Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_C14
         (1317 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...   107   8e-22
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    75   4e-12
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    66   3e-09
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    56   2e-06
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ...    50   2e-04
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ...    45   0.005
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE...    36   3.1  

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score =  107 bits (256), Expect = 8e-22
 Identities = 54/88 (61%), Positives = 55/88 (62%)
 Frame = +3

Query: 681 IGSAPLTSITKIXAQVXGGETRQDYXHTRXFPLEAPSXAXLXRPWXLXDTCPXFSXREGW 860
           IGSAPLTSITKI AQV GGETRQDY  TR FPLEAPS A L RP  L DTCP FS RE W
Sbjct: 18  IGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAW 77

Query: 861 GFXIXXAVXXXIRXRXXXXXXGXXXKPP 944
            F I  AV   +R R           PP
Sbjct: 78  RFLIAHAVGISVRCRSFAPSWAVCTNPP 105


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 74.9 bits (176), Expect = 4e-12
 Identities = 48/111 (43%), Positives = 53/111 (47%)
 Frame = +3

Query: 489 GALPXPRXXXXCARXXGCGERYHLTQRR*YGYPXNQGITQEXTXXQKARXRPGTXKRXGC 668
           G +P PR     AR  GCGERY LT            +        K   RP   +    
Sbjct: 34  GDIPLPRSLTRYARSFGCGERYRLTDG------DGNFLEDTRKTLSKEEIRPRRSR---- 83

Query: 669 WXXXIGSAPLTSITKIXAQVXGGETRQDYXHTRXFPLEAPSXAXLXRPWXL 821
               IGSAPLTSI K  AQ+ GGETRQDY   R FPL APS A L  P+ L
Sbjct: 84  --FSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGL 132


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 65.7 bits (153), Expect = 3e-09
 Identities = 32/44 (72%), Positives = 33/44 (75%)
 Frame = +3

Query: 681 IGSAPLTSITKIXAQVXGGETRQDYXHTRXFPLEAPSXAXLXRP 812
           IGSAPLTSITK  AQ+ GGETRQDY  TR FPL APS A L  P
Sbjct: 54  IGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97


>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 56.0 bits (129), Expect = 2e-06
 Identities = 30/41 (73%), Positives = 30/41 (73%)
 Frame = +2

Query: 494 SSXSSXXXSLRXXVXXRRAVSPHSKAVIRLSTXSGDNAGXN 616
           SS SS   SLR  V  RRAVS HSKAVIRLST SGDNAG N
Sbjct: 18  SSASSLTDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKN 58


>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
           root|Rep: Putative uncharacterized protein - Escherichia
           coli
          Length = 61

 Score = 49.6 bits (113), Expect = 2e-04
 Identities = 25/41 (60%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
 Frame = -2

Query: 644 WPXPGL--LXXCXFLRYPLIXWITVLPPLSEVIPLAAXXXP 528
           W  P L  L  C F  YPLI WITVLPPLSE+ PLAA   P
Sbjct: 16  WLLPVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56


>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. SS
          Length = 114

 Score = 44.8 bits (101), Expect = 0.005
 Identities = 24/77 (31%), Positives = 36/77 (46%)
 Frame = +3

Query: 582 YPXNQGITQEXTXXQKARXRPGTXKRXGCWXXXIGSAPLTSITKIXAQVXGGETRQDYXH 761
           +P N  I  +    + +   P T            S PLT+ITKI  Q    +T+ +Y +
Sbjct: 38  HPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKY 97

Query: 762 TRXFPLEAPSXAXLXRP 812
           T  FPL++PS + L  P
Sbjct: 98  TTPFPLQSPSYSLLFPP 114


>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
           Myxococcus xanthus
          Length = 486

 Score = 35.5 bits (78), Expect = 3.1
 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +3

Query: 441 CINESANSRGXXVXXXGALPXPRXXXXCARXXGCGERYHL-TQRR*YGYPXNQGITQ 608
           CI + A +R   V    ALP  R    C R  GCG      +  R YG P  QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,679,292
Number of Sequences: 1657284
Number of extensions: 8173118
Number of successful extensions: 7363
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7330
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 135653814265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)