Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_C15
(1273 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 512 e-145
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 512 e-145
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 246 e-123
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 306 2e-83
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 255 4e-68
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 255 4e-68
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 225 4e-59
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 6e-33
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 106 3e-23
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 106 3e-23
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 106 3e-23
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 104 1e-22
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 104 1e-22
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 60 4e-09
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 56 5e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 56 5e-08
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 44 2e-05
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 47 3e-05
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 46 8e-05
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 45 1e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 45 1e-04
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 44 3e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 39 0.009
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 39 0.009
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 38 0.020
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.020
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 34 0.19
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 34 0.19
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.33
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.75
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 5.3
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 5.3
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 5.3
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 5.3
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 5.3
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 5.3
AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical ... 29 7.0
AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical ... 29 7.0
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 9.3
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 9.3
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 512 bits (1263), Expect = e-145
Identities = 238/272 (87%), Positives = 252/272 (92%)
Frame = +3
Query: 168 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 347
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 348 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 527
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 528 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 707
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 708 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPXR 887
IGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+I+PP R
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQR 240
Query: 888 PTDKPLRLPLQDVYKIGGIGTVPVGRXETGVL 983
PTD+PLRLPLQDVYKIGGIGTVPVGR ETG++
Sbjct: 241 PTDRPLRLPLQDVYKIGGIGTVPVGRVETGII 272
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 512 bits (1263), Expect = e-145
Identities = 238/272 (87%), Positives = 252/272 (92%)
Frame = +3
Query: 168 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 347
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 348 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 527
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 528 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 707
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 708 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPXR 887
IGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+I+PP R
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQR 240
Query: 888 PTDKPLRLPLQDVYKIGGIGTVPVGRXETGVL 983
PTD+PLRLPLQDVYKIGGIGTVPVGR ETG++
Sbjct: 241 PTDRPLRLPLQDVYKIGGIGTVPVGRVETGII 272
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 246 bits (602), Expect(2) = e-123
Identities = 113/117 (96%), Positives = 116/117 (99%)
Frame = +3
Query: 168 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 347
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 348 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 518
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 214 bits (522), Expect(2) = e-123
Identities = 96/125 (76%), Positives = 108/125 (86%)
Frame = +3
Query: 609 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 788
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 789 MPWFKGWQVERKEGKADGKCLIEALDAILPPXRPTDKPLRLPLQDVYKIGGIGTVPVGRX 968
MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGR
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRV 233
Query: 969 ETGVL 983
ETG++
Sbjct: 234 ETGII 238
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 306 bits (751), Expect = 2e-83
Identities = 148/172 (86%), Positives = 155/172 (90%)
Frame = +3
Query: 168 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 347
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 348 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 527
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 528 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKK 683
GEFEAGISKNGQTREHALLA TLGVKQL V+ T P S R + I++
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169
Score = 61.7 bits (143), Expect = 1e-09
Identities = 40/100 (40%), Positives = 48/100 (48%)
Frame = +1
Query: 673 KSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENAS 852
+S + P +SRR T Q L D TETTC C GSRDG + RK L E S
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERPS 211
Query: 853 LKLSMPSCHLXAPLTSPCVFPCKTYTKSVVLVPCPSAXLK 972
+L PS H A LT VF + T+S L P S L+
Sbjct: 212 SRLLTPSSHHNAQLTDHSVFHSRMCTRSEELEPSQSDVLR 251
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 255 bits (625), Expect = 4e-68
Identities = 127/268 (47%), Positives = 181/268 (67%), Gaps = 1/268 (0%)
Frame = +3
Query: 177 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 356
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 357 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 536
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 537 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIG 713
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 344
Query: 714 YNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPXRPT 893
++ FVP+SG+ G+N+++ ++ W+ DG CL+E +D+ + P P+
Sbjct: 345 FSKP--KFVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPS 389
Query: 894 DKPLRLPLQDVYKIGGIGTVPVGRXETG 977
D PLR+ + DV K+ V G+ E+G
Sbjct: 390 DGPLRIGISDVLKVASNQLVVSGKIESG 417
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 255 bits (625), Expect = 4e-68
Identities = 127/268 (47%), Positives = 181/268 (67%), Gaps = 1/268 (0%)
Frame = +3
Query: 177 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 356
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 357 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 536
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 537 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIG 713
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 362
Query: 714 YNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPXRPT 893
++ FVP+SG+ G+N+++ ++ W+ DG CL+E +D+ + P P+
Sbjct: 363 FSKP--KFVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPS 407
Query: 894 DKPLRLPLQDVYKIGGIGTVPVGRXETG 977
D PLR+ + DV K+ V G+ E+G
Sbjct: 408 DGPLRIGISDVLKVASNQLVVSGKIESG 435
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 225 bits (551), Expect = 4e-59
Identities = 114/271 (42%), Positives = 170/271 (62%), Gaps = 2/271 (0%)
Frame = +3
Query: 171 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 350
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 351 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 530
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 531 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 710
EFE G + GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKL 283
Query: 711 GYNPAA-VAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPP-X 884
G+NP + +VP SG G + + T W G C IE +D +LP
Sbjct: 284 GFNPKTDITYVPCSGLTGAFIKDRPTGSE--GNWY--------SGPCFIEFIDVLLPSYK 333
Query: 885 RPTDKPLRLPLQDVYKIGGIGTVPVGRXETG 977
R + P+R + + Y +GTV +G+ E+G
Sbjct: 334 RDFNGPVRCTVAEKY--SEMGTVIIGKMESG 362
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 6e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +3
Query: 168 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 347
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 348 DKLKAER 368
DKLK +
Sbjct: 61 DKLKVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 106 bits (255), Expect = 3e-23
Identities = 89/274 (32%), Positives = 134/274 (48%), Gaps = 4/274 (1%)
Frame = +3
Query: 174 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 353
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 354 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 533
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 534 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 707
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 199
Query: 708 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD--AILPP 881
GY P P+ G + K P + G+ K L+E LD ++P
Sbjct: 200 FGY-PGDTC--PVI--FGSALCALEGKQP---------EIGEEAVKQLLEVLDNKFVIPE 245
Query: 882 XRPTDKPLRLPLQDVYKIGGIGTVPVGRXETGVL 983
+ ++P+ + VY I G GTV G+ E G+L
Sbjct: 246 RKVNEEPM-FAAEHVYSIVGRGTVITGKLERGIL 278
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 106 bits (255), Expect = 3e-23
Identities = 89/274 (32%), Positives = 134/274 (48%), Gaps = 4/274 (1%)
Frame = +3
Query: 174 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 353
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 354 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 533
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 534 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 707
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 708 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD--AILPP 881
GY P P+ G + K P + G+ K L+E LD ++P
Sbjct: 201 FGY-PGDTC--PVI--FGSALCALEGKQP---------EIGEEAVKQLLEVLDNKFVIPE 246
Query: 882 XRPTDKPLRLPLQDVYKIGGIGTVPVGRXETGVL 983
+ ++P+ + VY I G GTV G+ E G+L
Sbjct: 247 RKVNEEPM-FAAEHVYSIVGRGTVITGKLERGIL 279
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 106 bits (255), Expect = 3e-23
Identities = 89/274 (32%), Positives = 134/274 (48%), Gaps = 4/274 (1%)
Frame = +3
Query: 174 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 353
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 354 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 533
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 534 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 707
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 708 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD--AILPP 881
GY P P+ G + K P + G+ K L+E LD ++P
Sbjct: 201 FGY-PGDTC--PVI--FGSALCALEGKQP---------EIGEEAVKQLLEVLDNKFVIPE 246
Query: 882 XRPTDKPLRLPLQDVYKIGGIGTVPVGRXETGVL 983
+ ++P+ + VY I G GTV G+ E G+L
Sbjct: 247 RKVNEEPM-FAAEHVYSIVGRGTVITGKLERGIL 279
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 104 bits (250), Expect = 1e-22
Identities = 92/273 (33%), Positives = 130/273 (47%), Gaps = 5/273 (1%)
Frame = +3
Query: 180 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 353
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 354 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 533
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 534 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 713
E QT+EH +LA +GVK + + +NK D E E + ++ E + G
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHG 194
Query: 714 YNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKC---LIEALDAILPPX 884
+N GD P +G + EG+ D C LI+ALD++ P
Sbjct: 195 FN-------------GD-------ATPVIRGSALSALEGQ-DISCIERLIDALDSLPEPD 233
Query: 885 RPTDKPLRLPLQDVYKIGGIGTVPVGRXETGVL 983
R +P+ I G GTV VG E GVL
Sbjct: 234 RNEKDTFVMPIASKTAITGRGTVIVGTLERGVL 266
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 104 bits (250), Expect = 1e-22
Identities = 92/273 (33%), Positives = 130/273 (47%), Gaps = 5/273 (1%)
Frame = +3
Query: 180 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 353
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 354 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 533
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 534 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 713
E QT+EH +LA +GVK + + +NK D E E + ++ E + G
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHG 194
Query: 714 YNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKC---LIEALDAILPPX 884
+N GD P +G + EG+ D C LI+ALD++ P
Sbjct: 195 FN-------------GD-------ATPVIRGSALSALEGQ-DISCIERLIDALDSLPEPD 233
Query: 885 RPTDKPLRLPLQDVYKIGGIGTVPVGRXETGVL 983
R +P+ I G GTV VG E GVL
Sbjct: 234 RNEKDTFVMPIASKTAITGRGTVIVGTLERGVL 266
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 59.7 bits (138), Expect = 4e-09
Identities = 47/148 (31%), Positives = 67/148 (45%)
Frame = +3
Query: 192 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 371
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 372 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 551
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 552 KNGQTREHALLAFTLGVKQLIVGVNKMD 635
QT + LAF + Q+I +NK+D
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 56.0 bits (129), Expect = 5e-08
Identities = 47/148 (31%), Positives = 65/148 (43%)
Frame = +3
Query: 192 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 371
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 372 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 551
RGITI A + + IID PGH DF + D AVL++ G G G+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150
Query: 552 KNGQTREHALLAFTLGVKQLIVGVNKMD 635
T L + + I VNKMD
Sbjct: 151 SQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 56.0 bits (129), Expect = 5e-08
Identities = 39/113 (34%), Positives = 53/113 (46%)
Frame = +3
Query: 192 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 371
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 372 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 530
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 44.0 bits (99), Expect(2) = 2e-05
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +3
Query: 315 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 491
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 492 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 635
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
Score = 23.0 bits (47), Expect(2) = 2e-05
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3
Query: 195 IVVIGHVDSGKST 233
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 46.8 bits (106), Expect = 3e-05
Identities = 74/290 (25%), Positives = 117/290 (40%), Gaps = 16/290 (5%)
Frame = +3
Query: 162 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEMGKGSFK 332
P K+ + V+G+VD+GKST G L + G RT K E G+ S
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFESGRTSSV 191
Query: 333 YAWVL------DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS-- 488
+L + + +D + +K VT ID GH ++K I G +
Sbjct: 192 GNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAKL-VTFIDLAGHEKYLKTTIFGMTGH 250
Query: 489 QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRF 668
D +L++ A G G T+EH LA +L V +V V K+D E
Sbjct: 251 MPDYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMCPANILEETM 302
Query: 669 EEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG---WQVERKEGKAD 839
+ I + V S KK+ PI + D+++ + P K +QV EG
Sbjct: 303 KNITRLVRS-AKKL----------PILVRNMDDVVHAAVNFPSKKVCPIFQVSNVEGT-- 349
Query: 840 GKCLIEALDAILPPXRPTDK--PLRLPLQDVYKIGGIGTVPVGRXETGVL 983
L+ I+P R ++ P + D+Y + G+GT+ G +G +
Sbjct: 350 NLPLLRQFLNIVPLRRQLNENDPAHFQIDDIYWVDGVGTIASGTLLSGTI 399
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 45.6 bits (103), Expect = 8e-05
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 3/199 (1%)
Frame = +3
Query: 189 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 368
+N+ ++GHVDSGK+T T + E+G S A
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 369 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 545
R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AG
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 546 ISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY--N 719
I QT EH LLA ++I+ +NK D E + + E K+V +K +G N
Sbjct: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDEN 162
Query: 720 PAAVAFVPISGWHGDNMLE 776
V G+ + ML+
Sbjct: 163 SPIVEMSLADGYFKEEMLQ 181
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 45.2 bits (102), Expect = 1e-04
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +3
Query: 168 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 320
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 321 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 488
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132
Query: 489 QADCAVLIVAAGTG 530
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 44.8 bits (101), Expect = 1e-04
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +3
Query: 168 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 320
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 321 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 488
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132
Query: 489 QADCAVLIVAAGTG 530
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 43.6 bits (98), Expect = 3e-04
Identities = 74/289 (25%), Positives = 116/289 (40%), Gaps = 15/289 (5%)
Frame = +3
Query: 162 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEMGKGSFK 332
P K+ + V+G+VD+GKST G L + G RT K E G+ S
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFESGRTSSV 191
Query: 333 YAWVL------DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 494
+L + + +D + +K VT ID GH ++K I G +
Sbjct: 192 GNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAKL-VTFIDLAGHEIYLKTTIFGMHRP 250
Query: 495 ---DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPR 665
+ +L++ A G G T+EH LA +L V +V V K+D P Y
Sbjct: 251 YARNYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMC-PAYI--- 298
Query: 666 FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKM-PWFKGWQVERKEGKADG 842
EE K ++ ++ P V + N PS K+ P F QV EG
Sbjct: 299 LEETMKNITRLVRSAKKLPILVRNMDDCVHAAVNF--PSKKVCPIF---QVSNVEGT--N 351
Query: 843 KCLIEALDAILPPXRPTDK--PLRLPLQDVYKIGGIGTVPVGRXETGVL 983
L+ ++P R ++ P + D+Y + G+GT+ G +G +
Sbjct: 352 LPLLRQFLNMVPLRRQLNENDPAHFQIDDIYWVDGVGTIASGTLLSGTI 400
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 38.7 bits (86), Expect = 0.009
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +3
Query: 174 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 350
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 351 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 515
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 38.7 bits (86), Expect = 0.009
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +3
Query: 174 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 350
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 351 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 515
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 37.5 bits (83), Expect = 0.020
Identities = 53/183 (28%), Positives = 79/183 (43%), Gaps = 8/183 (4%)
Frame = +3
Query: 189 INIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 362
+ + V+G D GKST G L C G K I F + E+ G K + V + +
Sbjct: 169 VRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDVIG 225
Query: 363 ERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITGTS--QADCAVLIVAAG 524
RG ++ A E S VT+ID G + K I G + A L+VAA
Sbjct: 226 FDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVAA- 284
Query: 525 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 704
+ GI+ TREH L L + ++ + KMD + ++I K+VS+ +
Sbjct: 285 ----DRGIT--WATREHLGLIAALNIPMFVL-ITKMDLVD----RQGLKKIIKDVSNLVA 333
Query: 705 KIG 713
K G
Sbjct: 334 KAG 336
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.5 bits (83), Expect = 0.020
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +3
Query: 423 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 602
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 603 KQLIVGVNKMDSTEPPYSEPRFEEI 677
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 34.3 bits (75), Expect = 0.19
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +3
Query: 192 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 371
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 372 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 530
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 34.3 bits (75), Expect = 0.19
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +3
Query: 192 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 371
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 372 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 530
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.33
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 628 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 500
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.75
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +3
Query: 432 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 611
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 612 IVGVNKMDSTEPPYSEPR 665
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 270 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 371
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 270 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 371
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 691 PHTSRRLATTQLLSLSCPFLD 753
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 691 PHTSRRLATTQLLSLSCPFLD 753
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 691 PHTSRRLATTQLLSLSCPFLD 753
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 691 PHTSRRLATTQLLSLSCPFLD 753
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical
protein B0205.1b protein.
Length = 720
Score = 29.1 bits (62), Expect = 7.0
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Frame = +3
Query: 456 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 623
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 445 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 504
Query: 624 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 773
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 505 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 564
Query: 774 EPSTKMPWFKGWQVER 821
+P + M +G +R
Sbjct: 565 DPISSMNIGRGTLAQR 580
>AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical
protein B0205.1a protein.
Length = 745
Score = 29.1 bits (62), Expect = 7.0
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Frame = +3
Query: 456 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 623
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 470 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 529
Query: 624 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 773
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 530 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 589
Query: 774 EPSTKMPWFKGWQVER 821
+P + M +G +R
Sbjct: 590 DPISSMNIGRGTLAQR 605
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 9.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 189 INIVVIGHVDSGKSTTT 239
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 9.3
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -3
Query: 611 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 453
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 452 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 333
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,084,374
Number of Sequences: 27780
Number of extensions: 509174
Number of successful extensions: 1466
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1444
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3547715720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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