Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_D02
(1254 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 151 3e-35
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 61 7e-08
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 60 9e-08
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 60 2e-07
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 55 4e-06
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 46 0.002
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 45 0.005
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 43 0.014
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 41 0.058
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 40 0.18
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 36 2.9
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 35 3.8
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 151 bits (367), Expect = 3e-35
Identities = 68/99 (68%), Positives = 71/99 (71%)
Frame = +3
Query: 597 FPIGXXPLTSXXKIDXQXKGGXXRXXXKNXRXXPLKAPXXXLLFXPCRLPXTCPPFXLRE 776
F IG PLTS KID Q +GG R K+ R PL+AP LLF PCRLP TCPPF LRE
Sbjct: 16 FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLRE 75
Query: 777 AWRFLIXHAVGISXRCRSXXPXWAVCTNPPFSPTGGPYP 893
AWRFLI HAVGIS RCRS P WAVCTNPPFSPT PYP
Sbjct: 76 AWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYP 114
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 60.9 bits (141), Expect = 7e-08
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = -2
Query: 881 TGRAERGVCAHSPXWXXRPTPX*DTYSVXYEKAPRFPKGER 759
+ RAERGV A+SP W RP P DT SV YEKAPRFPKG++
Sbjct: 21 SSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKK 61
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 60.5 bits (140), Expect = 9e-08
Identities = 28/35 (80%), Positives = 28/35 (80%)
Frame = +2
Query: 719 SPVPTLPFTGXLSXFXPSGSVALSHXSRCRYLXXV 823
SPVPTLP TG LS F PSGSVALSH SRCRYL V
Sbjct: 3 SPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 59.7 bits (138), Expect = 2e-07
Identities = 45/120 (37%), Positives = 50/120 (41%)
Frame = +3
Query: 387 RGKXVCXXGXLPXPRXLTXCXRSXGXGXXYXXXQXXXYGXPQNXGITQEKTXXQKAXKRP 566
R +C G +P PR LT RS G G Y G E T +K +
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT--RKTLSKE 75
Query: 567 ETVKRPXCWXFPIGXXPLTSXXKIDXQXKGGXXRXXXKNXRXXPLKAPXXXLLFXPCRLP 746
E RP F IG PLTS K D Q GG R K+ R PL AP LLF P LP
Sbjct: 76 EI--RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 54.8 bits (126), Expect = 4e-06
Identities = 25/46 (54%), Positives = 26/46 (56%)
Frame = +3
Query: 756 PPFXLREAWRFLIXHAVGISXRCRSXXPXWAVCTNPPFSPTGGPYP 893
PPF L + GIS RCRS P WAV NPPFSPT PYP
Sbjct: 59 PPFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNPPFSPTAAPYP 104
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 46.0 bits (104), Expect = 0.002
Identities = 25/54 (46%), Positives = 27/54 (50%)
Frame = +3
Query: 573 VKRPXCWXFPIGXXPLTSXXKIDXQXKGGXXRXXXKNXRXXPLKAPXXXLLFXP 734
V+ P F IG PLTS K D Q GG R K+ R PL AP LLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 44.8 bits (101), Expect = 0.005
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = -2
Query: 893 RIRXTGRAERGVCAHSPXWXXRPTP 819
RIR +GRAERGV AHSP W RPTP
Sbjct: 17 RIRRSGRAERGVRAHSPAWSERPTP 41
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 43.2 bits (97), Expect = 0.014
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2
Query: 893 RIRXTGRAERGVCAHSPXWXXRPTPX*DT 807
RIR + RAERGV A+SP W RPTP DT
Sbjct: 17 RIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein -
Escherichia coli
Length = 84
Score = 41.1 bits (92), Expect = 0.058
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 851 VHKPPVQPDRWXLSG*LSS*XXPGKKQXIPXGXXXXNXITKPRFXGG-LKILEXXXNXGY 1027
+H+PPVQPDR LSG P + P N I++ R+ GG + L+ N GY
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGY 60
Query: 1028 XK 1033
+
Sbjct: 61 TR 62
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 39.5 bits (88), Expect = 0.18
Identities = 22/76 (28%), Positives = 32/76 (42%)
Frame = +3
Query: 507 PQNXGITQEKTXXQKAXKRPETVKRPXCWXFPIGXXPLTSXXKIDXQXKGGXXRXXXKNX 686
P+N I ++ + + + P T FP PLT+ KI Q K + K
Sbjct: 39 PRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYT 98
Query: 687 RXXPLKAPXXXLLFXP 734
PL++P LLF P
Sbjct: 99 TPFPLQSPSYSLLFPP 114
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 35.5 bits (78), Expect = 2.9
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = +2
Query: 419 SXSXXTDSLXXVXRXXXXVSXXXXXXIRXSXKSGDNXGKN 538
S S TDSL V R VS IR S +SGDN GKN
Sbjct: 19 SASSLTDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKN 58
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 35.1 bits (77), Expect = 3.8
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = +1
Query: 364 AXXNRPTPGERXFAXXAXFRFXAH 435
A NRPT GER FA A FRF AH
Sbjct: 26 ALMNRPTRGERRFAYWALFRFLAH 49
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,266,496
Number of Sequences: 1657284
Number of extensions: 7335547
Number of successful extensions: 7253
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7248
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 127150142326
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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