Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_C06
         (1273 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    27   0.40 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           24   2.1  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   4.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   6.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   6.4  

>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 26.6 bits (56), Expect = 0.40
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +1

Query: 688 QTNKGPLYYIVKPNNF--NAANNLEQSTILPQTSALNNDASYIIRYTNKQPNEFSNVP 855
           + N G    I  P  F    ANNL QSTIL  T   N D S+  +  + +  + SN P
Sbjct: 10  EINNGETIIISCPGGFVMEDANNLTQSTIL-TTCESNTDFSFGSKTIDFRKIQCSNSP 66


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 10/38 (26%), Positives = 22/38 (57%)
 Frame = +1

Query: 814 RYTNKQPNEFSNVPKNNDDTSNMNXGSQNSNHQSTHNT 927
           ++ N QP+  +N   NN+  ++ N   +N+ + + +NT
Sbjct: 363 QWRNNQPSTSNNRWHNNNGNNSNNHWRKNNPNDNRNNT 400


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 265 PDLGDLIIERRNHKVPHDLRN 327
           PDL  L++E R  K+ HD  N
Sbjct: 221 PDLIHLLMEARKGKLKHDNSN 241


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 117 FYRINNAARIPETPFINSDPGKLSSKTVI 203
           FYR +    IP  P ++  P  LSS   I
Sbjct: 221 FYRFSPTGLIPPHPGLSPHPPHLSSHPAI 249


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 117 FYRINNAARIPETPFINSDPGKLSSKTVI 203
           FYR +    IP  P ++  P  LSS   I
Sbjct: 113 FYRFSPTGLIPPHPGLSPHPPHLSSHPAI 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,224
Number of Sequences: 336
Number of extensions: 5297
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 37405004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)