Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_D06
         (1361 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...   165   3e-39
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...   110   9e-23
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    90   1e-16
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    73   2e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ...    70   1e-10
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ...    66   2e-09
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0...    55   4e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ...    53   2e-05
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma...    41   0.086

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score =  165 bits (400), Expect = 3e-39
 Identities = 86/125 (68%), Positives = 89/125 (71%), Gaps = 1/125 (0%)
 Frame = +3

Query: 567 SKRPXTVKRPRCWRFSIGSAPLTSIXKIXAQVXGGETRQDYKDTRRFPLEAPSCALLFRP 746
           SK+  T    R  RFSIGSAPLTSI KI AQV GGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2   SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61

Query: 747 XRLPDTCPXFSLREAWRFLIXHAVGISXRCRS-SXQAGLCAEPPRSXRGXGLIXXTXVLX 923
            RLPDTCP FSLREAWRFLI HAVGIS RCRS +    +C  PP S         T VL 
Sbjct: 62  CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTA-APYPVTIVLS 120

Query: 924 PXRXD 938
           P R D
Sbjct: 121 PTRKD 125


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score =  110 bits (264), Expect = 9e-23
 Identities = 66/108 (61%), Positives = 70/108 (64%)
 Frame = +3

Query: 435 VPRSLTRCARSFGXGERYQLTQRR*YGYPQNQGIXQERTCEQKXSKRPXTVKRPRCWRFS 614
           +PRSLTR ARSFG GERY+LT           G   E T  +  SK      RPR  RFS
Sbjct: 38  LPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEEI---RPRRSRFS 85

Query: 615 IGSAPLTSIXKIXAQVXGGETRQDYKDTRRFPLEAPSCALLFRPXRLP 758
           IGSAPLTSI K  AQ+ GGETRQDYKD RRFPL APSCALLF P  LP
Sbjct: 86  IGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 89.8 bits (213), Expect = 1e-16
 Identities = 43/54 (79%), Positives = 45/54 (83%)
 Frame = +3

Query: 585 VKRPRCWRFSIGSAPLTSIXKIXAQVXGGETRQDYKDTRRFPLEAPSCALLFRP 746
           V+ PR  RFSIGSAPLTSI K  AQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44  VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97


>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 72.5 bits (170), Expect = 2e-11
 Identities = 37/39 (94%), Positives = 37/39 (94%)
 Frame = +2

Query: 437 SSLTDSLRSVVRLXRAVSAHSKAVIRLSTESGDXAGKNM 553
           SSLTDSLRSVVRL RAVSAHSKAVIRLSTESGD AGKNM
Sbjct: 21  SSLTDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKNM 59


>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
           root|Rep: Putative uncharacterized protein - Escherichia
           coli
          Length = 61

 Score = 70.1 bits (164), Expect = 1e-10
 Identities = 33/43 (76%), Positives = 33/43 (76%)
 Frame = -1

Query: 575 PFAXLLLTCSFLRYPLILWITVLPPLSELIPLAXAERPSAASQ 447
           P    LLTCSF  YPLILWITVLPPLSEL PLA  ERPS ASQ
Sbjct: 19  PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERPSVASQ 61


>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 37

 Score = 66.1 bits (154), Expect = 2e-09
 Identities = 31/37 (83%), Positives = 32/37 (86%)
 Frame = +2

Query: 725 VRSPVPTLXLTGYLSXFLPSGSVALSHXSRCXYLXSV 835
           +RSPVPTL LTGYLS FLPSGSVALSH SRC YL SV
Sbjct: 1   MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37


>UniRef50_UPI00015C640B Cluster: hypothetical protein
           CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
           Citrobacter koseri ATCC BAA-895
          Length = 99

 Score = 55.2 bits (127), Expect = 4e-06
 Identities = 34/77 (44%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
 Frame = -2

Query: 886 RXERGGSAHSPAWXDDLHRXEIPTA*XMRKR-HASRREKXGQVSGKRQGRNRRAHEGASR 710
           R ERG  A+SPAW +        ++    K     + +K  QVSGKRQGRNRRAHEGA+ 
Sbjct: 23  RAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAG 82

Query: 709 GKRLVSL*SCRVSPPXT 659
            K   SL      PP T
Sbjct: 83  EKSPASLSPVGFRPPLT 99


>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. SS
          Length = 114

 Score = 53.2 bits (122), Expect = 2e-05
 Identities = 28/77 (36%), Positives = 40/77 (51%)
 Frame = +3

Query: 516 YPQNQGIXQERTCEQKXSKRPXTVKRPRCWRFSIGSAPLTSIXKIXAQVXGGETRQDYKD 695
           +P+N  I  +R   +   + P T        F   S PLT+I KI  Q    +T+ +YK 
Sbjct: 38  HPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKY 97

Query: 696 TRRFPLEAPSCALLFRP 746
           T  FPL++PS +LLF P
Sbjct: 98  TTPFPLQSPSYSLLFPP 114


>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
           Magnoliophyta|Rep: Putative reverse transcriptase -
           Zingiber officinale (Ginger)
          Length = 49

 Score = 40.7 bits (91), Expect = 0.086
 Identities = 18/21 (85%), Positives = 19/21 (90%)
 Frame = +3

Query: 372 SALMXRPTRGERRFAYXALFR 434
           +ALM RPTRGERRFAY ALFR
Sbjct: 25  AALMNRPTRGERRFAYWALFR 45


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,410,012
Number of Sequences: 1657284
Number of extensions: 10308877
Number of successful extensions: 23090
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 22096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23074
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 141727865650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)