Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_C21
(1259 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 35 0.11
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 35 0.11
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 34 0.18
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 34 0.18
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 34 0.18
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 34 0.18
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 34 0.18
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 34 0.18
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 33 0.32
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 33 0.43
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 33 0.43
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 33 0.43
Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical p... 32 0.47
Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical pr... 33 0.56
U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protei... 33 0.56
U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protei... 32 0.75
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 32 0.75
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 32 0.75
U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter... 31 1.3
U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter... 31 1.3
U40937-1|AAA81693.1| 396|Caenorhabditis elegans Collagen protei... 31 1.3
L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein. 31 1.3
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 31 1.3
AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen prot... 31 1.3
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 31 1.7
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 31 1.7
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 31 1.7
U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter... 31 1.7
L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein. 31 1.7
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 31 1.7
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 31 1.7
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 31 1.7
Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical pr... 30 3.0
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 30 3.0
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 30 4.0
Z69662-1|CAA93499.1| 359|Caenorhabditis elegans Hypothetical pr... 30 4.0
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 30 4.0
M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein. 30 4.0
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical pr... 29 5.3
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 5.3
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 5.3
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 29 5.3
AF039720-3|AAB96697.1| 281|Caenorhabditis elegans Collagen prot... 29 5.3
Z81567-3|CAB04587.1| 301|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 29 6.9
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 6.9
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 29 6.9
AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen prot... 29 6.9
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 29 6.9
Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical pr... 29 9.2
Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical pr... 29 9.2
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 9.2
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 29 9.2
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 35.1 bits (77), Expect = 0.11
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +1
Query: 385 DAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 546
DAG GE G G PGPPG ++ E G +R + PA P P
Sbjct: 129 DAGSPGEAGGAGPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGP 182
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 35.1 bits (77), Expect = 0.11
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +1
Query: 385 DAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 546
DAG GE G G PGPPG ++ E G +R + PA P P
Sbjct: 129 DAGSPGEAGGAGPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGP 182
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 34.3 bits (75), Expect = 0.18
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 388 AGLKGEKGDRGHPGPPGICECKPTDNSENERGD 486
AG GEKGD G PG PG+ D E+GD
Sbjct: 163 AGAPGEKGDGGMPGMPGLPGPSGRDGYPGEKGD 195
Score = 33.5 bits (73), Expect = 0.32
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK-TTCSNVP 528
PG P + + G KG+KGD G PG PG+ +G+ R + + +P
Sbjct: 404 PGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTPGQSIPGLP 463
Query: 529 ASDPKP 546
D KP
Sbjct: 464 GKDGKP 469
Score = 33.1 bits (72), Expect = 0.43
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGI 441
PG P + GL G KGD G PGPPG+
Sbjct: 746 PGRPGEVGQPGFPGLPGMKGDSGLPGPPGL 775
Score = 32.7 bits (71), Expect = 0.56
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
PG P K D+GL G G GHPG PG
Sbjct: 755 PGFPGLPGMKGDSGLPGPPGLPGHPGVPG 783
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Frame = +1
Query: 352 PGGPDFISCKIDAGL------KGEKGDRGHPGPPGI 441
PG P F K DAGL G +G RG PG PG+
Sbjct: 826 PGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPGAPGL 861
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
+PG P + D GL G G G PGPPG
Sbjct: 563 LPGMPGPVGDAGDDGLPGPAGRPGSPGPPG 592
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGE---KGDRGHPGPPGI 441
+PG P + K +AG+ G KGD G PG PG+
Sbjct: 939 LPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGL 972
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGI 441
PG P + K DAGL G G G G PG+
Sbjct: 646 PGAPGYPGEKGDAGLPGLSGKPGQDGLPGL 675
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPGI 441
+PG F G+ G KGD G+PG PG+
Sbjct: 781 VPGDKGFGGVPGLPGIPGPKGDVGNPGLPGL 811
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
+PG P K D G G+ G G PG PG
Sbjct: 915 LPGLPGVTGLKGDLGAPGQSGAPGLPGAPG 944
Score = 28.7 bits (61), Expect = 9.2
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +1
Query: 343 YFIPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
Y PG P F K D GL G G G G PG
Sbjct: 684 YGQPGQPGFPGAKGDGGLPGLPGTPGLQGMPG 715
Score = 28.7 bits (61), Expect = 9.2
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
+ G P + K DAGL G G G PG PG
Sbjct: 870 LSGQPGYPGEKGDAGLPGVPGREGSPGFPG 899
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 34.3 bits (75), Expect = 0.18
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 388 AGLKGEKGDRGHPGPPGICECKPTDNSENERGD 486
AG GEKGD G PG PG+ D E+GD
Sbjct: 163 AGAPGEKGDGGMPGMPGLPGPSGRDGYPGEKGD 195
Score = 33.5 bits (73), Expect = 0.32
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK-TTCSNVP 528
PG P + + G KG+KGD G PG PG+ +G+ R + + +P
Sbjct: 403 PGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTPGQSIPGLP 462
Query: 529 ASDPKP 546
D KP
Sbjct: 463 GKDGKP 468
Score = 33.1 bits (72), Expect = 0.43
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGI 441
PG P + GL G KGD G PGPPG+
Sbjct: 745 PGRPGEVGQPGFPGLPGMKGDSGLPGPPGL 774
Score = 32.7 bits (71), Expect = 0.56
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
PG P K D+GL G G GHPG PG
Sbjct: 754 PGFPGLPGMKGDSGLPGPPGLPGHPGVPG 782
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Frame = +1
Query: 352 PGGPDFISCKIDAGL------KGEKGDRGHPGPPGI 441
PG P F K DAGL G +G RG PG PG+
Sbjct: 825 PGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPGAPGL 860
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
+PG P + D GL G G G PGPPG
Sbjct: 562 LPGMPGPVGDAGDDGLPGPAGRPGSPGPPG 591
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGE---KGDRGHPGPPGI 441
+PG P + K +AG+ G KGD G PG PG+
Sbjct: 938 LPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGL 971
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGI 441
PG P + K DAGL G G G G PG+
Sbjct: 645 PGAPGYPGEKGDAGLPGLSGKPGQDGLPGL 674
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPGI 441
+PG F G+ G KGD G+PG PG+
Sbjct: 780 VPGDKGFGGVPGLPGIPGPKGDVGNPGLPGL 810
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
+PG P K D G G+ G G PG PG
Sbjct: 914 LPGLPGVTGLKGDLGAPGQSGAPGLPGAPG 943
Score = 28.7 bits (61), Expect = 9.2
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +1
Query: 343 YFIPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
Y PG P F K D GL G G G G PG
Sbjct: 683 YGQPGQPGFPGAKGDGGLPGLPGTPGLQGMPG 714
Score = 28.7 bits (61), Expect = 9.2
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
+ G P + K DAGL G G G PG PG
Sbjct: 869 LSGQPGYPGEKGDAGLPGVPGREGSPGFPG 898
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 34.3 bits (75), Expect = 0.18
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 388 AGLKGEKGDRGHPGPPGICECKPTDNSENERGD 486
AG GEKGD G PG PG+ D E+GD
Sbjct: 163 AGAPGEKGDGGMPGMPGLPGPSGRDGYPGEKGD 195
Score = 33.5 bits (73), Expect = 0.32
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK-TTCSNVP 528
PG P + + G KG+KGD G PG PG+ +G+ R + + +P
Sbjct: 403 PGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTPGQSIPGLP 462
Query: 529 ASDPKP 546
D KP
Sbjct: 463 GKDGKP 468
Score = 33.1 bits (72), Expect = 0.43
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGI 441
PG P + GL G KGD G PGPPG+
Sbjct: 745 PGRPGEVGQPGFPGLPGMKGDSGLPGPPGL 774
Score = 32.7 bits (71), Expect = 0.56
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
PG P K D+GL G G GHPG PG
Sbjct: 754 PGFPGLPGMKGDSGLPGPPGLPGHPGVPG 782
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Frame = +1
Query: 352 PGGPDFISCKIDAGL------KGEKGDRGHPGPPGI 441
PG P F K DAGL G +G RG PG PG+
Sbjct: 825 PGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPGAPGL 860
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
+PG P + D GL G G G PGPPG
Sbjct: 562 LPGMPGPVGDAGDDGLPGPAGRPGSPGPPG 591
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGE---KGDRGHPGPPGI 441
+PG P + K +AG+ G KGD G PG PG+
Sbjct: 938 LPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGL 971
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGI 441
PG P + K DAGL G G G G PG+
Sbjct: 645 PGAPGYPGEKGDAGLPGLSGKPGQDGLPGL 674
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPGI 441
+PG F G+ G KGD G+PG PG+
Sbjct: 780 VPGDKGFGGVPGLPGIPGPKGDVGNPGLPGL 810
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
+PG P K D G G+ G G PG PG
Sbjct: 914 LPGLPGVTGLKGDLGAPGQSGAPGLPGAPG 943
Score = 28.7 bits (61), Expect = 9.2
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +1
Query: 343 YFIPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
Y PG P F K D GL G G G G PG
Sbjct: 683 YGQPGQPGFPGAKGDGGLPGLPGTPGLQGMPG 714
Score = 28.7 bits (61), Expect = 9.2
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
+ G P + K DAGL G G G PG PG
Sbjct: 869 LSGQPGYPGEKGDAGLPGVPGREGSPGFPG 898
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 34.3 bits (75), Expect = 0.18
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 388 AGLKGEKGDRGHPGPPGICECKPTDNSENERGD 486
AG GEKGD G PG PG+ D E+GD
Sbjct: 163 AGAPGEKGDGGMPGMPGLPGPSGRDGYPGEKGD 195
Score = 33.5 bits (73), Expect = 0.32
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK-TTCSNVP 528
PG P + + G KG+KGD G PG PG+ +G+ R + + +P
Sbjct: 404 PGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTPGQSIPGLP 463
Query: 529 ASDPKP 546
D KP
Sbjct: 464 GKDGKP 469
Score = 33.1 bits (72), Expect = 0.43
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGI 441
PG P + GL G KGD G PGPPG+
Sbjct: 746 PGRPGEVGQPGFPGLPGMKGDSGLPGPPGL 775
Score = 32.7 bits (71), Expect = 0.56
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
PG P K D+GL G G GHPG PG
Sbjct: 755 PGFPGLPGMKGDSGLPGPPGLPGHPGVPG 783
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Frame = +1
Query: 352 PGGPDFISCKIDAGL------KGEKGDRGHPGPPGI 441
PG P F K DAGL G +G RG PG PG+
Sbjct: 826 PGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPGAPGL 861
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
+PG P + D GL G G G PGPPG
Sbjct: 563 LPGMPGPVGDAGDDGLPGPAGRPGSPGPPG 592
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGE---KGDRGHPGPPGI 441
+PG P + K +AG+ G KGD G PG PG+
Sbjct: 939 LPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGL 972
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGI 441
PG P + K DAGL G G G G PG+
Sbjct: 646 PGAPGYPGEKGDAGLPGLSGKPGQDGLPGL 675
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPGI 441
+PG F G+ G KGD G+PG PG+
Sbjct: 781 VPGDKGFGGVPGLPGIPGPKGDVGNPGLPGL 811
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
+PG P K D G G+ G G PG PG
Sbjct: 915 LPGLPGVTGLKGDLGAPGQSGAPGLPGAPG 944
Score = 28.7 bits (61), Expect = 9.2
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +1
Query: 343 YFIPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
Y PG P F K D GL G G G G PG
Sbjct: 684 YGQPGQPGFPGAKGDGGLPGLPGTPGLQGMPG 715
Score = 28.7 bits (61), Expect = 9.2
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
+ G P + K DAGL G G G PG PG
Sbjct: 870 LSGQPGYPGEKGDAGLPGVPGREGSPGFPG 899
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 34.3 bits (75), Expect = 0.18
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 388 AGLKGEKGDRGHPGPPGICECKPTDNSENERGD 486
AG GEKGD G PG PG+ D E+GD
Sbjct: 163 AGAPGEKGDGGMPGMPGLPGPSGRDGYPGEKGD 195
Score = 33.5 bits (73), Expect = 0.32
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK-TTCSNVP 528
PG P + + G KG+KGD G PG PG+ +G+ R + + +P
Sbjct: 440 PGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTPGQSIPGLP 499
Query: 529 ASDPKP 546
D KP
Sbjct: 500 GKDGKP 505
Score = 33.1 bits (72), Expect = 0.43
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGI 441
PG P + GL G KGD G PGPPG+
Sbjct: 782 PGRPGEVGQPGFPGLPGMKGDSGLPGPPGL 811
Score = 32.7 bits (71), Expect = 0.56
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
PG P K D+GL G G GHPG PG
Sbjct: 791 PGFPGLPGMKGDSGLPGPPGLPGHPGVPG 819
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Frame = +1
Query: 352 PGGPDFISCKIDAGL------KGEKGDRGHPGPPGI 441
PG P F K DAGL G +G RG PG PG+
Sbjct: 862 PGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPGAPGL 897
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
+PG P + D GL G G G PGPPG
Sbjct: 599 LPGMPGPVGDAGDDGLPGPAGRPGSPGPPG 628
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGE---KGDRGHPGPPGI 441
+PG P + K +AG+ G KGD G PG PG+
Sbjct: 975 LPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGL 1008
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGI 441
PG P + K DAGL G G G G PG+
Sbjct: 682 PGAPGYPGEKGDAGLPGLSGKPGQDGLPGL 711
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPGI 441
+PG F G+ G KGD G+PG PG+
Sbjct: 817 VPGDKGFGGVPGLPGIPGPKGDVGNPGLPGL 847
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
+PG P K D G G+ G G PG PG
Sbjct: 951 LPGLPGVTGLKGDLGAPGQSGAPGLPGAPG 980
Score = 28.7 bits (61), Expect = 9.2
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGH---PGPPGICECKPTDNSENERGDSASRPSKTTCSN 522
PG P S G KG+ GD G PGPPG E + + RG+ + K
Sbjct: 214 PGNPGIGSI----GPKGDPGDLGSVGPPGPPGPREFTGSGSIVGPRGNPGEKGDKGDIGA 269
Query: 523 V-PASDPKP 546
+ PA P P
Sbjct: 270 MGPAGPPGP 278
Score = 28.7 bits (61), Expect = 9.2
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +1
Query: 343 YFIPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
Y PG P F K D GL G G G G PG
Sbjct: 720 YGQPGQPGFPGAKGDGGLPGLPGTPGLQGMPG 751
Score = 28.7 bits (61), Expect = 9.2
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
+ G P + K DAGL G G G PG PG
Sbjct: 906 LSGQPGYPGEKGDAGLPGVPGREGSPGFPG 935
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 34.3 bits (75), Expect = 0.18
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +1
Query: 355 GGPDFISCKIDAGLKGEKGDRGHPGPPG 438
G P DAG+ GE G RG PGPPG
Sbjct: 229 GSPGQDGSNGDAGVAGEPGQRGPPGPPG 256
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 33.5 bits (73), Expect = 0.32
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +1
Query: 385 DAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 546
+AG +G G+ G PGPPG S+ E G ++ + PA P P
Sbjct: 166 EAGAEGPAGEAGPPGPPGPDGKPGAAGSDGEAGAPGTKTTNAPGEPGPAGPPGP 219
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 33.1 bits (72), Expect = 0.43
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGENEL 570
GL+GE G+ G PG PG E E+G P + + D +P GEN L
Sbjct: 877 GLEGECGEDGFPGSPGQPGYPGQQGREGEKG-YPGIPGENGLPGLRGQDGQPGLKGENGL 935
Query: 571 E 573
+
Sbjct: 936 D 936
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 352 PGGPDFISCKID---AGLKGEKGDRGHPGPPG 438
PG P + D G KG +GDRG PG PG
Sbjct: 72 PGAPGMFGAEGDFGDMGSKGARGDRGLPGSPG 103
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 388 AGLKGEKGDRGHPGPPG 438
+G+KGEKG G PGPPG
Sbjct: 223 SGVKGEKGLPGPPGPPG 239
Score = 29.9 bits (64), Expect = 4.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
+PG P + GL+G+ G+ G+PG PG
Sbjct: 1084 LPGAPGVPGVEGVPGLEGDCGEDGYPGAPG 1113
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 388 AGLKGEKGDRGHPGPPGI 441
AG+KGEKG G GPPG+
Sbjct: 263 AGVKGEKGRDGPVGPPGM 280
Score = 29.5 bits (63), Expect = 5.3
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGE 561
GL+GE GD G PG G C + + + G +P +D +P ++GE
Sbjct: 704 GLRGEHGDNGLPGLEGECGEEGSRGLDGVPGYPGEH-GTDGLPGLPGADGQPGFVGE 759
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 33.1 bits (72), Expect = 0.43
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGENEL 570
GL+GE G+ G PG PG E E+G P + + D +P GEN L
Sbjct: 1134 GLEGECGEDGFPGSPGQPGYPGQQGREGEKG-YPGIPGENGLPGLRGQDGQPGLKGENGL 1192
Query: 571 E 573
+
Sbjct: 1193 D 1193
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 352 PGGPDFISCKID---AGLKGEKGDRGHPGPPG 438
PG P + D G KG +GDRG PG PG
Sbjct: 72 PGAPGMFGAEGDFGDMGSKGARGDRGLPGSPG 103
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 388 AGLKGEKGDRGHPGPPG 438
+G+KGEKG G PGPPG
Sbjct: 223 SGVKGEKGLPGPPGPPG 239
Score = 29.9 bits (64), Expect = 4.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
+PG P + GL+G+ G+ G+PG PG
Sbjct: 1341 LPGAPGVPGVEGVPGLEGDCGEDGYPGAPG 1370
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 388 AGLKGEKGDRGHPGPPGI 441
AG+KGEKG G GPPG+
Sbjct: 263 AGVKGEKGRDGPVGPPGM 280
Score = 29.5 bits (63), Expect = 5.3
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGE 561
GL+GE GD G PG G C + + + G +P +D +P ++GE
Sbjct: 961 GLRGEHGDNGLPGLEGECGEEGSRGLDGVPGYPGEH-GTDGLPGLPGADGQPGFVGE 1016
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 33.1 bits (72), Expect = 0.43
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGENEL 570
GL+GE G+ G PG PG E E+G P + + D +P GEN L
Sbjct: 1133 GLEGECGEDGFPGSPGQPGYPGQQGREGEKG-YPGIPGENGLPGLRGQDGQPGLKGENGL 1191
Query: 571 E 573
+
Sbjct: 1192 D 1192
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 352 PGGPDFISCKID---AGLKGEKGDRGHPGPPG 438
PG P + D G KG +GDRG PG PG
Sbjct: 72 PGAPGMFGAEGDFGDMGSKGARGDRGLPGSPG 103
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 388 AGLKGEKGDRGHPGPPG 438
+G+KGEKG G PGPPG
Sbjct: 223 SGVKGEKGLPGPPGPPG 239
Score = 29.9 bits (64), Expect = 4.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
+PG P + GL+G+ G+ G+PG PG
Sbjct: 1340 LPGAPGVPGVEGVPGLEGDCGEDGYPGAPG 1369
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 388 AGLKGEKGDRGHPGPPGI 441
AG+KGEKG G GPPG+
Sbjct: 263 AGVKGEKGRDGPVGPPGM 280
Score = 29.5 bits (63), Expect = 5.3
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGE 561
GL+GE GD G PG G C + + + G +P +D +P ++GE
Sbjct: 960 GLRGEHGDNGLPGLEGECGEEGSRGLDGVPGYPGEH-GTDGLPGLPGADGQPGFVGE 1015
>Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical
protein C39E9.9 protein.
Length = 276
Score = 31.9 bits (69), Expect = 0.98
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 388 AGLKGEKGDRGHPGPPG 438
AGL GE+GD G PGP G
Sbjct: 237 AGLDGERGDEGEPGPEG 253
Score = 29.5 bits (63), Expect = 5.3
Identities = 19/63 (30%), Positives = 24/63 (38%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVP 528
+PG P GL G+ G+ G PGP G + ERGD P +P
Sbjct: 200 MPGAPGAPGVAGAEGLPGKDGEPGIPGPEGEEGPPGAAGLDGERGDE-GEPGPEGPPGIP 258
Query: 529 ASD 537
D
Sbjct: 259 GPD 261
Score = 28.7 bits (61), Expect(2) = 0.47
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGI 441
G GE G++G PGPPG+
Sbjct: 139 GPDGEPGEQGPPGPPGV 155
Score = 23.0 bits (47), Expect(2) = 0.47
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +1
Query: 418 GHPGPPGICECKPTD-NSENERGD 486
GH GPPG+ E +P D + E G+
Sbjct: 161 GHDGPPGV-EGEPGDAGDQGEDGE 183
>Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical
protein M199.5 protein.
Length = 660
Score = 32.7 bits (71), Expect = 0.56
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +1
Query: 379 KIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 507
K D G KGEKG G PG G K D + +GD + +K
Sbjct: 162 KGDKGEKGEKGSNGSPGSKGDKGEKGADGNPGPKGDKGADGAK 204
Score = 31.9 bits (69), Expect = 0.98
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSA--SRPSKTTCSNVPASDPKPQWMGEN 564
G KG+KGD+G GP G T S+ ++G+ +P + D +P G++
Sbjct: 499 GSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGDKGEKGQDGQPGQKGQD 558
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +1
Query: 355 GGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 507
G P K D G KG+KG G G G K + E+G + S SK
Sbjct: 130 GAPGAKGSKGDDGKKGDKGSSGEKGEKGSPGQKGDKGEKGEKGSNGSPGSK 180
Score = 30.7 bits (66), Expect = 2.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 507
G KG+KG++G GP G T ++ ++GD + +K
Sbjct: 295 GQKGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGADGAK 333
Score = 30.7 bits (66), Expect = 2.3
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASR 498
PG K D G G+KGD+G G G K D ++GD +
Sbjct: 522 PGSKGDKGEKGDIGQPGQKGDKGEKGQDGQPGQKGQDGQPGQKGDKGDK 570
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 507
G GEKG G G PG K D + ++G S + K
Sbjct: 118 GPPGEKGKDGDKGAPGAKGSKGDDGKKGDKGSSGEKGEK 156
Score = 29.9 bits (64), Expect = 4.0
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1
Query: 355 GGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 507
G P K + GL G KGD+G G PG K ++ +G + SK
Sbjct: 388 GTPGAKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSK 438
Score = 29.9 bits (64), Expect = 4.0
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = +1
Query: 355 GGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPAS 534
G P K + GL G KGD+G G PG K ++ +G + SK +
Sbjct: 451 GTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLD 510
Query: 535 DPK 543
PK
Sbjct: 511 GPK 513
Score = 29.5 bits (63), Expect = 5.3
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGE 561
G KG+KG++G G PG K D ++ G S+ K + +D P G+
Sbjct: 178 GSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGS-DGAKGADGNPGSKGD 233
Score = 29.5 bits (63), Expect = 5.3
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1
Query: 355 GGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 507
G P K + GL G KGD+G G PG K ++ +G + SK
Sbjct: 292 GTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGADGAKGADGTPGSK 342
Score = 29.1 bits (62), Expect = 6.9
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 507
G KGEKGD G PG G K D ++G K
Sbjct: 594 GDKGEKGDIGQPGQKGDKGDKGQDGQPGQKGQDGQPGQK 632
Score = 28.7 bits (61), Expect = 9.2
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +1
Query: 379 KIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSN 522
K D G GEKG++G PG G K S G + K N
Sbjct: 144 KGDKGSSGEKGEKGSPGQKGDKGEKGEKGSNGSPGSKGDKGEKGADGN 191
Score = 28.7 bits (61), Expect = 9.2
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 507
G KGEKGD G PG G K D ++G K
Sbjct: 526 GDKGEKGDIGQPGQKGDKGEKGQDGQPGQKGQDGQPGQK 564
>U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protein
175 protein.
Length = 287
Score = 32.7 bits (71), Expect = 0.56
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
IPGG K AG +G +GD G PGPPG
Sbjct: 138 IPGG----CIKCPAGPRGPRGDAGPPGPPG 163
>U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protein
75 protein.
Length = 285
Score = 32.3 bits (70), Expect = 0.75
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
PG P I G +G GDRG PGPPG
Sbjct: 225 PGSPGSIGAM---GYEGAYGDRGEPGPPG 250
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 32.3 bits (70), Expect = 0.75
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 507
+PG P GL G+ G G PGPPG + +E E G SK
Sbjct: 484 LPGPPGEKGDLGPPGLPGQPGSLGLPGPPGPMGLRGPHGTEGETGKQGPEGSK 536
Score = 29.9 bits (64), Expect = 4.0
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 400 GEKGDRGHPGPPGICECKPTDNSENERGDSASRPS-KTTCSNVPASDPKP 546
G KG+ G PG GI + E+GD+A + S+ AS P P
Sbjct: 213 GPKGETGSPGRDGIPGARGPPGERGEKGDTAFLSTYPRVASSSTASSPGP 262
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGI 441
G GE+GDRG GPPG+
Sbjct: 446 GHSGERGDRGDIGPPGL 462
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 32.3 bits (70), Expect = 0.75
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +1
Query: 352 PGGPDFISCKIDAG---LKGEKGDRGHPGPPGIC-ECKPTDNSENERGDSASRPSKTTCS 519
PG + + DAG L G +G +G PG PG C C+ + +E A P +
Sbjct: 238 PGVRGAVGARGDAGNPGLPGPQGPKGEPGNPGTCHHCQNRAPAPSEAPGKAPPPPQDYTR 297
Query: 520 NVPASDP 540
P S P
Sbjct: 298 PAPESYP 304
>U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform a protein.
Length = 335
Score = 31.5 bits (68), Expect = 1.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDN 465
G +G G +G PG PG+C C+ D+
Sbjct: 270 GPEGPMGGQGPPGEPGVCVCQNVDS 294
>U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform b protein.
Length = 372
Score = 31.5 bits (68), Expect = 1.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDN 465
G +G G +G PG PG+C C+ D+
Sbjct: 307 GPEGPMGGQGPPGEPGVCVCQNVDS 331
>U40937-1|AAA81693.1| 396|Caenorhabditis elegans Collagen protein
164 protein.
Length = 396
Score = 31.5 bits (68), Expect = 1.3
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = +1
Query: 361 PDFISCKID----AGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVP 528
P+ KID AG KGE G G PG G D ++ +AS+ + C+ P
Sbjct: 93 PEASPVKIDDSCPAGPKGESGSAGEPGTDGTDGTPGKDGADGSNEQTASQ-AGDLCTACP 151
Query: 529 ASDP 540
A P
Sbjct: 152 AGPP 155
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 352 PGGPDFIS-CKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERG 483
P GP ++ K G +GEKGD+G PG G D E + G
Sbjct: 151 PAGPPGVAGYKGKRGPRGEKGDKGAPGNAGRDGAPGDDGPEGDHG 195
>L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein.
Length = 356
Score = 31.5 bits (68), Expect = 1.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDN 465
G +G G +G PG PG+C C+ D+
Sbjct: 291 GPEGPMGGQGPPGEPGVCVCQNVDS 315
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 31.5 bits (68), Expect = 1.3
Identities = 24/65 (36%), Positives = 27/65 (41%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPA 531
PG P F G G GD G PG PG +P +N +G S SRP PA
Sbjct: 208 PGAPSFGGGVGAPGAPGPAGDAGSPGQPG-APGQPGRPGKNAQGGS-SRPGPPG----PA 261
Query: 532 SDPKP 546
P P
Sbjct: 262 GPPGP 266
>AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen protein
49 protein.
Length = 283
Score = 31.5 bits (68), Expect = 1.3
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +1
Query: 388 AGLKGEKGDRGHPGPPGICECKPTDNSENERGDSA--SRPSKTTCSNVPASDPKP 546
AG GEKG G+PG PG D GD P+ C PA P P
Sbjct: 97 AGPPGEKGSLGNPGQPG---PDGVDGDNGVDGDVVIHDMPNPKECIKCPAGPPGP 148
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 31.1 bits (67), Expect = 1.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGI 441
GL G +GD+G PGPPG+
Sbjct: 740 GLHGSRGDQGLPGPPGM 756
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 397 KGEKGDRGHPGPPG 438
KGEKG+RG PG PG
Sbjct: 860 KGEKGERGAPGAPG 873
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 31.1 bits (67), Expect = 1.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGI 441
GL G +GD+G PGPPG+
Sbjct: 343 GLHGSRGDQGLPGPPGM 359
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 397 KGEKGDRGHPGPPG 438
KGEKG+RG PG PG
Sbjct: 463 KGEKGERGAPGAPG 476
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 31.1 bits (67), Expect = 1.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGI 441
GL G +GD+G PGPPG+
Sbjct: 703 GLHGSRGDQGLPGPPGM 719
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 397 KGEKGDRGHPGPPG 438
KGEKG+RG PG PG
Sbjct: 823 KGEKGERGAPGAPG 836
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 31.1 bits (67), Expect = 1.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGI 441
GL G +GD+G PGPPG+
Sbjct: 215 GLHGSRGDQGLPGPPGM 231
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 397 KGEKGDRGHPGPPG 438
KGEKG+RG PG PG
Sbjct: 335 KGEKGERGAPGAPG 348
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 31.1 bits (67), Expect = 1.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGI 441
GL G +GD+G PGPPG+
Sbjct: 740 GLHGSRGDQGLPGPPGM 756
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 397 KGEKGDRGHPGPPG 438
KGEKG+RG PG PG
Sbjct: 860 KGEKGERGAPGAPG 873
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 31.1 bits (67), Expect = 1.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGI 441
GL G +GD+G PGPPG+
Sbjct: 343 GLHGSRGDQGLPGPPGM 359
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 397 KGEKGDRGHPGPPG 438
KGEKG+RG PG PG
Sbjct: 463 KGEKGERGAPGAPG 476
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 31.1 bits (67), Expect = 1.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGI 441
GL G +GD+G PGPPG+
Sbjct: 703 GLHGSRGDQGLPGPPGM 719
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 397 KGEKGDRGHPGPPG 438
KGEKG+RG PG PG
Sbjct: 823 KGEKGERGAPGAPG 836
>U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 2 protein.
Length = 380
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/53 (26%), Positives = 20/53 (37%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQ 549
G G G++G G PG C C+ T+ N+ P +PQ
Sbjct: 286 GPNGPTGEQGPSGTPGTCVCQDTEVVMNDEKGRVPAPRDNVAPGATGGSYEPQ 338
>L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein.
Length = 360
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/53 (26%), Positives = 20/53 (37%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQ 549
G G G++G G PG C C+ T+ N+ P +PQ
Sbjct: 286 GPNGPTGEQGPSGTPGTCVCQDTEVVMNDEKGRVPAPRDNVAPGATGGSYEPQ 338
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 31.1 bits (67), Expect = 1.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGI 441
GL G +GD+G PGPPG+
Sbjct: 215 GLHGSRGDQGLPGPPGM 231
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 397 KGEKGDRGHPGPPG 438
KGEKG+RG PG PG
Sbjct: 335 KGEKGERGAPGAPG 348
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 31.1 bits (67), Expect = 1.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGI 441
GL G +GD+G PGPPG+
Sbjct: 343 GLHGSRGDQGLPGPPGM 359
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 397 KGEKGDRGHPGPPG 438
KGEKG+RG PG PG
Sbjct: 463 KGEKGERGAPGAPG 476
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 31.1 bits (67), Expect = 1.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGI 441
GL G +GD+G PGPPG+
Sbjct: 682 GLHGSRGDQGLPGPPGM 698
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 397 KGEKGDRGHPGPPG 438
KGEKG+RG PG PG
Sbjct: 802 KGEKGERGAPGAPG 815
>Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical
protein E03G2.4 protein.
Length = 333
Score = 30.3 bits (65), Expect = 3.0
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 349 IPGGPDFISCKID-AGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNV 525
+PGG I+ AGL+G G G PG PG+ + KP ++ R S P +
Sbjct: 241 LPGGKGIPGKLIEVAGLEGPPGQSGLPGMPGL-QGKPGNDGYPGRDGS---PGDQGDDGI 296
Query: 526 PASDPKPQWMG 558
P KP G
Sbjct: 297 PGGPGKPGQKG 307
>Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical
protein F59F3.2 protein.
Length = 430
Score = 30.3 bits (65), Expect = 3.0
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPP-GICECKPTDNS 468
GL+G G RG PG G C+C P + S
Sbjct: 272 GLRGVPGRRGSPGKDGGYCQCPPREGS 298
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 30.3 bits (65), Expect = 3.0
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +1
Query: 385 DAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 546
DAG G+ G G PGPPG + E+G + P K + P P P
Sbjct: 178 DAGTSGQDGVPGLPGPPGPSGPQGAPGVPGEKGPT-GEPGK-VINGAPPGPPGP 229
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 29.9 bits (64), Expect = 4.0
Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +1
Query: 385 DAGL-KGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQ 549
DAG + GD G P PP K G TT N + DPKP+
Sbjct: 52 DAGNPNSQAGDSGKPNPPAGDPTKLKPGGGGPAGKPGPNAGDTTKPNSQSGDPKPR 107
>Z69662-1|CAA93499.1| 359|Caenorhabditis elegans Hypothetical
protein F56D5.1 protein.
Length = 359
Score = 29.9 bits (64), Expect = 4.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 385 DAGLKGEKGDRGHPGPPG 438
+AG KG+ G GHPG PG
Sbjct: 159 NAGRKGKSGKSGHPGQPG 176
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 29.9 bits (64), Expect = 4.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 385 DAGLKGEKGDRGHPGPPGICECKPTDNSE 471
D GL G+ G G+PG PG+ K + E
Sbjct: 103 DRGLDGQPGGAGNPGQPGVAGPKSHEQQE 131
>M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein.
Length = 282
Score = 29.9 bits (64), Expect = 4.0
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPT--DNSENERGDSASRPSKTTCSNVPASDPKP 546
G G GD+G GPPG PT E+GD A RP C P +P
Sbjct: 153 GPAGPAGDQGRHGPPG-----PTGGQGGPGEQGD-AGRPGAAGCPGPPGPRGEP 200
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.5 bits (63), Expect = 5.3
Identities = 22/65 (33%), Positives = 24/65 (36%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPA 531
PG P AG G G G PG P I E T + E GDS P P
Sbjct: 182 PGSPGPRGPPGPAGEAGAPGPAGEPGTPAISE-PLTPGAPGEPGDSGP-PGPPGPPGAPG 239
Query: 532 SDPKP 546
+D P
Sbjct: 240 NDGPP 244
>Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical
protein F22D6.10 protein.
Length = 302
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +1
Query: 385 DAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 507
+ G K RG PGPPG TD + G + PS+
Sbjct: 87 NCGAKASNCPRGPPGPPGEPGENGTDGQAGQDGQDGNTPSE 127
>Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical
protein K07C5.3 protein.
Length = 493
Score = 29.5 bits (63), Expect = 5.3
Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 4/104 (3%)
Frame = +1
Query: 403 EKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGE----NEL 570
EK + P P K + E+GD + PS+ + +P E N
Sbjct: 107 EKRSKDGPAEPKKTPAKKKTEEKEEKGDVEATPSRKRKNEETLKSKRPTEFNEESDFNSF 166
Query: 571 ESFKIECDEAENMTCIAHETFSQKSILVKKNFTMQKQSFWWSTF 702
F C + ++ + ++ S+L KKNF W TF
Sbjct: 167 YKFVKVCSVLKEISVKSEKSAVITSLLQKKNF--DGDLMLWLTF 208
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.5 bits (63), Expect = 5.3
Identities = 22/65 (33%), Positives = 24/65 (36%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPA 531
PG P AG G G G PG P I E T + E GDS P P
Sbjct: 177 PGSPGPRGPPGPAGEAGAPGPAGEPGTPAISE-PLTPGAPGEPGDSGP-PGPPGPPGAPG 234
Query: 532 SDPKP 546
+D P
Sbjct: 235 NDGPP 239
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.5 bits (63), Expect = 5.3
Identities = 22/65 (33%), Positives = 24/65 (36%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPA 531
PG P AG G G G PG P I E T + E GDS P P
Sbjct: 177 PGSPGPRGPPGPAGEAGAPGPAGEPGTPAISE-PLTPGAPGEPGDSGP-PGPPGPPGAPG 234
Query: 532 SDPKP 546
+D P
Sbjct: 235 NDGPP 239
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 29.5 bits (63), Expect = 5.3
Identities = 19/65 (29%), Positives = 23/65 (35%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPA 531
PG P F S G G KG RG PG PG + + + P + P
Sbjct: 157 PGQPGFGSGFGAPGPAGPKGQRGAPGHPGQAGAPGQPGVDAQSQSTPGAPGQAGPQGPPG 216
Query: 532 SDPKP 546
S P
Sbjct: 217 SSGAP 221
Score = 28.7 bits (61), Expect = 9.2
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 352 PGGPDFISC---KIDAGLKGEKGDRGHPGPPG 438
PGGP F K +G G+ G G+PG PG
Sbjct: 224 PGGPGFPGAPGSKGPSGAPGQPGANGNPGAPG 255
>AF039720-3|AAB96697.1| 281|Caenorhabditis elegans Collagen protein
54 protein.
Length = 281
Score = 29.5 bits (63), Expect = 5.3
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 GEKGDRGHPGPPGICECKPTDNSENERGDS-ASRPSKTTCSNVPASDPKPQ 549
GE G G PG PG + G S K C PA +P PQ
Sbjct: 90 GEAGPPGAPGTPGADGEAGNPGKDGAAGSSLVFEDEKLPCIKCPAGEPGPQ 140
>Z81567-3|CAB04587.1| 301|Caenorhabditis elegans Hypothetical
protein K08C9.4 protein.
Length = 301
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 349 IPGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
I G P + DAG G+ G+ G PGP G
Sbjct: 168 IDGAPGEAGPQGDAGAAGQDGEAGAPGPAG 197
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 29.1 bits (62), Expect = 6.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 385 DAGLKGEKGDRGHPGPPG 438
DAG G+ G GHPG PG
Sbjct: 174 DAGAPGQAGAPGHPGAPG 191
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 29.1 bits (62), Expect = 6.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 385 DAGLKGEKGDRGHPGPPG 438
DAG G+ G GHPG PG
Sbjct: 174 DAGAPGQAGAPGHPGAPG 191
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 29.1 bits (62), Expect = 6.9
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = +1
Query: 355 GGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPAS 534
G P + + + G +G GD G PGP G P +N R + P +T P
Sbjct: 232 GPPGPMGARGEPGHRGLPGDNGMPGPMG----PPGYRGDNGRRGAPGLPGRTGRHGKPGG 287
Query: 535 D 537
D
Sbjct: 288 D 288
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 29.1 bits (62), Expect = 6.9
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 546
GL G++GD+G G PG + +G + + P K P + P
Sbjct: 160 GLPGDQGDKGEAGQPGQPGSDAAPGEQGPKGPNGA-PGKPGAPGAPGDEGLP 210
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 29.1 bits (62), Expect = 6.9
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 546
GL G++GD+G G PG + +G + + P K P + P
Sbjct: 160 GLPGDQGDKGEAGQPGQPGSDAAPGEQGPKGPNGA-PGKPGAPGAPGDEGLP 210
>AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen protein
104 protein.
Length = 281
Score = 29.1 bits (62), Expect = 6.9
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTT 513
PG P GL+G G GHPG PG + E GD S T
Sbjct: 150 PGAPGDKGNDGAPGLRGPDGHPGHPGNPGYGGEPGAPGNNGEPGDKGRDGSHGT 203
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 29.1 bits (62), Expect = 6.9
Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = +1
Query: 352 PGGPDFISCKIDAG-LKGEKGDRGHPGP---PGICECKPTDNSENERGDSASRPSKTT 513
P GP K AG KG GD+G+PGP PG D S E+G P T
Sbjct: 266 PPGPPGPRGKDGAGGEKGAPGDQGNPGPYGKPGQPGAPGPDGSAGEKGGCDHCPPPRT 323
>Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical
protein F57B7.3 protein.
Length = 295
Score = 28.7 bits (61), Expect = 9.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
PG P + DAG G+ G +G G PG
Sbjct: 167 PGAPGVAGPQGDAGTPGQPGQQGQDGRPG 195
>Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.2 protein.
Length = 297
Score = 28.7 bits (61), Expect = 9.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 352 PGGPDFISCKIDAGLKGEKGDRGHPGPPG 438
PG P + G KGE+G G PGP G
Sbjct: 225 PGQPGKQGSAGNPGRKGERGQDGQPGPGG 253
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 28.7 bits (61), Expect = 9.2
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +1
Query: 391 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 546
G G KG G PG PG+ N N + ++ ++ C P + P P
Sbjct: 93 GPTGPKGPDGGPGQPGLIGLNGR-NGRNGKYVASEAHNEPACQKCPVAPPGP 143
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 28.7 bits (61), Expect = 9.2
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +1
Query: 457 TDNSENERGDSASRPSKTTCSNVPASDPKPQWMGE--NELESFKIE---CDEAENMTCIA 621
T+ +N + + +TT P +D QW + EL KIE CD A C+
Sbjct: 159 TNRMQNVQKHPETSLRRTT--RTPVADQIHQWKTQLSGELTKSKIEQKTCDAALYQVCLK 216
Query: 622 HETFSQKSILVKKN 663
H + SQ + +KN
Sbjct: 217 HVSCSQLWSMFRKN 230
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,003,219
Number of Sequences: 27780
Number of extensions: 475651
Number of successful extensions: 3762
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3317
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3505977888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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