +C + W+
Sbjct: 270 CGKCGKKNCTYTQLQTRSSDEPMTTFVFCL--ECGNRWK 306


>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical protein
            C13F10.4 protein.
          Length = 2076

 Score = 34.7 bits (76), Expect = 0.15
 Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
 Frame = -3

Query: 980  SLLKLALVXATG--MSNIFVTVFIKSCFGILI--PIFVVEGFKNGLSRCLVFCRTTVTGP 813
            +L+ +AL+  TG  M  +FV   + SC  +LI  P FVV+    G+S+CL    T V GP
Sbjct: 975  ALVAMALIAETGSGMFRVFVETTLSSCLKLLISTPTFVVD-VVQGISKCLTALITCV-GP 1032


>Z81514-5|CAB04192.2|  611|Caenorhabditis elegans Hypothetical protein
            F26F2.6 protein.
          Length = 611

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 6/125 (4%)
 Frame = +1

Query: 655  CSANCPQAIKKLYCIKGREAVKPVAICVTSIADLRKWGEASHI---SDKLLDSLLPGPVT 825
            C ANC   + + Y   G E VKP        A +  W E  H+    ++   + L     
Sbjct: 165  CDANCSVTMVQDYAKPGPETVKP------RDAQISNWDECMHMCYEEEECQIAYLDSDAK 218

Query: 826  VVLQKTKHLDNPFLNPSTTKIGIRIPKHDFMNTVTKIFDMPVAXTSANF---SNEPSTXS 996
              +  +      F+N S+   G R+     ++  T +F  P    S  F   S EPST  
Sbjct: 219  KCVWYSSDDGLTFMNKSSADSGKRLVIKMKVDETTCLFTTPQLLDSFKFGTQSTEPSTTE 278

Query: 997  IXEXE 1011
            I   E
Sbjct: 279  ISTTE 283


>U40060-6|AAA81144.1|  268|Caenorhabditis elegans Hypothetical
           protein F38B6.3 protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 174 SRFFFNMLFCPTCANMLMVEEGPEA 248
           SRFFFN  F  +  NM+ +E G E+
Sbjct: 9   SRFFFNFTFSRSRENMIHIENGKES 33


>Z68317-3|CAA92687.1|  599|Caenorhabditis elegans Hypothetical
           protein T01H3.3 protein.
          Length = 599

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
 Frame = -3

Query: 746 ILVTHMATGFTASLPF-IQ*SFLIA*GQLALQ-----ANP*IVSVGTAITWPLARHSAAL 585
           +L+T    GF+ S  F +  + LI  G L  Q     +    +S+G  ++WP+A +  AL
Sbjct: 255 LLLTRFLLGFSFSSVFPVMGNLLIQWGPLKEQLIFITSMFMFLSIGPVVSWPIAHYFHAL 314

Query: 584 KLAVKST-HDTTGVIAFFII 528
           ++++ S  +   G +AF  +
Sbjct: 315 EISLDSVYYIQCGTLAFLTL 334


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,701,862
Number of Sequences: 27780
Number of extensions: 461879
Number of successful extensions: 983
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3715184046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)