Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_D05
(1306 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 417 e-117
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 405 e-114
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 367 e-102
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 327 2e-90
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 276 4e-75
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 169 1e-42
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 126 5e-30
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 83 8e-17
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 30 0.61
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 30 0.61
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 29 1.9
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 2.5
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 28 3.3
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 28 3.3
SPAC1F7.08 |fio1||iron transport multicopper oxidase Fio1|Schizo... 27 7.5
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 10.0
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 417 bits (1028), Expect = e-117
Identities = 196/238 (82%), Positives = 217/238 (91%)
Frame = +1
Query: 226 NRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 405
NRTTPSYVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGRKF+D VQ+DMKHWPF+V
Sbjct: 33 NRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKV 92
Query: 406 VSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 585
+S GKP ++V YKGE KTF PEE+SSMVL KM+ETAEAYLG V +AV+TVPAYFNDSQ
Sbjct: 93 ISKDGKPVLQVEYKGETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQ 152
Query: 586 RQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 765
RQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIFDLGGGTFDVS+LTIE+
Sbjct: 153 RQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLLTIEE 212
Query: 766 GIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKR 939
GIFEVK+TAGDTHLGGEDFD+R+VNHF+QEFKRK KKD+ N RA+RRLRTACERAKR
Sbjct: 213 GIFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDITGNARAVRRLRTACERAKR 270
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +3
Query: 138 AVGIDLGTTYSCVGVFQHGKVEIIANDQGQQ 230
++GIDLGTTYSCVG F + +VEIIANDQG +
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNR 34
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3
Query: 990 GXDFYTSXTRARFXXL 1037
G DFYTS TRARF L
Sbjct: 288 GIDFYTSITRARFEEL 303
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 405 bits (998), Expect = e-114
Identities = 191/238 (80%), Positives = 213/238 (89%)
Frame = +1
Query: 226 NRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 405
NRTTPSYVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGR+F D VQ+DMKHWPF+V
Sbjct: 33 NRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKV 92
Query: 406 VSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 585
+ GKP I+V +KGE KTF PEE+SSMVL KM+E+AEA+LG V +AV+TVPAYFNDSQ
Sbjct: 93 IEKDGKPLIQVEFKGETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQ 152
Query: 586 RQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 765
RQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIFDLGGGTFDVS+LTIE+
Sbjct: 153 RQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEE 212
Query: 766 GIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKR 939
GIFEVK+TAGDTHLGGEDFD+R+VNHF QEFKRK KKD+ N RA+RRLRTACERAKR
Sbjct: 213 GIFEVKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKKDITGNARAVRRLRTACERAKR 270
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +3
Query: 138 AVGIDLGTTYSCVGVFQHGKVEIIANDQGQQ 230
++GIDLGTTYSCVG F + +VEIIANDQG +
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNR 34
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3
Query: 990 GXDFYTSXTRARFXXL 1037
G DFYTS TRARF L
Sbjct: 288 GIDFYTSITRARFEEL 303
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 367 bits (902), Expect = e-102
Identities = 172/243 (70%), Positives = 202/243 (83%)
Frame = +1
Query: 211 PTTRDNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKH 390
P + RTTPS+VAFT+TERL+GDAAKNQ AMNP NT+FDAKRLIGR++ED Q D+KH
Sbjct: 32 PNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYEDPETQKDIKH 91
Query: 391 WPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 570
WPF+V+ + G P I+V Y GE K F +E+S+MVLTKMKE +EA L K V+ AVITVPAY
Sbjct: 92 WPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAY 151
Query: 571 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSI 750
F+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFDLGGGTFDVS+
Sbjct: 152 FSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSL 211
Query: 751 LTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACER 930
L I+ G+FEV +TAGDTHLGGEDFDN +V HF+QEFKRK K D++ + RALRRLR+ACER
Sbjct: 212 LKIQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEFKRKQKIDISDDPRALRRLRSACER 271
Query: 931 AKR 939
AKR
Sbjct: 272 AKR 274
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +3
Query: 138 AVGIDLGTTYSCVGVFQHGKVEIIANDQG 224
A+GIDLGTTYSCV V++ VEII NDQG
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQG 36
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 327 bits (803), Expect = 2e-90
Identities = 149/249 (59%), Positives = 200/249 (80%)
Frame = +1
Query: 193 GRWRSSPTTRDNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATV 372
GR + NR TPSYVAFT+ ERL+G+AAKNQ NP NTIFD KRLIGRKF++ T+
Sbjct: 55 GRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTM 114
Query: 373 QADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAV 552
D+K +PF +V+D +P ++V G+ K F PEE+S+M+L+KMK+TAEAYLGK V +AV
Sbjct: 115 AKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAV 174
Query: 553 ITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGG 732
+TVPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++DLGGG
Sbjct: 175 VTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLGGG 233
Query: 733 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRL 912
TFDVS+L+I++G+FEV +T+GDTHLGGEDFDNR++N+ + + RK D+ + +A+ +L
Sbjct: 234 TFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRVINYLARTYNRKNNVDVTKDLKAMGKL 293
Query: 913 RTACERAKR 939
+ E+AKR
Sbjct: 294 KREVEKAKR 302
Score = 53.2 bits (122), Expect = 8e-08
Identities = 22/30 (73%), Positives = 27/30 (90%)
Frame = +3
Query: 141 VGIDLGTTYSCVGVFQHGKVEIIANDQGQQ 230
+GIDLGTTYSCV V ++G+VEIIANDQG +
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNR 67
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 276 bits (677), Expect = 4e-75
Identities = 134/237 (56%), Positives = 174/237 (73%), Gaps = 1/237 (0%)
Frame = +1
Query: 229 RTTPSYVAFT-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 405
RTTPS VAFT D ERL+G +AK Q +NP NT F KRLIGR+F++ VQ D+K P+++
Sbjct: 82 RTTPSVVAFTKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKI 141
Query: 406 VSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 585
V + KT+ P ++ +L+KM+ETA YLGK V+NAV+TVPAYFNDSQ
Sbjct: 142 VEHSNGD---AWLEARGKTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQ 198
Query: 586 RQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 765
RQATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FDLGGGTFD+SIL + +
Sbjct: 199 RQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVAVFDLGGGTFDISILELNN 256
Query: 766 GIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAK 936
G+FEV+ST GDTHLGGEDFD +V H V+ FK+ DL+ ++ A++R+R A E+AK
Sbjct: 257 GVFEVRSTNGDTHLGGEDFDVALVRHIVETFKKNEGLDLSKDRLAVQRIREAAEKAK 313
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 129 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQG 224
K P +GIDLGTT SC+ + + ++IAN +G
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEG 80
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 169 bits (410), Expect = 1e-42
Identities = 93/243 (38%), Positives = 139/243 (57%), Gaps = 5/243 (2%)
Frame = +1
Query: 226 NRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFE 402
NR+TPS V++ + R +G+AAK+ A N NT+ KRL GR ++D ++ + +
Sbjct: 36 NRSTPSLVSYGERSRFLGEAAKSAEASNFRNTVGSLKRLAGRTYDDPEIKDIESNFISAK 95
Query: 403 VVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDS 582
+ G KV Y E+ F ++ + TK+K AEA L +V + VI++PA+F D
Sbjct: 96 LTEVDGFVGAKVQYLNEETAFSNIQLIAAYFTKIKAIAEAELIGSVSDVVISIPAWFTDI 155
Query: 583 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVLIFDLGGGTFDVSI 750
QR+A +A I+GLN LR++N+ AAA+ YG+ K E R V I D G + VSI
Sbjct: 156 QRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFGHSNYSVSI 215
Query: 751 LTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACER 930
+ G F +KST D +LG + D ++++F EFK KYK D+ +N +A RL TA ER
Sbjct: 216 VEFSRGQFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYKIDVLSNPKATFRLATAVER 275
Query: 931 AKR 939
K+
Sbjct: 276 LKK 278
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 126 bits (305), Expect = 5e-30
Identities = 70/244 (28%), Positives = 133/244 (54%), Gaps = 6/244 (2%)
Frame = +1
Query: 226 NRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 405
NR PS +++ + G A+ Q+ N +N++ + + L+G+ ++ T+ H+
Sbjct: 55 NRQIPSILSYHGDQEYHGVQARGQLVRNADNSVTNFRDLLGKSHDELTLHHC--HYSANP 112
Query: 406 VSDGGKPKIKVAYKGED------KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPA 567
V+ G+ K+ + ++ K E S L ++ E+AE +LG V V++VP
Sbjct: 113 VNVEGQIGFKITVQEDEESDPKEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPV 172
Query: 568 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVS 747
YF D+QR+A + A +GL VL++I++P A +A ++ ++ V++ + G +VS
Sbjct: 173 YFTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTVVVANFGATRSEVS 232
Query: 748 ILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACE 927
+++++ G+ + ++ D +LGGE + +VN F +EF++K D N R+L +LR CE
Sbjct: 233 VVSVKGGLMTILASVHDENLGGEQLTDVLVNFFAKEFEKKNGIDPRKNARSLAKLRAQCE 292
Query: 928 RAKR 939
KR
Sbjct: 293 ITKR 296
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +3
Query: 141 VGIDLGTTYSCVGVFQHGKVEIIANDQGQQDHSVLCCVHRHRASH 275
+GI G S + + GK +++AN++G + + H + H
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYH 71
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 83.0 bits (196), Expect = 8e-17
Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 16/256 (6%)
Frame = +1
Query: 217 TRDNRTTP-SYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRK-FEDATVQADMKH 390
T+D R S VAF ER+ G A N P ++I + K L+ E VQ
Sbjct: 50 TKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAHSIRNVKELLDTAGLESVLVQKYQSS 109
Query: 391 WPFEVVSDGGKPKIKVAYK-GEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPA 567
+P + + + +++ +++ + EE+ +M + AE + + + V+TVP
Sbjct: 110 YPAIQLVENEETTSGISFVISDEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPP 169
Query: 568 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK-GTGERNVLIFDLGGGTFDV 744
+FN+ QR +A I +VL +I++ A AI Y L + T +I+D G G+
Sbjct: 170 HFNELQRSILLEAARILNKHVLALIDDNVAVAIEYSLSRSFSTDPTYNIIYDSGSGSTSA 229
Query: 745 SIL---TIE-------DGIFEVKSTA-GDT-HLGGEDFDNRMVNHFVQEFKRKYKKDLAT 888
+++ T+E I +++ A G T L G + + +++ F +K+ DL+
Sbjct: 230 TVISFDTVEGSSLGKKQNITRIRALASGFTLKLSGNEINRKLIGFMKNSFYQKHGIDLSH 289
Query: 889 NKRALRRLRTACERAK 936
N RAL RL R K
Sbjct: 290 NHRALARLEKEALRVK 305
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 30.3 bits (65), Expect = 0.61
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +1
Query: 247 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKP 426
+ F+D E GD A + P + AK L+G+ + + D P++V+ D P
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184
Query: 427 KIKVAYKGEDKTFFPE 474
+K+ G + F +
Sbjct: 185 -LKLMIDGTVRNFIAQ 199
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 30.3 bits (65), Expect = 0.61
Identities = 36/157 (22%), Positives = 65/157 (41%)
Frame = -3
Query: 824 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP*AIAAAVGS 645
S SS P S + DF+S I + + +S +P S +S+ S S P + + ++ S
Sbjct: 541 SSSSIP--TSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSST--SSPSSTSLSISS 596
Query: 644 LMIRRTFKPEMVPASFVACL*ESLKYAGTVITAFCTVLPR*ASAVSFIFVSTMELTSSGK 465
TF S + I++ T+L + S + +S+ + S
Sbjct: 597 SSTSSTFSSAST---------SSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSS 647
Query: 464 KVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSN 354
+LSS + + + SL+T S+ T+ SS+
Sbjct: 648 SILSSSIST---IPISSSLSTYSSSVIPSSSTLVSSS 681
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 824 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSK 714
+KSSP K VSP V SK +S V + S +P +K
Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSIPSSITK 239
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 2.5
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -3
Query: 824 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS 678
+ S PP P + IP PPPRS ST R P P S
Sbjct: 333 NSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 144 GIDLGTTYSCVGVFQHGKVEIIANDQGQQDHSVL 245
G LG TY+ V Q G VE+ D Q H+++
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQRHTLI 1312
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 133 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRDNRTT 237
HP S W+P LVS+ W +SP+++ RTT
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQ--RTT 315
>SPAC1F7.08 |fio1||iron transport multicopper oxidase
Fio1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 622
Score = 26.6 bits (56), Expect = 7.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 241 TEWSCCPWSLAMISTFPCWKTPTQEYVVP 155
T+W P+++ + F WK PT VP
Sbjct: 164 TDWYYTPFNILVPDEFKTWKNPTGAEPVP 192
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 26.2 bits (55), Expect = 10.0
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +1
Query: 676 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 846
LDK G+ I GG T SIL +GI VK E F+N F
Sbjct: 48 LDKAPAGKVKDYIASHGGHTVITSILIANNGIAAVKEIRSIRKWAYETFNNERAIKF 104
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,643,223
Number of Sequences: 5004
Number of extensions: 95313
Number of successful extensions: 327
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 713396902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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