Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_C24
         (1287 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   126   3e-31
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   126   3e-31
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   120   2e-29
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   2.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   2.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   4.9  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   6.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   8.6  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   8.6  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  126 bits (305), Expect = 3e-31
 Identities = 59/67 (88%), Positives = 63/67 (94%)
 Frame = +3

Query: 639 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 818
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 819 FDNRMGE 839
           FDNR+ E
Sbjct: 61  FDNRLVE 67



 Score = 55.6 bits (128), Expect = 8e-10
 Identities = 26/56 (46%), Positives = 34/56 (60%)
 Frame = +1

Query: 835  VNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRXXXXXXXXXXXXXXXFEGIDF 1002
            V +  Q+FK+K+K D++ N RALRRLRT CERAKR               F+GID+
Sbjct: 66   VEYCTQDFKKKHKADISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGIDY 121


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  126 bits (305), Expect = 3e-31
 Identities = 59/67 (88%), Positives = 63/67 (94%)
 Frame = +3

Query: 639 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 818
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 819 FDNRMGE 839
           FDNR+ E
Sbjct: 61  FDNRLVE 67



 Score = 55.6 bits (128), Expect = 8e-10
 Identities = 26/56 (46%), Positives = 34/56 (60%)
 Frame = +1

Query: 835  VNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRXXXXXXXXXXXXXXXFEGIDF 1002
            V +  Q+FK+K+K D++ N RALRRLRT CERAKR               F+GID+
Sbjct: 66   VEYCTQDFKKKHKADISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGIDY 121


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein 70
            protein.
          Length = 195

 Score =  120 bits (290), Expect = 2e-29
 Identities = 67/144 (46%), Positives = 92/144 (63%)
 Frame = +3

Query: 639  INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 818
            INEPTAAAIAYGLDKKG  E+N+L++DLGGGTFDVSILTI++G+FEV +T+GDTHLGGED
Sbjct: 1    INEPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFEVVATSGDTHLGGED 59

Query: 819  FDNRMGEPLCPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDLVIVXTSEH*XXFSL*GY* 998
            FD ++ +     V+++ +K  R  +++       + + K DL  V  +       L  Y 
Sbjct: 60   FDQKVMDYFIKMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYD 119

Query: 999  LLXVIXRARFXXLNADLXRFTMXP 1070
                + RA+F  LN D    T+ P
Sbjct: 120  FSETLTRAKFEELNNDQFLKTLKP 143


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +1

Query: 136 RSRNRSGYHVLLRWCLPAREGGDHRQRPGATGPLRLMLRSQ 258
           + R R G     +WC P R       R    GP RL  RS+
Sbjct: 573 KCRARYGLDQQNQWCKPCRPREQLTWRRNFHGPHRLAARSR 613


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +1

Query: 136 RSRNRSGYHVLLRWCLPAREGGDHRQRPGATGPLRLMLRSQ 258
           + R R G     +WC P R       R    GP RL  RS+
Sbjct: 465 KCRARYGLDQQNQWCKPCRPREQLTWRRNFHGPHRLAARSR 505


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +3

Query: 411 DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 536
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 594 TKDAGTISGLNVLRIINEPTAA 659
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 12/61 (19%), Positives = 23/61 (37%)
 Frame = -2

Query: 845 KWFTHAIVKVLTSQVGVAGGGFHLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVS 666
           K  T  I KVL  +   +G  +           G + G   +++D Y +    +  K + 
Sbjct: 210 KLLTSKIYKVLEEKYKTSGSLYTCWSEFTQKTQGQIYGIKVDIRDAYGNVKIPVLCKLIQ 269

Query: 665 N 663
           +
Sbjct: 270 S 270


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
 Frame = +2

Query: 482 FH-GAYENEGNCRSL------SRQNCAECSYHGSRVLQ*LSKTSHKRCR 607
           FH GA+  EG C+S       +  + +EC  +G  V+   ++T+ K CR
Sbjct: 15  FHFGAFTCEG-CKSFFGRTYNNISSISECKNNGECVINKKNRTACKACR 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 261,584
Number of Sequences: 336
Number of extensions: 5610
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 37918809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)