Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_C17
(1363 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 47 5e-06
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 46 9e-06
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 41 3e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 40 0.001
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.010
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.013
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 32 0.21
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 30 0.85
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 2.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.6
SPMIT.07 |atp6||F0-ATPase subunit 6|Schizosaccharomyces pombe|ch... 27 6.0
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 7.9
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 7.9
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 47.2 bits (107), Expect = 5e-06
Identities = 30/79 (37%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = -2
Query: 1002 NPPPPXPXXRVXGPXXGPXXPXXFFPGXSPXXXGGXPXXPPXG--GXXPPPPPPXXPGPX 829
+PPPP P V P P P +P G P PP G G PPPPPP P P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIP----VPPPAPIMGGPPPPPPPPGVAGAGPPPPPP--PPPA 784
Query: 828 VXGXGXXXXXPKPN-PPXP 775
V G P P P P
Sbjct: 785 VSAGGSRYYAPAPQAEPEP 803
Score = 37.5 bits (83), Expect = 0.004
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Frame = -1
Query: 1342 RGXPPXXPXXAPPXGXXGXFXPPPPX---GGXPPPXXXXPPPGXXXXPPPPP 1196
+ PP P P PPP GG PPP PPPG PPPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP---PPPGVAGAGPPPP 778
Score = 32.7 bits (71), Expect = 0.12
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = -1
Query: 1276 PPPXGGXPPPXXXXPPPGXXXXPPPPPXG-XXXXXXPXXXPGXXPGGPPXGXXP 1118
PPP PPP P P P PPP P PG GPP P
Sbjct: 732 PPP----PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 31.9 bits (69), Expect = 0.21
Identities = 21/75 (28%), Positives = 22/75 (29%)
Frame = -1
Query: 1210 PPPPPXGXXXXXXPXXXPGXXPGGPPXGXXPGGTPXXXXXXPXGXSPPPXXXGPXFFXXX 1031
PPPPP P P P PP G P G PPP P
Sbjct: 732 PPPPPPAVIV---PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Query: 1030 XPGGXAPXXKPPPXP 986
AP + P P
Sbjct: 789 GSRYYAPAPQAEPEP 803
Score = 31.1 bits (67), Expect = 0.37
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 1280 PPPPXGGXPPPXXGXXPPGGXXXXPPPP 1197
PP P G PPP PPG PPPP
Sbjct: 753 PPAPIMGGPPPP--PPPPGVAGAGPPPP 778
Score = 30.3 bits (65), Expect = 0.64
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = -3
Query: 1256 PPPXXGXXPPGGXXXXPPPPXGXXXXXXPXXPPXXGXXGAPXGGXPGGXPPGXFXXPXRG 1077
PPP P P PP P PP G GA P PP R
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGA-GPPPPPPPPPAVSAGGSRY 792
Query: 1076 FPPPP 1062
+ P P
Sbjct: 793 YAPAP 797
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -1
Query: 1333 PPXXPXXAPPXGXXGXFXPPPPXGGXPPPXXXXPPP 1226
P P AP G PPP G PP PPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 46.4 bits (105), Expect = 9e-06
Identities = 44/174 (25%), Positives = 44/174 (25%), Gaps = 2/174 (1%)
Frame = -1
Query: 1279 PPPPX--GGXPPPXXXXPPPGXXXXPPPPPXGXXXXXXPXXXPGXXPGGPPXGXXPGGTP 1106
PPPP PP PPPPP P G PP P P
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP---PRSAP 370
Query: 1105 XXXXXXPXGXSPPPXXXGPXFFXXXXPGGXAPXXKPPPXPPXFXGXRPLXGPXXPXXFFP 926
G PPP P P P PP R P P
Sbjct: 371 ST------GRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLP 424
Query: 925 RGFPPXXXGXPXXPPXXGXXTPXPPPXXPGXXGPWAGEXXXXPKTQPPXPXXXP 764
PP P PP P PP P P A PP P P
Sbjct: 425 PSAPPSL--PPSAPPSLPMGAPAAPPLPPS--APIAPPLPAGMPAAPPLPPAAP 474
Score = 45.2 bits (102), Expect = 2e-05
Identities = 44/169 (26%), Positives = 44/169 (26%), Gaps = 1/169 (0%)
Frame = -1
Query: 1321 PXXAPPXGXXGXFXPPPPXG-GXPPPXXXXPPPGXXXXPPPPPXGXXXXXXPXXXPGXXP 1145
P PP P PP G PPP P PPP P P P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPA-IP 396
Query: 1144 GGPPXGXXPGGTPXXXXXXPXGXSPPPXXXGPXFFXXXXPGGXAPXXKPPPXPPXFXGXR 965
G P G P P P P AP PP PP
Sbjct: 397 GRSAPALPPLGNASRTSTPPV---PTPPSLPP----------SAPPSLPPSAPPSLPMGA 443
Query: 964 PLXGPXXPXXFFPRGFPPXXXGXPXXPPXXGXXTPXPPPXXPGXXGPWA 818
P P P PP G P PP PP P P A
Sbjct: 444 PAAPPLPPSAPIA---PPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVA 489
Score = 39.1 bits (87), Expect = 0.001
Identities = 47/192 (24%), Positives = 48/192 (25%), Gaps = 6/192 (3%)
Frame = -1
Query: 1333 PPXXPXXAPPXGXXGXFXPPPPXGGXPPPXXXXPPPGXXXXPPPPPXGXXXXXXPXXXPG 1154
PP P PP P PP P PP PP P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPN----SPPRPIAPVSMNPAINSTS 288
Query: 1153 XXPGGPPXGXXPGGTPXXXXXXPXGXSPPPXXXGPXFFXXXXPGGXAPXXKPPPXPP--X 980
P PP P PPP G PPP PP
Sbjct: 289 KPPLPPPSSRVSAAALAANKKRP--PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSN 346
Query: 979 FXGXRPL--XGPXXPXXFFPRGFPPXXXGXPXXPPXXGXXT-PXPPPXXPGXXGPWAGEX 809
G PL G P PR P P P PPP PG P
Sbjct: 347 AAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPL 406
Query: 808 XXXPKTQ-PPXP 776
+T PP P
Sbjct: 407 GNASRTSTPPVP 418
Score = 39.1 bits (87), Expect = 0.001
Identities = 44/184 (23%), Positives = 45/184 (24%), Gaps = 2/184 (1%)
Frame = -2
Query: 1320 PXXPPPRXXXGXXXXXXXXXXXXXPXXXXPPRGXXXXPPP-PPXGKXXPXSPXXXXXXXX 1144
P PP R G P PPR P PP G+ P P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 1143 GGPPGGXXRGXPPXXXXXPPXGXPPPPXXGXPXFXXGXXRGGXPXXXNPPPPXPXXRVXG 964
G P PP P P G PP P P
Sbjct: 373 GRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPL------GNASRTSTPPVPTP------ 420
Query: 963 PXXGPXXPXXFFPGXSPXXXGGXPXXPPXGGXXPPPPPPXXPGPXVXGXGXXXXXPKPNP 784
P P P P P G P PP P PP P P P P
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Query: 783 -PXP 775
P P
Sbjct: 481 APAP 484
Score = 35.9 bits (79), Expect = 0.013
Identities = 42/167 (25%), Positives = 44/167 (26%), Gaps = 16/167 (9%)
Frame = -2
Query: 1233 PPRGXXXXPPPPPXGKXXPXS--PXXXXXXXXGGPPGGXXRGXPPXXXXXPPXGXPPPPX 1060
P G PP P P S P PP PPPP
Sbjct: 259 PSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPS 318
Query: 1059 X---GXPXFXXGXXRGGXPXXXNPPPPXPXXRVXG----PXXGPXXPXXFFPGXSPXXXG 901
G P G P PPPP P G P G P P +P
Sbjct: 319 RRNRGKPPIGNGSSNSSLP----PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGR 374
Query: 900 GXPXXPPXGGXXPPP-PPPXXPG------PXVXGXGXXXXXPKPNPP 781
P PP PPP PG P + P P PP
Sbjct: 375 QPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
Score = 32.3 bits (70), Expect = 0.16
Identities = 58/264 (21%), Positives = 61/264 (23%), Gaps = 8/264 (3%)
Frame = -1
Query: 1279 PPPPXGGXPPPXXXXPPPGXXXXPPPPPXGXXXXXXPXXXPGXXPGGPPXGXXPGGTPXX 1100
P PP P P PP PP P P PP P
Sbjct: 231 PIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSP-------PNSPPRPIAPVSMNPA 283
Query: 1099 XXXXPXGXSPPPXXXGPXFFXXXXPGGXAPXXKPPPXPPXFXGXR--PLXGPXXPXXFFP 926
PPP A +PPP PP R P G P
Sbjct: 284 INSTSKPPLPPPSSR------VSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLP 337
Query: 925 RGFPPXXX---GXPXXPPXXGXXTPXPPPXXPGXXGPWAGEXXXXPKTQPPXPXXXPXXL 755
PP G PP P PPP G P P P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNP-PAPPPAIP 396
Query: 754 XRKNXXXXXXXXXPKKXAXXXXXXFFXPXXGFPXXPX--PPHXPQKXLFSPPFXXGXX-P 584
R + P P P PP P +PP
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA 456
Query: 583 PPXXXXPXXXPXXPP*GGTPPPXP 512
PP P PP PPP P
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 27.1 bits (57), Expect = 6.0
Identities = 20/72 (27%), Positives = 20/72 (27%)
Frame = -1
Query: 1333 PPXXPXXAPPXGXXGXFXPPPPXGGXPPPXXXXPPPGXXXXPPPPPXGXXXXXXPXXXPG 1154
PP P APP P P G P PP PP P P P
Sbjct: 420 PPSLPPSAPP-SLPPSAPPSLPMGAPAAPPL---PPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 1153 XXPGGPPXGXXP 1118
P P P
Sbjct: 476 PPPAPAPAPAAP 487
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 41.1 bits (92), Expect = 3e-04
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -1
Query: 1333 PPXXPXXAPPXGXXGXFXPPPPXGGXPPPXXXXPPPGXXXXPPPP 1199
PP P A P PPPP PPP P G PPPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 31.9 bits (69), Expect = 0.21
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = -1
Query: 1339 GXPPXXPXXAPPXGXXGXFXPPPPXGGXPPPXXXXPPPGXXXXPPPPPXGXXXXXXPXXX 1160
G P P PP P PPP PPP PP P G P
Sbjct: 1680 GMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPP---PSAPPMPAGPPSAPPPPLP 1736
Query: 1159 PGXXPGGPPXG 1127
P P G
Sbjct: 1737 ASSAPSVPNPG 1747
Score = 30.3 bits (65), Expect = 0.64
Identities = 17/63 (26%), Positives = 17/63 (26%), Gaps = 1/63 (1%)
Frame = -1
Query: 1291 GXFXPPPPXGGXPP-PXXXXPPPGXXXXPPPPPXGXXXXXXPXXXPGXXPGGPPXGXXPG 1115
G P P P P PP PPPPP P P PP
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPAS 1738
Query: 1114 GTP 1106
P
Sbjct: 1739 SAP 1741
Score = 27.5 bits (58), Expect = 4.5
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -1
Query: 643 PPHXPQKXLFSPPFXXGXXPPPXXXXPXXXPXXPP*GGTPPPXP 512
PP PQ +PP PPP P PP PP P
Sbjct: 1690 PPVRPQSA--APPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.5 bits (88), Expect = 0.001
Identities = 48/192 (25%), Positives = 50/192 (26%), Gaps = 6/192 (3%)
Frame = -1
Query: 1321 PXXAPPXGXXGXFXP--PPPXGGXPPPXXXXPPPGXXXXPPPPPXGXXXXXXPXXXPGXX 1148
P PP P P P G P P PP PP P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVP---PVPA 1116
Query: 1147 PGGPPXGXXPGGTPXXXXXXPXGXSPPPXXXGPXFFXXXXPGGXAPXXKP----PPXPPX 980
P G P P P G +PP P G P KP PP P
Sbjct: 1117 PSGAPPVPKPS-VAAPPVPVPSG-APPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 979 FXGXRPLXGPXXPXXFFPRGFPPXXXGXPXXPPXXGXXTPXPPPXXPGXXGPWAGEXXXX 800
G P+ P PP P P G PP P P AG
Sbjct: 1175 SSGIPPVPKPAAGVP----PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Query: 799 PKTQPPXPXXXP 764
T P P
Sbjct: 1231 VPTAKAPPVPAP 1242
Score = 36.3 bits (80), Expect = 0.010
Identities = 34/128 (26%), Positives = 35/128 (27%)
Frame = -1
Query: 1333 PPXXPXXAPPXGXXGXFXPPPPXGGXPPPXXXXPPPGXXXXPPPPPXGXXXXXXPXXXPG 1154
P P APP PP P PP P P P P P G P
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPP---VPKPSVAAPPVPAPSGAPPVPKPSVAAP 1169
Query: 1153 XXPGGPPXGXXPGGTPXXXXXXPXGXSPPPXXXGPXFFXXXXPGGXAPXXKPPPXPPXFX 974
P P G P P P PPP P P PP P
Sbjct: 1170 PVP-APSSGIPP--VPKPAAGVP--PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSA 1224
Query: 973 GXRPLXGP 950
G P+ P
Sbjct: 1225 GLPPVPVP 1232
Score = 35.5 bits (78), Expect = 0.017
Identities = 39/156 (25%), Positives = 39/156 (25%), Gaps = 12/156 (7%)
Frame = -2
Query: 1206 PPPPXGKXXPXSPXXXXXXXXGGPPGGXXRGXPPXXXXXP---PXGXPPPPXXGXPXFXX 1036
PP P P P P G P P P G PP P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 1035 GXXRGGXPXXXNP-------PPPXPXXRVXGPXXG-PXXPXXFFPGXSPXXXGGXPXXPP 880
G P P PPP V P G P P P G P P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPV 1231
Query: 879 XGGXXPPPPPPXXPGPXVXGXGXXXXXPKPN-PPXP 775
PP P P P V P N P P
Sbjct: 1232 PTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSP 1267
Score = 32.3 bits (70), Expect = 0.16
Identities = 38/159 (23%), Positives = 39/159 (24%), Gaps = 6/159 (3%)
Frame = -2
Query: 1233 PPRGXXXXPPPPPXGKXXPXSPXXXXXXXXGGPPGGXXRGXPPXXXXXPPXGXPPPPXXG 1054
PP PP P P P PP P P G PP P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPA--PSGAPPVPAPS 1089
Query: 1053 XPXFXXGXXRGGXPXXXNPPPPXPXXRVX---GPXXGPXXPXXFFPGXSPXXXGGXPXXP 883
G P PP P P V P P P G P P
Sbjct: 1090 ------GIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Query: 882 PXGGXXPPPPPPXXPGPXVXGXGXXXXXPKPN---PPXP 775
PP P P P P P+ PP P
Sbjct: 1144 KPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 29.9 bits (64), Expect = 0.85
Identities = 42/174 (24%), Positives = 43/174 (24%), Gaps = 2/174 (1%)
Frame = -3
Query: 1277 PPPXGGXPPPXXGXXPPGGXXXXPPPPXGXXXXXXPXXPPXXGXXGAPXGGXPGGXPPGX 1098
P P G P P PP PP P P P G PP
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVP------------APSGAPP-- 1122
Query: 1097 FXXPXRGFPPPPXXGXXXFXXAXXXXXXXXXXXXPXPXPFXGXPAPXXAXXXPXXFSPGX 918
P PP P P P P P P P +P
Sbjct: 1123 VPKPSVAAPPVPVPS------GAPPVPKPSVAAPPVPAPSGAPPVP-----KPSVAAPPV 1171
Query: 917 PPXXXGEXXXPPPXGXXXPXPPP--XXPRXXGSXGXGXXXGPQNPTPXPXXVAG 762
P G P P P PPP P S G P P P AG
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
Score = 27.9 bits (59), Expect = 3.4
Identities = 38/165 (23%), Positives = 40/165 (24%), Gaps = 2/165 (1%)
Frame = -1
Query: 1000 PPPXPPXFXGXRPLXGPXX-PXXFFPRGFPPXXXGXPXXPPXXGXXTPXPPPXXPGXXGP 824
PPP P + P P P G PP PP PP P P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Query: 823 WAGEXXXXPKTQPPXPXXXPXXLXRKNXXXXXXXXXPKKXAXXXXXXFFXPXXGFPXXPX 644
P P P P K P P P
Sbjct: 1123 VPKPSVAAPPV--PVPSGAPPV--PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGI 1178
Query: 643 PPHXPQKXLFSPPFXXGXXPPPXXXXPXXXPXXPP*GGTPP-PXP 512
PP P+ PP PP P PP PP P P
Sbjct: 1179 PP-VPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 36.3 bits (80), Expect = 0.010
Identities = 33/136 (24%), Positives = 33/136 (24%)
Frame = -1
Query: 1333 PPXXPXXAPPXGXXGXFXPPPPXGGXPPPXXXXPPPGXXXXPPPPPXGXXXXXXPXXXPG 1154
PP P P PP PPP PP PP P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP-----SSLPPPAQPA 178
Query: 1153 XXPGGPPXGXXPGGTPXXXXXXPXGXSPPPXXXGPXFFXXXXPGGXAPXXKPPPXPPXFX 974
PP P P PPP P P AP P
Sbjct: 179 APVKSPPSAP---SLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSES 235
Query: 973 GXRPLXGPXXPXXFFP 926
P GP P P
Sbjct: 236 PKFPNRGPSIPSASVP 251
Score = 31.5 bits (68), Expect = 0.28
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = -2
Query: 1014 PXXXNPPPPXPXXRVXGPXXGPXXPXXFFPGXSPXXXGGXPXXPPXGGXXPPPPPPXXPG 835
P + PPP P P P P P P P P PP PP P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Query: 834 P 832
P
Sbjct: 204 P 204
Score = 30.7 bits (66), Expect = 0.49
Identities = 22/76 (28%), Positives = 23/76 (30%), Gaps = 1/76 (1%)
Frame = -2
Query: 999 PPPPXPXXRVXGPXXGPXXPXXFFPGXSPXXXGGXPXXPPXGGXXPPP-PPPXXPGPXVX 823
P PP P + P P P P SP P P P PPP P V
Sbjct: 128 PAPPTPQSELRPPTSAPPRPS--IPPPSP---ASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 822 GXGXXXXXPKPNPPXP 775
P PP P
Sbjct: 183 SPPSAPSLPSAVPPMP 198
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 35.9 bits (79), Expect = 0.013
Identities = 37/107 (34%), Positives = 37/107 (34%)
Frame = +3
Query: 960 RGRXPXKXGGXGGGXXXGAXPPGXXXXKXXGPXXXGGGEXPXGXXKXXXGVPPGXXPXGG 1139
RG GG GGG G PPG G GGE G PG GG
Sbjct: 183 RGHNGGGFGGFGGGS--GGPPPGPGGFGGFGGF---GGEGHHHGGHGGFGGGPGGFE-GG 236
Query: 1140 PPGXXPGXXXGXXXXXXPXGGGGGXXXXPGGGXXXXGGGXPPXGGGG 1280
P G G P G GGG GGG GGG GG G
Sbjct: 237 PGGFGGG----------PGGFGGGLGGF-GGGPGGFGGGPGGHGGPG 272
Score = 33.9 bits (74), Expect = 0.052
Identities = 30/87 (34%), Positives = 30/87 (34%), Gaps = 8/87 (9%)
Frame = +2
Query: 764 RXPXGXGGLGFGXXXXFPXPXTXGPGXXG--GGGGGXXPPXGGXXGXP------PXXXGE 919
R G G GFG P P G G G GG G GG G P P G
Sbjct: 183 RGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG 242
Query: 920 XPGKKXXGXXGPXKGPXTRKXGXGGGG 1000
PG G G GP G GG G
Sbjct: 243 GPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 33.1 bits (72), Expect = 0.091
Identities = 28/86 (32%), Positives = 28/86 (32%), Gaps = 2/86 (2%)
Frame = +3
Query: 777 GXGGWVLGXXXXSPAXGPXXPGXXGG--GXGVXXPXXGGXXGFPXXXGGXPRGKXXXGXX 950
G G G P PG GG G G GG GF GG G G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG- 242
Query: 951 GPXRGRXPXKXGGXGGGXXXGAXPPG 1028
GP G GG GGG PG
Sbjct: 243 GP--GGFGGGLGGFGGGPGGFGGGPG 266
Score = 32.7 bits (71), Expect = 0.12
Identities = 21/56 (37%), Positives = 21/56 (37%)
Frame = +2
Query: 776 GXGGLGFGXXXXFPXPXTXGPGXXGGGGGGXXPPXGGXXGXPPXXXGEXPGKKXXG 943
G GG G G P GPG GGG GG GG G P G G G
Sbjct: 222 GHGGFGGG-----PGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 31.5 bits (68), Expect = 0.28
Identities = 31/94 (32%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +1
Query: 1066 GGGXPRXGXXXXPGGXPPGXPPXGAPXXPXXGGXXGXXXXFXPWGGG-GXXXXPPGGXXP 1242
GGG G GG PPG P G GG +GGG G PGG
Sbjct: 187 GGGF--GGFGGGSGGPPPG--PGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGF-- 240
Query: 1243 XXGGGXPPXGGGGXXPXXXPXGGPXXXXXXGPPG 1344
GGG GGG P G G PG
Sbjct: 241 --GGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 31.1 bits (67), Expect = 0.37
Identities = 29/89 (32%), Positives = 29/89 (32%), Gaps = 3/89 (3%)
Frame = +3
Query: 1065 GGGEXPXGXXKXXXGVPPGXXPXGGPPGXXPGXXXGXXXXXXPXGGGGGXXXXPGG---G 1235
GGG G G PPG GG G G GG GG PGG G
Sbjct: 187 GGGFGGFGGGSG--GPPPGPGGFGGFGGFG-GEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 1236 XXXXGGGXPPXGGGGXKXPXXPXGGAXXG 1322
GGG GGG P G G
Sbjct: 244 PGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 28.7 bits (61), Expect = 2.0
Identities = 27/91 (29%), Positives = 28/91 (30%)
Frame = +2
Query: 839 GXXGGGGGGXXPPXGGXXGXPPXXXGEXPGKKXXGXXGPXKGPXTRKXGXGGGGFXXXGX 1018
G GG GGG P G G G G G GP + G GG G G
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGF 247
Query: 1019 PPRXXPXKKXGXPXXGGGGXPXGGXXXXXGG 1111
G GGG GG GG
Sbjct: 248 --------GGGLGGFGGGPGGFGGGPGGHGG 270
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 31.9 bits (69), Expect = 0.21
Identities = 31/118 (26%), Positives = 31/118 (26%), Gaps = 10/118 (8%)
Frame = -1
Query: 1309 PPXGXXGXFXPPPPXGGXP----PPXXXXPPPGXXXXPPP---PPXGXXXXXXPXXXPGX 1151
P G PPPP P PP PG PPP P PG
Sbjct: 198 PAHHEPGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGE 257
Query: 1150 XPGGPPXGXXPG---GTPXXXXXXPXGXSPPPXXXGPXFFXXXXPGGXAPXXKPPPXP 986
PP PG P PPP P P P PP P
Sbjct: 258 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 29.9 bits (64), Expect = 0.85
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = -1
Query: 1027 PGGXAPXXKPPPXPPXFXGXRPLXGPXXPXXFFPRGFPPXXXGXPXXPPXXGXXTPXPPP 848
PG P P P +P P P P G P G P P G PP
Sbjct: 501 PGVPLPPIPGAPGMPNLNMSQPPMVP--PGMALPPGMPAPFPGYPAVPAMPGIPGATAPP 558
Query: 847 XXPG 836
PG
Sbjct: 559 GAPG 562
Score = 27.9 bits (59), Expect = 3.4
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 4/63 (6%)
Frame = -1
Query: 1291 GXFXPPPPXGGXPPPXXXXPPPGXXXXP----PPPPXGXXXXXXPXXXPGXXPGGPPXGX 1124
G P PP PP P PG P PP P P PG P
Sbjct: 488 GTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPA 547
Query: 1123 XPG 1115
PG
Sbjct: 548 MPG 550
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 903 GGXPXXPPXGGXXPPPPPPXXPGP 832
G P PP G PP PP P P
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 1277 PPPXGGXPPPXXGXXPPGGXXXXPPPPXG 1191
PP PPP G PP PPPP G
Sbjct: 5 PPGNPPPPPPPPGFEPPS--QPPPPPPPG 31
Score = 28.3 bits (60), Expect = 2.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 1276 PPPXGGXPPPXXXXPPPGXXXXPPPP 1199
PP PPP PP PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 1279 PPPPXGGXPPPXXXXPPP 1226
PPPP G PP PPP
Sbjct: 11 PPPPPPGFEPPSQPPPPP 28
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 1279 PPPPXGGXPPPXXXXPPP 1226
PPPP G PP PPP
Sbjct: 12 PPPPPGFEPPSQPPPPPP 29
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -3
Query: 1229 PGGXXXXPPPPXGXXXXXXPXXPPXXG 1149
P G PPPP G P PP G
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 1136 PXGGXPGGXPPGXFXXPXRGFPPPP 1062
P G P PP F P + PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 2.6
Identities = 22/83 (26%), Positives = 24/83 (28%), Gaps = 5/83 (6%)
Frame = -2
Query: 1071 PPPXXGXPXFXXGXXRGGXPXXXNPPPPXP-XXRVXGPXXGPXXPXXFFPGXSPXXXGGX 895
PPP P P NPPPP P V P ++
Sbjct: 167 PPPSFQPPS--AAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIP 224
Query: 894 PXXPPXGG----XXPPPPPPXXP 838
P P PPPPPP P
Sbjct: 225 PTYTPKQADPLPAPPPPPPPTLP 247
>SPMIT.07 |atp6||F0-ATPase subunit 6|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 257
Score = 27.1 bits (57), Expect = 6.0
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
Frame = +1
Query: 226 TLAVRLTANIIAGH-----XXXXXXXXXGTN-ISFYXXXXXXXXXXXXXXXESAVAIIQS 387
+L +RL ANIIAGH G N I+F E +A IQ+
Sbjct: 180 SLGIRLGANIIAGHLTMSILGGLIFTFMGLNLITFIIGFLPITVLVAISLLEFGIAFIQA 239
Query: 388 YVITIL 405
YV IL
Sbjct: 240 YVFAIL 245
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +1
Query: 829 PXXRGXXGGGXGXXXPXGGGXXXSPXXXGGXPGEKXXGXXXAXXGAGNPXXGXG 990
P RG GG G GG GG G G G G G G
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRG 58
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.6 bits (56), Expect = 7.9
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = +3
Query: 1140 PPGXXPGXXXGXXXXXXPXGGGGGXXXXPGGGXXXXGGGXPPXGGGGXKXPXXPXGGAXX 1319
P P G GG GG GG GG GGG + GG+
Sbjct: 119 PKTVGPKKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFG--GGSRG 176
Query: 1320 GXXGG 1334
G GG
Sbjct: 177 GSRGG 181
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,623,522
Number of Sequences: 5004
Number of extensions: 71095
Number of successful extensions: 553
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 751153284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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