Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_C22
(1266 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 423 e-118
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 398 e-111
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 398 e-111
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 213 3e-55
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 208 6e-54
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 202 6e-52
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 202 6e-52
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 181 8e-46
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 177 1e-44
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 173 3e-43
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 120 3e-27
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 120 3e-27
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 120 3e-27
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 111 8e-25
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 105 5e-23
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 104 1e-22
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 100 2e-21
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 100 2e-21
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 100 2e-21
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 100 2e-21
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 100 2e-21
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 100 2e-21
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 100 2e-21
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 100 2e-21
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 99 6e-21
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 99 8e-21
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 97 2e-20
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 96 5e-20
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 96 5e-20
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 96 5e-20
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 94 2e-19
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 89 6e-18
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 89 6e-18
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 85 8e-17
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 85 8e-17
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 85 8e-17
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 83 3e-16
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 83 3e-16
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 78 1e-14
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 78 1e-14
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 78 1e-14
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 70 4e-12
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 70 4e-12
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 70 4e-12
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 44 3e-04
Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical pr... 38 0.015
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 36 0.061
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 36 0.061
AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans nonsense-medi... 36 0.061
AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor wi... 36 0.061
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 32 0.99
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 32 0.99
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 32 0.99
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical pr... 30 4.0
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 29 5.3
Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical pr... 29 5.3
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 29 5.3
U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna replic... 29 7.0
AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical ... 29 7.0
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 29 9.2
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 423 bits (1041), Expect = e-118
Identities = 208/267 (77%), Positives = 224/267 (83%)
Frame = +2
Query: 188 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 367
R Y+ TK+++ Q VA+KSQN+RRLQAQRNELN KVRML+ GSYVGEV K M
Sbjct: 31 RKYFSTKVDDAQQKVADKSQNVRRLQAQRNELNTKVRMLKEELQQLHEQGSYVGEVSKAM 90
Query: 368 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 547
DKKKVLVKVHPEGK+VVD+DK++DIN + RVALR +SY LHK+LPNKVDPLVSLMMV
Sbjct: 91 DKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMV 150
Query: 548 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 727
EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLL+GPPGTGKTLLA
Sbjct: 151 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLA 210
Query: 728 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXX 907
RAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAREHAPSIIFMD
Sbjct: 211 RAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVE 270
Query: 908 XXXXXXXXVQRTMLELLNQLDGFEATK 988
VQRTMLELLNQLDGFEATK
Sbjct: 271 GSSGGDSEVQRTMLELLNQLDGFEATK 297
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 398 bits (981), Expect = e-111
Identities = 196/267 (73%), Positives = 219/267 (82%)
Frame = +2
Query: 188 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 367
RPY+ TK+E+ + VAEKS N+RRL AQ+ ELN KVR+L+ GS+VGEV K M
Sbjct: 26 RPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAM 85
Query: 368 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 547
DKKKVLVK HP+GK++VD+ +VDI+ + A RVALR ++Y +H++LP+KVDPLVSLMMV
Sbjct: 86 DKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMV 145
Query: 548 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 727
EKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA
Sbjct: 146 EKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 205
Query: 728 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXX 907
RAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAREHAPSIIFMD
Sbjct: 206 RAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVE 265
Query: 908 XXXXXXXXVQRTMLELLNQLDGFEATK 988
VQRTMLELLNQLDGFEATK
Sbjct: 266 GSRGGDSEVQRTMLELLNQLDGFEATK 292
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 398 bits (981), Expect = e-111
Identities = 196/267 (73%), Positives = 219/267 (82%)
Frame = +2
Query: 188 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 367
RPY+ TK+E+ + VAEKS N+RRL AQ+ ELN KVR+L+ GS+VGEV K M
Sbjct: 47 RPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAM 106
Query: 368 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 547
DKKKVLVK HP+GK++VD+ +VDI+ + A RVALR ++Y +H++LP+KVDPLVSLMMV
Sbjct: 107 DKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMV 166
Query: 548 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 727
EKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA
Sbjct: 167 EKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 226
Query: 728 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXX 907
RAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAREHAPSIIFMD
Sbjct: 227 RAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVE 286
Query: 908 XXXXXXXXVQRTMLELLNQLDGFEATK 988
VQRTMLELLNQLDGFEATK
Sbjct: 287 GSRGGDSEVQRTMLELLNQLDGFEATK 313
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 213 bits (519), Expect = 3e-55
Identities = 113/262 (43%), Positives = 163/262 (62%), Gaps = 3/262 (1%)
Frame = +2
Query: 206 KIEELQLIVAEKSQNLRRLQAQ---RNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKK 376
+I++ L+ E QN RL+ Q + E AKV LR VG + + +D +
Sbjct: 70 RIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMA-------VGSLEEIIDDQ 122
Query: 377 KVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 556
+V + + V++ VD + C V L ++++ + +L + DP+VS+M +EK
Sbjct: 123 HAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKA 182
Query: 557 PDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 736
P TY VGGLD+QI+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLLA+AV
Sbjct: 183 PQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAV 242
Query: 737 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXXX 916
A+ T TF+R+ GSEL+QK++G+G +MVRELF +A E+APSI+F+D
Sbjct: 243 ANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNS 302
Query: 917 XXXXXVQRTMLELLNQLDGFEA 982
+QRTMLELLNQLDGF++
Sbjct: 303 GGEREIQRTMLELLNQLDGFDS 324
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 208 bits (508), Expect = 6e-54
Identities = 105/201 (52%), Positives = 130/201 (64%)
Frame = +2
Query: 377 KVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 556
+ L+ V KFVVDL +V D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 112 RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEK 171
Query: 557 PDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 736
PD TY VGG QI++++EV+E P+ HPE + LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 172 PDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAV 231
Query: 737 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXXX 916
A+ T+ FIRV GSELVQK++GEG+RMVRELF MAR +IF D
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQ 291
Query: 917 XXXXXVQRTMLELLNQLDGFE 979
VQRTMLEL+NQLDGF+
Sbjct: 292 GGDNEVQRTMLELINQLDGFD 312
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 202 bits (492), Expect = 6e-52
Identities = 101/246 (41%), Positives = 151/246 (61%)
Frame = +2
Query: 245 QNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDL 424
Q L+ L+ + +E+ + G VGEV+K + ++K +VK ++VV
Sbjct: 33 QKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGC 92
Query: 425 DKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIK 604
++++ ++ RV+L + T+ + LP +VDPLV M E + +Y VGGL +QI+
Sbjct: 93 RRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIR 152
Query: 605 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 784
E++EV+ELP+ +PELF +GI PKG LL+GPPGTGKTLLARAVA +C F++V S +
Sbjct: 153 ELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAI 212
Query: 785 VQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXXXXXXXXVQRTMLELLNQ 964
V K+IGE +RM+RE+F AR+H P I+FMD +QRT++ELLNQ
Sbjct: 213 VDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 272
Query: 965 LDGFEA 982
LDGF++
Sbjct: 273 LDGFDS 278
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 202 bits (492), Expect = 6e-52
Identities = 101/246 (41%), Positives = 151/246 (61%)
Frame = +2
Query: 245 QNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDL 424
Q L+ L+ + +E+ + G VGEV+K + ++K +VK ++VV
Sbjct: 41 QKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGC 100
Query: 425 DKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIK 604
++++ ++ RV+L + T+ + LP +VDPLV M E + +Y VGGL +QI+
Sbjct: 101 RRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIR 160
Query: 605 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 784
E++EV+ELP+ +PELF +GI PKG LL+GPPGTGKTLLARAVA +C F++V S +
Sbjct: 161 ELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAI 220
Query: 785 VQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXXXXXXXXVQRTMLELLNQ 964
V K+IGE +RM+RE+F AR+H P I+FMD +QRT++ELLNQ
Sbjct: 221 VDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 280
Query: 965 LDGFEA 982
LDGF++
Sbjct: 281 LDGFDS 286
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 181 bits (441), Expect = 8e-46
Identities = 91/225 (40%), Positives = 138/225 (61%), Gaps = 1/225 (0%)
Frame = +2
Query: 344 VGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVD 523
+G+ ++ +D+ +V + V + +D + C VAL S L +LP + D
Sbjct: 85 IGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEAD 144
Query: 524 PLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 703
+ ++ ++ PD +Y +GGLD Q +E++E +ELP+ H EL+ +GI P+GVL+YGPP
Sbjct: 145 SSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPP 204
Query: 704 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDXXX 883
G GKT+LA+AVA +T +FIRV GSE VQK++GEG RMVR++F +A+E++PSIIF+D
Sbjct: 205 GCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEID 264
Query: 884 XXXXXXXXXXXXXXXXVQRTMLELLNQLDGF-EATKXSSHYGTNK 1015
VQR +LELLNQ+DGF ++T TN+
Sbjct: 265 AIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNR 309
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 177 bits (432), Expect = 1e-44
Identities = 84/160 (52%), Positives = 112/160 (70%)
Frame = +2
Query: 503 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 682
+L +K+D VEK P T++ +GG + QI+E+KE +ELP+ HPE ++ +GI PKG
Sbjct: 160 VLDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKG 219
Query: 683 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSI 862
V+LYG PGTGKTLLA+AVA+ T TFIR +GS+LVQK GEG+R+VR++F MA+E APSI
Sbjct: 220 VILYGEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSI 279
Query: 863 IFMDXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 982
+F+D VQRT+LELLNQLDGFE+
Sbjct: 280 VFIDEIDAVGTKRFDTSSRGEQEVQRTLLELLNQLDGFES 319
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 173 bits (420), Expect = 3e-43
Identities = 86/202 (42%), Positives = 126/202 (62%)
Frame = +2
Query: 374 KKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEK 553
K ++K + + + VD +++ V + +SY + + LP + D V M V++
Sbjct: 111 KCAVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDE 170
Query: 554 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 733
P Y +GG DKQI+E+ E + LP+ H + F LGI PKGVL+YGPPGTGKT++ARA
Sbjct: 171 RPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARA 230
Query: 734 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXX 913
VA T+ TF++++G +LVQ FIG+G+++VR+ F +A+E AP+IIF+D
Sbjct: 231 VAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSE 290
Query: 914 XXXXXXVQRTMLELLNQLDGFE 979
VQRTMLELLNQLDGF+
Sbjct: 291 KAGDREVQRTMLELLNQLDGFQ 312
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 120 bits (288), Expect = 3e-27
Identities = 53/118 (44%), Positives = 82/118 (69%)
Frame = +2
Query: 521 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 700
DP+ E + D Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+GI P+G+LL+GP
Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGP 252
Query: 701 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F ++ P+I+F+D
Sbjct: 253 PGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFID 310
Score = 109 bits (261), Expect = 5e-24
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 3/188 (1%)
Frame = +2
Query: 434 VDINDVTANCRVALRNESYTLH--KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 607
+D+ D + V L + + T+ + K P V + P++T+ +GGL +E
Sbjct: 436 IDLEDDQIDAEV-LNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRE 494
Query: 608 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 787
++E+++ PV+HPE + G+ +GVL YGPPG GKTLLA+A+A+ + FI + G EL+
Sbjct: 495 LQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 554
Query: 788 QKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXXXXXXXXV-QRTMLELLNQ 964
+ GE VR++F AR AP ++F D R + ++L +
Sbjct: 555 TMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTE 614
Query: 965 LDGFEATK 988
+DG A K
Sbjct: 615 MDGMNAKK 622
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 120 bits (288), Expect = 3e-27
Identities = 51/118 (43%), Positives = 83/118 (70%)
Frame = +2
Query: 521 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 700
DP+ E + + Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+G+ P+G+LL+GP
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 701 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F +++P+I+F+D
Sbjct: 252 PGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFID 309
Score = 115 bits (277), Expect = 6e-26
Identities = 60/187 (32%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Frame = +2
Query: 434 VDINDVTANCRVALRNESYTLH--KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 607
+D+ D T + V L + + T+ + K P V + P++T+ +GGL +E
Sbjct: 435 IDLEDDTIDAEV-LNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRE 493
Query: 608 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 787
++E+++ PV+HPE + G+ +GVL YGPPG GKTLLA+A+A+ + FI + G EL+
Sbjct: 494 LQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 553
Query: 788 QKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXXXXXXXXVQRTMLELLNQL 967
+ GE VR++F AR AP ++F D R + ++L ++
Sbjct: 554 TMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEM 613
Query: 968 DGFEATK 988
DG A K
Sbjct: 614 DGMNAKK 620
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 120 bits (288), Expect = 3e-27
Identities = 51/118 (43%), Positives = 83/118 (70%)
Frame = +2
Query: 521 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 700
DP+ E + + Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+G+ P+G+LL+GP
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 701 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F +++P+I+F+D
Sbjct: 252 PGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFID 309
Score = 115 bits (277), Expect = 6e-26
Identities = 60/187 (32%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Frame = +2
Query: 434 VDINDVTANCRVALRNESYTLH--KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 607
+D+ D T + V L + + T+ + K P V + P++T+ +GGL +E
Sbjct: 435 IDLEDDTIDAEV-LNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRE 493
Query: 608 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 787
++E+++ PV+HPE + G+ +GVL YGPPG GKTLLA+A+A+ + FI + G EL+
Sbjct: 494 LQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 553
Query: 788 QKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXXXXXXXXVQRTMLELLNQL 967
+ GE VR++F AR AP ++F D R + ++L ++
Sbjct: 554 TMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEM 613
Query: 968 DGFEATK 988
DG A K
Sbjct: 614 DGMNAKK 620
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 111 bits (268), Expect = 8e-25
Identities = 55/155 (35%), Positives = 86/155 (55%)
Frame = +2
Query: 515 KVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 694
++ P + +VP+ ++ +GG ++ EI++ + P KHPE F+ GI P G+LLY
Sbjct: 440 RIRPTGIRQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLY 499
Query: 695 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
GPPG KTL+ARA+A + F+ V G EL K++G+ + +R+LF AR+ AP+I+F D
Sbjct: 500 GPPGCSKTLIARALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFD 559
Query: 875 XXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 979
R + +LL +LDG E
Sbjct: 560 EIDAVGSSRGSEKSSGVS--DRVLAQLLTELDGLE 592
Score = 30.3 bits (65), Expect = 3.0
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 674 PKGVLLYGPPGTGKTLLARAVA 739
P VL++G PG+GKTLL + VA
Sbjct: 272 PCSVLIWGLPGSGKTLLLKEVA 293
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 105 bits (253), Expect = 5e-23
Identities = 48/99 (48%), Positives = 68/99 (68%)
Frame = +2
Query: 578 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 757
V GL+ K ++E++ LP K P++F + A PKGVLL+GPPGTGKT++ R VA + T
Sbjct: 318 VAGLEGAKKALREIVVLPFKRPDVFTGIR-APPKGVLLFGPPGTGKTMIGRCVASQCKAT 376
Query: 758 FIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
F +S S L K++GEG ++VR LF +AR PS+IF+D
Sbjct: 377 FFNISASSLTSKWVGEGEKLVRALFSVARLKLPSVIFID 415
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 104 bits (250), Expect = 1e-22
Identities = 53/120 (44%), Positives = 82/120 (68%), Gaps = 2/120 (1%)
Frame = +2
Query: 521 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYG 697
D L +++EK P+ + + GL+ + +KE + LP+K P+LF G +P +G+LL+G
Sbjct: 102 DKLSGAIVMEK-PNVKWTDIAGLEGAKEALKEAVILPIKFPQLF--TGNRKPWQGILLFG 158
Query: 698 PPGTGKTLLARAVAHHT-ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
PPGTGK+ +A+AVA E TF +S S+L+ K++GE ++V+ LF +AREH PSIIF+D
Sbjct: 159 PPGTGKSYIAKAVATEAGESTFFSISSSDLMSKWLGESEKLVKNLFALAREHKPSIIFID 218
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 100 bits (240), Expect = 2e-21
Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Frame = +2
Query: 569 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 745
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 746 ----TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXX 913
+ F G++ + K++GE R +R LF A PSIIF D
Sbjct: 450 RRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQ 509
Query: 914 XXXXXXVQRTMLELLNQLDG 973
+ T+L L++ LDG
Sbjct: 510 DQIHASIVSTLLALMDGLDG 529
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 100 bits (240), Expect = 2e-21
Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Frame = +2
Query: 569 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 745
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 447
Query: 746 ----TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXX 913
+ F G++ + K++GE R +R LF A PSIIF D
Sbjct: 448 RRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQ 507
Query: 914 XXXXXXVQRTMLELLNQLDG 973
+ T+L L++ LDG
Sbjct: 508 DQIHASIVSTLLALMDGLDG 527
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 100 bits (240), Expect = 2e-21
Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Frame = +2
Query: 569 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 745
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 746 ----TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXX 913
+ F G++ + K++GE R +R LF A PSIIF D
Sbjct: 450 RRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQ 509
Query: 914 XXXXXXVQRTMLELLNQLDG 973
+ T+L L++ LDG
Sbjct: 510 DQIHASIVSTLLALMDGLDG 529
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 100 bits (240), Expect = 2e-21
Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Frame = +2
Query: 569 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 745
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 746 ----TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXX 913
+ F G++ + K++GE R +R LF A PSIIF D
Sbjct: 450 RRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQ 509
Query: 914 XXXXXXVQRTMLELLNQLDG 973
+ T+L L++ LDG
Sbjct: 510 DQIHASIVSTLLALMDGLDG 529
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 100 bits (240), Expect = 2e-21
Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Frame = +2
Query: 569 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 745
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 447
Query: 746 ----TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXX 913
+ F G++ + K++GE R +R LF A PSIIF D
Sbjct: 448 RRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQ 507
Query: 914 XXXXXXVQRTMLELLNQLDG 973
+ T+L L++ LDG
Sbjct: 508 DQIHASIVSTLLALMDGLDG 527
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 100 bits (240), Expect = 2e-21
Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Frame = +2
Query: 569 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 745
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 746 ----TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXX 913
+ F G++ + K++GE R +R LF A PSIIF D
Sbjct: 450 RRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQ 509
Query: 914 XXXXXXVQRTMLELLNQLDG 973
+ T+L L++ LDG
Sbjct: 510 DQIHASIVSTLLALMDGLDG 529
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 100 bits (240), Expect = 2e-21
Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Frame = +2
Query: 569 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 745
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 746 ----TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXX 913
+ F G++ + K++GE R +R LF A PSIIF D
Sbjct: 450 RRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQ 509
Query: 914 XXXXXXVQRTMLELLNQLDG 973
+ T+L L++ LDG
Sbjct: 510 DQIHASIVSTLLALMDGLDG 529
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 100 bits (239), Expect = 2e-21
Identities = 50/108 (46%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Frame = +2
Query: 554 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI-AQPKGVLLYGPPGTGKTLLAR 730
VPD +++ +G L + K+++ I P+K + F ALGI +P+G+LL GPPG GKTLLA+
Sbjct: 527 VPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAK 586
Query: 731 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
AVA+ T FI V G EL+ ++GE R VR +F AR+ P +IF D
Sbjct: 587 AVANETGMNFISVKGPELLNMYVGESERAVRTVFQRARDSQPCVIFFD 634
Score = 81.4 bits (192), Expect = 1e-15
Identities = 36/102 (35%), Positives = 63/102 (61%)
Frame = +2
Query: 569 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 748
+E +GG D+Q E+ + + +K P+ F LG+ P+G +++GPPG GKT+ A+AVA
Sbjct: 205 FEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGEL 263
Query: 749 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
++++ +ELV GE +R LF A++++P I+ +D
Sbjct: 264 AIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILD 305
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 99.1 bits (236), Expect = 6e-21
Identities = 52/130 (40%), Positives = 77/130 (59%)
Frame = +2
Query: 587 LDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 766
+D+ E++E+++ +K PE + LG PKGVLL GPPGTGKTLLARA+A + F
Sbjct: 206 MDEAKLEVEEIVDY-LKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFH 264
Query: 767 VSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXXXXXXXXVQRTM 946
+GSE + +G+G+R VR+LF A+ AP IIF+D +T+
Sbjct: 265 TAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFID--EIDSVGSKRVSNSIHPYANQTI 322
Query: 947 LELLNQLDGF 976
+LL+++DGF
Sbjct: 323 NQLLSEMDGF 332
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 98.7 bits (235), Expect = 8e-21
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Frame = +2
Query: 554 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI-AQPKGVLLYGPPGTGKTLLAR 730
VPD +++ +G L + K+++ I P+K + F ALGI +P+G+LL GPPG GKTLLA+
Sbjct: 527 VPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAK 586
Query: 731 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
AVA+ T F V G EL+ ++GE R VR +F AR+ P +IF D
Sbjct: 587 AVANETGMNFFSVKGPELLNMYVGESERAVRTVFQRARDSQPCVIFFD 634
Score = 81.4 bits (192), Expect = 1e-15
Identities = 36/102 (35%), Positives = 63/102 (61%)
Frame = +2
Query: 569 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 748
+E +GG D+Q E+ + + +K P+ F LG+ P+G +++GPPG GKT+ A+AVA
Sbjct: 205 FEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGEL 263
Query: 749 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
++++ +ELV GE +R LF A++++P I+ +D
Sbjct: 264 AIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILD 305
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 97.5 bits (232), Expect = 2e-20
Identities = 54/140 (38%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Frame = +2
Query: 578 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 757
V G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 295 VAGCEEAKIEIMEFVNF-LKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVP 353
Query: 758 FIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXXXXXXXXVQ 937
FI VSGSE ++ F+G G VR++F MAR+++P I+F+D Q
Sbjct: 354 FITVSGSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDEIDAVGRKRGGKGGMGGHSEQ 413
Query: 938 -RTMLELLNQLDGFEATKXS 994
T+ +LL ++DGF + S
Sbjct: 414 ENTLNQLLVEMDGFTTDESS 433
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical protein
C11H1.4a protein.
Length = 996
Score = 95.9 bits (228), Expect = 5e-20
Identities = 53/138 (38%), Positives = 77/138 (55%)
Frame = +2
Query: 566 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 745
T E VGG+ +Q K +++VI P K+P+LF+++G+ KG+LL+GP G GKTLLA A +
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISN 785
Query: 746 TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXXXXXX 925
+ + + V G EL+ K+IG VR +F AR AP I+F D
Sbjct: 786 SNFSVVNVKGPELLSKYIGASEENVRLVFEKARSCAPCILFFD---ELDSLAPKRGHDST 842
Query: 926 XXVQRTMLELLNQLDGFE 979
R + +LL +LDG E
Sbjct: 843 GVTDRVVNQLLTELDGAE 860
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 95.9 bits (228), Expect = 5e-20
Identities = 52/127 (40%), Positives = 78/127 (61%), Gaps = 4/127 (3%)
Frame = +2
Query: 506 LPNKVDPLVSLMMVEKVPDST---YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP 676
L N VD ++ ++++V D+T + V G ++E + LP +P LF G+ QP
Sbjct: 153 LLNGVDKVIGERLLDEVLDNTGVRMDDVAGCHSAKAALEEAVILPALNPNLFK--GLRQP 210
Query: 677 -KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHA 853
KG+LL+GPPG GKTLLA+AVA ++ F +S S L K++G+ + +R LF +AR
Sbjct: 211 VKGILLFGPPGNGKTLLAKAVAGESKQMFFNISASSLTSKWVGDSEKTIRGLFQIARNAQ 270
Query: 854 PSIIFMD 874
PSIIF+D
Sbjct: 271 PSIIFID 277
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 95.9 bits (228), Expect = 5e-20
Identities = 53/138 (38%), Positives = 77/138 (55%)
Frame = +2
Query: 566 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 745
T E VGG+ +Q K +++VI P K+P+LF+++G+ KG+LL+GP G GKTLLA A +
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISN 785
Query: 746 TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXXXXXX 925
+ + + V G EL+ K+IG VR +F AR AP I+F D
Sbjct: 786 SNFSVVNVKGPELLSKYIGASEENVRLVFEKARSCAPCILFFD---ELDSLAPKRGHDST 842
Query: 926 XXVQRTMLELLNQLDGFE 979
R + +LL +LDG E
Sbjct: 843 GVTDRVVNQLLTELDGAE 860
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 94.3 bits (224), Expect = 2e-19
Identities = 52/136 (38%), Positives = 76/136 (55%)
Frame = +2
Query: 572 EMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 751
E VGG+ +Q K +++VI P K+P+LF+++G+ KG+LL+GP G GKTLLA A ++
Sbjct: 2 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSN 61
Query: 752 CTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDXXXXXXXXXXXXXXXXXXX 931
+ + V G EL+ K+IG VR +F AR AP I+F D
Sbjct: 62 FSVVNVKGPELLSKYIGASEENVRLVFEKARSCAPCILFFD---ELDSLAPKRGHDSTGV 118
Query: 932 VQRTMLELLNQLDGFE 979
R + +LL +LDG E
Sbjct: 119 TDRVVNQLLTELDGAE 134
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 89.0 bits (211), Expect = 6e-18
Identities = 40/102 (39%), Positives = 66/102 (64%)
Frame = +2
Query: 569 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 748
++ +GG ++ + E+K+ I LP++ + ++ P+G+LLYGPPG GKTLLA+AVA
Sbjct: 79 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAA 138
Query: 749 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
C FI + S L K+ GE ++ +F +A++ P+IIF+D
Sbjct: 139 GCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFID 180
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 89.0 bits (211), Expect = 6e-18
Identities = 40/102 (39%), Positives = 66/102 (64%)
Frame = +2
Query: 569 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 748
++ +GG ++ + E+K+ I LP++ + ++ P+G+LLYGPPG GKTLLA+AVA
Sbjct: 82 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAA 141
Query: 749 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
C FI + S L K+ GE ++ +F +A++ P+IIF+D
Sbjct: 142 GCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFID 183
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 85.4 bits (202), Expect = 8e-17
Identities = 47/103 (45%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
Frame = +2
Query: 572 EMVGGLD-KQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARAVAHH 745
+++G D KQ+ + E + LP+ PE F G+ P K ++L GPPGTGKTL+ARA+A
Sbjct: 194 DIIGMHDVKQV--LHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIASE 249
Query: 746 TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
+ TF VS ++L K+ G+ ++VR LF +AR +APSIIF+D
Sbjct: 250 SSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFID 292
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 85.4 bits (202), Expect = 8e-17
Identities = 47/103 (45%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
Frame = +2
Query: 572 EMVGGLD-KQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARAVAHH 745
+++G D KQ+ + E + LP+ PE F G+ P K ++L GPPGTGKTL+ARA+A
Sbjct: 194 DIIGMHDVKQV--LHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIASE 249
Query: 746 TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
+ TF VS ++L K+ G+ ++VR LF +AR +APSIIF+D
Sbjct: 250 SSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFID 292
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 85.4 bits (202), Expect = 8e-17
Identities = 47/103 (45%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
Frame = +2
Query: 572 EMVGGLD-KQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARAVAHH 745
+++G D KQ+ + E + LP+ PE F G+ P K ++L GPPGTGKTL+ARA+A
Sbjct: 194 DIIGMHDVKQV--LHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIASE 249
Query: 746 TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
+ TF VS ++L K+ G+ ++VR LF +AR +APSIIF+D
Sbjct: 250 SSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFID 292
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 83.4 bits (197), Expect = 3e-16
Identities = 44/102 (43%), Positives = 63/102 (61%)
Frame = +2
Query: 569 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 748
++ V G + EI+E ++ +K+P F LG P+G LL GPPG GKTLLA+A+A +
Sbjct: 284 FKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAES 342
Query: 749 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
FI ++GSE V+ G G+ +R LF AR AP II++D
Sbjct: 343 TVPFISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIYID 384
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 83.4 bits (197), Expect = 3e-16
Identities = 44/102 (43%), Positives = 63/102 (61%)
Frame = +2
Query: 569 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 748
++ V G + EI+E ++ +K+P F LG P+G LL GPPG GKTLLA+A+A +
Sbjct: 284 FKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAES 342
Query: 749 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
FI ++GSE V+ G G+ +R LF AR AP II++D
Sbjct: 343 TVPFISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIYID 384
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 78.2 bits (184), Expect = 1e-14
Identities = 39/108 (36%), Positives = 66/108 (61%)
Frame = +2
Query: 551 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 730
K+P+ +E VGGL++ + + E I LF + + + G++LYG PG GKTL+A+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRT-----NLFGSRALKR-SGIILYGSPGCGKTLIAK 511
Query: 731 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
AVA + F+ V G EL+ K++G+ +R++F A++ +P +IF D
Sbjct: 512 AVATEFKIAFLSVKGPELLNKYVGQSEENLRKVFERAKQASPCVIFFD 559
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 78.2 bits (184), Expect = 1e-14
Identities = 39/108 (36%), Positives = 66/108 (61%)
Frame = +2
Query: 551 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 730
K+P+ +E VGGL++ + + E I LF + + + G++LYG PG GKTL+A+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRT-----NLFGSRALKR-SGIILYGSPGCGKTLIAK 511
Query: 731 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
AVA + F+ V G EL+ K++G+ +R++F A++ +P +IF D
Sbjct: 512 AVATEFKIAFLSVKGPELLNKYVGQSEENLRKVFERAKQASPCVIFFD 559
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 78.2 bits (184), Expect = 1e-14
Identities = 39/108 (36%), Positives = 66/108 (61%)
Frame = +2
Query: 551 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 730
K+P+ +E VGGL++ + + E I LF + + + G++LYG PG GKTL+A+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRT-----NLFGSRALKR-SGIILYGSPGCGKTLIAK 511
Query: 731 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 874
AVA + F+ V G EL+ K++G+ +R++F A++ +P +IF D
Sbjct: 512 AVATEFKIAFLSVKGPELLNKYVGQSEENLRKVFERAKQASPCVIFFD 559
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 69.7 bits (163), Expect = 4e-12
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Frame = +2
Query: 557 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 727
PD ++ +GGLD + I + V PE + LG+ +G+LL+GPPGTGKTL+A
Sbjct: 288 PDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMA 347
Query: 728 RAVAHHTECTFIR-VSGSELVQKFIGEGSRMVRELFVMARE 847
R + + V+G +++ K++GE VR+LF A E
Sbjct: 348 RQIGKMLNAREPKIVNGPQILDKYVGESESNVRKLFADAEE 388
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 69.7 bits (163), Expect = 4e-12
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Frame = +2
Query: 557 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 727
PD ++ +GGLD + I + V PE + LG+ +G+LL+GPPGTGKTL+A
Sbjct: 288 PDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMA 347
Query: 728 RAVAHHTECTFIR-VSGSELVQKFIGEGSRMVRELFVMARE 847
R + + V+G +++ K++GE VR+LF A E
Sbjct: 348 RQIGKMLNAREPKIVNGPQILDKYVGESESNVRKLFADAEE 388
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 69.7 bits (163), Expect = 4e-12
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Frame = +2
Query: 557 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 727
PD ++ +GGLD + I + V PE + LG+ +G+LL+GPPGTGKTL+A
Sbjct: 222 PDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMA 281
Query: 728 RAVAHHTECTFIR-VSGSELVQKFIGEGSRMVRELFVMARE 847
R + + V+G +++ K++GE VR+LF A E
Sbjct: 282 RQIGKMLNAREPKIVNGPQILDKYVGESESNVRKLFADAEE 322
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 43.6 bits (98), Expect = 3e-04
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +2
Query: 677 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIG-EGSRMVRELFVMA-REH 850
+ V+ YGPPGTGKTL A+++A H+ + ++G ++ +G +G + ++F A +
Sbjct: 343 RNVMFYGPPGTGKTLFAKSLAQHSGLDYAVLTGGDIAP--LGRDGVSAIHKVFDWASKSR 400
Query: 851 APSIIFMD 874
I+F+D
Sbjct: 401 KGLIVFID 408
>Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical
protein F10B5.5 protein.
Length = 424
Score = 37.9 bits (84), Expect = 0.015
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 9/59 (15%)
Frame = +2
Query: 683 VLLYGPPGTGKTLLARAVAHH---------TECTFIRVSGSELVQKFIGEGSRMVRELF 832
+LL GPPGTGKT L + +A H ++ + ++ L K+ E ++V+++F
Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQKMF 233
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 35.9 bits (79), Expect = 0.061
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 662 GIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 781
G+ +G L YGPPGTGK+ A+A H + +S SE
Sbjct: 193 GVPYRRGYLFYGPPGTGKSSFISALASHFGYSVCLLSLSE 232
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 35.9 bits (79), Expect = 0.061
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 662 GIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 781
G+ +G L YGPPGTGK+ A+A H + +S SE
Sbjct: 239 GVPYRRGYLFYGPPGTGKSSFISALASHFGYSVCLLSLSE 278
>AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans
nonsense-mediated mRNA decay trans-acting factor
protein.
Length = 1069
Score = 35.9 bits (79), Expect = 0.061
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Frame = +2
Query: 686 LLYGPPGTGKTLLARAVAHH----TE-----CTFIRVSGSELVQKFIGEGSRMVRELFVM 838
L+ GPPGTGKT+++ + +H TE C+ ++ L +K G ++VR L
Sbjct: 464 LIQGPPGTGKTVVSATIVYHLVQKTEGNVLVCSPSNIAVDHLAEKIHKTGLKVVR-LCAR 522
Query: 839 AREHAPSII 865
+REH+ + +
Sbjct: 523 SREHSETTV 531
>AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 2 protein.
Length = 1069
Score = 35.9 bits (79), Expect = 0.061
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Frame = +2
Query: 686 LLYGPPGTGKTLLARAVAHH----TE-----CTFIRVSGSELVQKFIGEGSRMVRELFVM 838
L+ GPPGTGKT+++ + +H TE C+ ++ L +K G ++VR L
Sbjct: 464 LIQGPPGTGKTVVSATIVYHLVQKTEGNVLVCSPSNIAVDHLAEKIHKTGLKVVR-LCAR 522
Query: 839 AREHAPSII 865
+REH+ + +
Sbjct: 523 SREHSETTV 531
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 31.9 bits (69), Expect = 0.99
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 632 VKHPELFDALGIAQPKGVLLYGPPGTGKTL-LARAVAHHTECTFIRVSGS 778
V+H E+ A +A+ K ++L GPPG+GKT+ L A+ E + V+ S
Sbjct: 2517 VRH-EMLLAAWLAEHKPLVLCGPPGSGKTMTLLAALRSQQEMEVVNVNFS 2565
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 31.9 bits (69), Expect = 0.99
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 632 VKHPELFDALGIAQPKGVLLYGPPGTGKTL-LARAVAHHTECTFIRVSGS 778
V+H E+ A +A+ K ++L GPPG+GKT+ L A+ E + V+ S
Sbjct: 2517 VRH-EMLLAAWLAEHKPLVLCGPPGSGKTMTLLAALRSQQEMEVVNVNFS 2565
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 31.9 bits (69), Expect = 0.99
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 677 KGVLLY--GPPGTGKTLLARAVAHHTECTFIRVS 772
KG++L GPPG GKT +A+A+A F RVS
Sbjct: 328 KGMILCFTGPPGIGKTSIAKAIAESMGRKFQRVS 361
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 30.3 bits (65), Expect = 3.0
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 677 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 781
K +LL GP G GK+ LAR VA + I V+ S+
Sbjct: 331 KMLLLSGPAGLGKSTLARIVARQAGYSTIDVNASD 365
>Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical
protein E02H1.6 protein.
Length = 182
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 683 VLLYGPPGTGKTLLARAVAHHTECTFIRVS 772
+L+ G PGTGK+ L + VA FI VS
Sbjct: 12 ILVTGSPGTGKSTLGQQVAEKLGFVFIEVS 41
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
C47E8.8 protein.
Length = 1675
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 825 SRTILLPSPINFCTNSDPETRMKVHSVW*ATARANNVFPVP 703
SRTI + P +F +NS+PE ++ + + + A++V P P
Sbjct: 1030 SRTIKVEEPTDFPSNSEPEAQIPLETRTLEPSEASSVQPEP 1070
>Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical
protein F36A2.9b protein.
Length = 565
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 347 GEVVKPMDKKKVLVKVHPEGKFVVDLDKN 433
G VV +D+K + + H EGKF+VD + N
Sbjct: 16 GSVVPNVDQKILRGEFHDEGKFMVDYEDN 44
>Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical
protein F36A2.9a protein.
Length = 528
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 347 GEVVKPMDKKKVLVKVHPEGKFVVDLDKN 433
G VV +D+K + + H EGKF+VD + N
Sbjct: 16 GSVVPNVDQKILRGEFHDEGKFMVDYEDN 44
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 825 SRTILLPSPINFCTNSDPETRMKVHSVW*ATARANNVFPVP 703
SRTI + P +F +NS+PE ++ + + + A++V P P
Sbjct: 1030 SRTIKVEEPTDFPSNSEPEAQIPLETRTLEPSEASSVQPEP 1070
>Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical
protein D2030.2b protein.
Length = 470
Score = 29.5 bits (63), Expect = 5.3
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 671 QPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQK-FIGEGSRMVRELFVMA 841
+ VLL GP G GKT L + +A + + + Q ++GE V + V A
Sbjct: 140 EKSNVLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGYVGEDVESVIQKLVQA 197
>Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical
protein D2030.2a protein.
Length = 586
Score = 29.5 bits (63), Expect = 5.3
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 671 QPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQK-FIGEGSRMVRELFVMA 841
+ VLL GP G GKT L + +A + + + Q ++GE V + V A
Sbjct: 256 EKSNVLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGYVGEDVESVIQKLVQA 313
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 683 VLLYGPPGTGKTLLARAVA 739
+L YGPPGTGKT A A
Sbjct: 65 LLFYGPPGTGKTTTVLAAA 83
>U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 4 protein.
Length = 334
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 683 VLLYGPPGTGKTLLARA 733
+L YGPPGTGKT A A
Sbjct: 51 LLFYGPPGTGKTSAALA 67
>AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical
protein C30F12.2 protein.
Length = 445
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 653 DALGIAQPKGVLLYGPPGTGKTLL 724
D I P+G+ LYG G GKT+L
Sbjct: 83 DTPKIISPRGIYLYGSVGCGKTML 106
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 28.7 bits (61), Expect = 9.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 677 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVS 772
K + +GPPG GKT +A+++A + R S
Sbjct: 506 KILCFHGPPGVGKTSIAKSIATALNREYFRFS 537
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,391,478
Number of Sequences: 27780
Number of extensions: 443065
Number of successful extensions: 1357
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 1204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1333
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3526846804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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