Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_C06
(1273 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 35 0.028
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa... 33 0.084
SPBC6B1.03c |||Pal1 family protein|Schizosaccharomyces pombe|chr... 32 0.19
SPAC20G8.01 |cdc17||ATP-dependent DNA ligase Cdc17|Schizosacchar... 31 0.45
SPBC30B4.03c |||conserved protein |Schizosaccharomyces pombe|chr... 30 0.78
SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps90... 29 1.0
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 1.8
SPAC17C9.14 |||Pex19 protein family|Schizosaccharomyces pombe|ch... 27 4.2
SPBC19G7.06 |mbx1||MADS-box transcription factor Mbx1|Schizosacc... 27 5.5
SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity fac... 27 5.5
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 27 5.5
SPCC4B3.07 |||nuclear pore associated protein|Schizosaccharomyce... 27 5.5
SPAC1F7.05 |cdc22||ribonucleoside reductase large subunit Cdc22|... 27 5.5
SPAC8E11.05c |||conserved fungal protein|Schizosaccharomyces pom... 27 7.3
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 27 7.3
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 26 9.7
SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4 |Schizosac... 26 9.7
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 26 9.7
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 26 9.7
SPAC20H4.10 |ufd2||ubiquitin-protein ligase E4 |Schizosaccharomy... 26 9.7
SPBC3B8.09 |||U3 snoRNP-associated protein Utp3 |Schizosaccharom... 26 9.7
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 34.7 bits (76), Expect = 0.028
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 9/155 (5%)
Frame = +1
Query: 487 IVSQDKVAFTNDNGNLYQSKESHSENSGTSTQDTVP--KIIYVQTDGL----QDNQLYQV 648
+ S+ K N + QS+ +S+NSG + K ++ + L Q L
Sbjct: 433 VESEAKNLMNKTNYSANQSQNGNSQNSGNPVSQAIDLAKSLFQNRNLLTKLAQSGVLTNA 492
Query: 649 A-GSSGDSIIMSRAQTNKGPLYYIVKPNNFNAANNLEQSTILPQTSALNNDASYIIRYTN 825
A GSSG + + A + + NN N++NN S S +N+ S + + ++
Sbjct: 493 AQGSSGG--LSAAAVSGLIGSFMGSSSNNSNSSNN--NSNTSNNNSNTSNNESMVSKLSS 548
Query: 826 KQ--PNEFSNVPKNNDDTSNMNXGSQNSNHQSTHN 924
+ F NN++ +N N G+ N+N+ +N
Sbjct: 549 LSGMASSFLGSSGNNNNNNNSNSGNYNNNNSGNNN 583
Score = 31.1 bits (67), Expect = 0.34
Identities = 27/128 (21%), Positives = 53/128 (41%)
Frame = +1
Query: 535 YQSKESHSENSGTSTQDTVPKIIYVQTDGLQDNQLYQVAGSSGDSIIMSRAQTNKGPLYY 714
+ S++ NS + +T + ++L ++G + S + S N
Sbjct: 512 FMGSSSNNSNSSNNNSNTSNNNSNTSNNESMVSKLSSLSGMAS-SFLGSSGNNNNNNNSN 570
Query: 715 IVKPNNFNAANNLEQSTILPQTSALNNDASYIIRYTNKQPNEFSNVPKNNDDTSNMNXGS 894
NN N+ NN +Q +S+L AS + ++ N+ + NN + N N +
Sbjct: 571 SGNYNNNNSGNNNQQHQ--QSSSSLQGLASSFLNSSSGNSNKQNYNNNNNQNYGNNNNQN 628
Query: 895 QNSNHQST 918
N+N+ S+
Sbjct: 629 YNNNNNSS 636
>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 639
Score = 33.1 bits (72), Expect = 0.084
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = +1
Query: 679 SRAQTNKGPLYYIVKPNNFNAANNLEQSTILPQTSALNNDASYIIR-YTNKQPNEFS--- 846
+R + G YY V P+ ++ + T P S LN + ++R K PN S
Sbjct: 247 TRKDSGNGATYYKVIPDP-----SVNKDT--PTESDLNRLKADLLRAQLKKDPNYESLER 299
Query: 847 NVPKNNDDTSNMNXGSQNSNHQSTHNTIRSDKNNPTVDNFLQ 972
K DD N S+NSN Q+T + + + ++PT+D +Q
Sbjct: 300 EYQKACDDFENSLHPSENSNSQATIPSKKRNFDDPTIDEMVQ 341
>SPBC6B1.03c |||Pal1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 31.9 bits (69), Expect = 0.19
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 649 AGSSGDSIIMSRAQTNKGPLYYIVKPNNFNAANNLEQSTILPQTSALNNDASYIIRYTNK 828
A +S + S+++ N P + + PNN E++ + +ND+S + TN+
Sbjct: 174 AATSPIAAFSSQSEANSLPAFLL--PNNSKGVEKSEEN----EDGVTDNDSSNVNSSTNE 227
Query: 829 QPNEFS-NVPKNNDDTSN 879
PN NV N+D T N
Sbjct: 228 SPNPTDINVCSNDDATDN 245
>SPAC20G8.01 |cdc17||ATP-dependent DNA ligase
Cdc17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 768
Score = 30.7 bits (66), Expect = 0.45
Identities = 24/109 (22%), Positives = 47/109 (43%)
Frame = +1
Query: 268 DLGDLIIERRNHKVPHDLRNVENPSQRPEHRDPQDYSALNERKSQDKHTENLIPNLTNSH 447
D+ + I +HK H VE + ++ S +RK + + + + N+H
Sbjct: 26 DISNFFISSASHKSEH----VEVSQSSSDSKNVDGRSTSEKRKVES--VKLVDESKHNNH 79
Query: 448 KSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKESHSENSGTSTQDTVP 594
G ++++ +IVS+ K T + + S + +SG ST +P
Sbjct: 80 DDTGTQNVERENNIVSEAKKQKTLGSSSSSSDAVSSNNDSGASTPIPLP 128
>SPBC30B4.03c |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 29.9 bits (64), Expect = 0.78
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 778 TSALNNDASYIIRYTNKQPNEFSNVPKNNDDTSNMNXGSQNSNHQSTHNTIRSDKNNPTV 957
TSAL+ A+ + + Q + SN+P N S N +N + S + R K PT+
Sbjct: 255 TSALHKFATALQQQHQMQKSTSSNIPYANPAPSGFNGSPRNGDVASLASNYRYAKQPPTM 314
Score = 27.5 bits (58), Expect = 4.2
Identities = 27/96 (28%), Positives = 36/96 (37%), Gaps = 8/96 (8%)
Frame = +1
Query: 760 STILPQTSALNNDASYIIRYTNKQPNEFSNVPKNNDD---TSNMNXGSQ----NSNHQST 918
+T L Q + S I Y N P+ F+ P+N D SN Q +N S
Sbjct: 262 ATALQQQHQMQKSTSSNIPYANPAPSGFNGSPRNGDVASLASNYRYAKQPPTMPANAISQ 321
Query: 919 HNTIRSDKNNPTVD-NFLQMXMGIERXXXGXNQAIK 1023
N + N P +D + L M I Q IK
Sbjct: 322 ANRLLDQNNIPNMDPSILPQSMPIASVPPYSLQGIK 357
>SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps901
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 537
Score = 29.5 bits (63), Expect = 1.0
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Frame = +1
Query: 268 DLGDLIIERRN----HKVPHD------LRNVENPSQRPEHRD-PQDYSALNERKSQDKHT 414
DL D + E+RN H HD +RN+E+ + + E D D +NE++S DK
Sbjct: 33 DLNDSLDEQRNAYNEHCKNHDQQPSQQVRNMEDEANQYEQTDSSSDQEVMNEKQSLDKEN 92
Query: 415 EN-LIPNLTN 441
N IP+ N
Sbjct: 93 RNDNIPHENN 102
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Frame = +1
Query: 289 ERRNHKVPHDLRNVENPSQRPEHRDPQD---YSALNERK----SQDKHTENLIPNLTNSH 447
++ +HK P D + + P + H+ P+D + +++ ++KH E N+ +SH
Sbjct: 379 DKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHQGPKEKHNERPEQNMQSSH 438
Query: 448 K 450
+
Sbjct: 439 E 439
Score = 27.9 bits (59), Expect = 3.2
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +1
Query: 289 ERRNHKVPHDLRNVENPSQRPEHRDPQDYSALNERKSQDKH 411
++ +HK P D + + P + H+ P+D K ++ H
Sbjct: 361 DKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHH 401
Score = 27.9 bits (59), Expect = 3.2
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +1
Query: 289 ERRNHKVPHDLRNVENPSQRPEHRDPQDYSALNERKSQDKH 411
++ +HK P D + + P + H+ P+D K ++ H
Sbjct: 370 DKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHH 410
>SPAC17C9.14 |||Pex19 protein family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 232
Score = 27.5 bits (58), Expect = 4.2
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 259 NIPDLGDLIIERRNHKVPHDLRNVENPSQRPEHRDPQDYSALNERKSQDKHTENLIPNLT 438
N DL DL + VP +N E EH+ + S NER D + +LI +
Sbjct: 23 NFDDLDDLDDILDDLDVPSAFKN-EEKKNIDEHKQTGNTSKENERIKNDDNLNSLIQEMM 81
Query: 439 NSHKSY-GYTGID 474
+ + G +G+D
Sbjct: 82 SKFEDLGGPSGLD 94
>SPBC19G7.06 |mbx1||MADS-box transcription factor
Mbx1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 27.1 bits (57), Expect = 5.5
Identities = 24/103 (23%), Positives = 37/103 (35%), Gaps = 3/103 (2%)
Frame = +1
Query: 412 TENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNG--NLYQSKESHSENSGTSTQD 585
T+N IP LT ++YG + D S V + + NG + + SH+ G +
Sbjct: 211 TDNFIPFLTPKRQAYGQSSSRADRSSVRRSQSFKNRRNGKPRISRLHTSHASIDGLTDFI 270
Query: 586 TVPKIIYVQTDGLQDNQLYQVAGSSGDSIIMSR-AQTNKGPLY 711
P Y+ L + Q N+G LY
Sbjct: 271 QSPSSGYLDPSSTPITPLDSAINQITPPFLPDNLGQENRGELY 313
>SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity factor
complex subunit, Fip1 homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 344
Score = 27.1 bits (57), Expect = 5.5
Identities = 19/81 (23%), Positives = 32/81 (39%)
Frame = +1
Query: 724 PNNFNAANNLEQSTILPQTSALNNDASYIIRYTNKQPNEFSNVPKNNDDTSNMNXGSQNS 903
PN + NN S ++ A + + + T+ QP N ++N N S
Sbjct: 248 PNAY-VNNNPSSSRRESESPANSPNITSSAGMTHAQPTHNPTSSYGNGASTNYNASRPPS 306
Query: 904 NHQSTHNTIRSDKNNPTVDNF 966
NH + N S + P+ D +
Sbjct: 307 NHPHSSNYPSSSRRKPSPDRY 327
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 745 NNLEQSTILPQTSALNNDASYIIRYTNKQPNEFSNVPKNNDDTSNMNXGSQNSNHQSTHN 924
N+ Q+T +A N + I+Y + E+S ++ + +N S S HQ + +
Sbjct: 514 NSKVQTTSRASENADTNKTQHNIKYIDSYVPEYSIARQSANQKTNEQHPSSTSLHQQSTS 573
Query: 925 TIRSDK--NNPTVDN 963
++S N VD+
Sbjct: 574 DLKSPSFHENSNVDD 588
>SPCC4B3.07 |||nuclear pore associated protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 393
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +1
Query: 469 IDKDESIVSQDKVAFTNDNGNLYQSKESHSENSGTSTQDTVPKIIYVQTDGL 624
+ K + + Q + A +GN SKE+ SEN + ++Y + D +
Sbjct: 15 LKKQQQLEKQKQEASYELSGNSSPSKENGSENVDNGEMEDETMLVYTEEDNI 66
>SPAC1F7.05 |cdc22||ribonucleoside reductase large subunit
Cdc22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 706 LYYIVKPNNFNAANNLEQSTILPQTSALNNDASYIIRYTNKQPNEFS 846
++ I ++ A N + I+P NN A Y+ + NK+P F+
Sbjct: 252 IHNIRATGSYIAGTNGTSNGIVPMIRVYNNTARYVDQGGNKRPGAFA 298
>SPAC8E11.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 338
Score = 26.6 bits (56), Expect = 7.3
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1
Query: 259 CSFHQENLHHNNHSRFRSHITVFEDSL 179
CS +++ L H +H + HI + E +L
Sbjct: 257 CSINKDALTHRSHESLQQHIELLESTL 283
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 26.6 bits (56), Expect = 7.3
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +1
Query: 655 SSGDSIIMSRAQTNKGPLYYIVKPNNFNAANNLEQSTILPQTSALNNDASYIIRYTNKQP 834
SSGDS +S + ++KG L + N + ++N E L ++ L + S N+
Sbjct: 238 SSGDSTPLSGSSSSKGMLMSMSTSENHSLSSNPE----LSNSNLLAKNESPADVSNNESG 293
Query: 835 NEFSNVPKNNDDT 873
NE S P T
Sbjct: 294 NESSKEPDKEHST 306
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 26.2 bits (55), Expect = 9.7
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 718 VKPNNFNAANNLEQSTILPQTSALNNDASYIIRYTNKQPNEFSNV 852
+KP +FNA N+ Q+T+ L +SY+ + P NV
Sbjct: 614 LKPLSFNAVNSYVQATLHRTDDGLARFSSYVYHISKGVPLLVRNV 658
>SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 446
Score = 26.2 bits (55), Expect = 9.7
Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = +1
Query: 373 YSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKES 552
+ LNE +D + I L + YG + +++ + GN K S
Sbjct: 92 FGKLNENTVKDN--VSFIFELLDEMIDYGIIQTTEPDALARSVSITAVKKKGNALSLKRS 149
Query: 553 HSENSGTSTQDTVPKIIYVQTDGL--QDNQLY 642
HS +T +P + + G+ + N +Y
Sbjct: 150 HSSQLAHTTSSEIPGSVPWRRAGIKYRKNSIY 181
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/57 (22%), Positives = 29/57 (50%)
Frame = +1
Query: 283 IIERRNHKVPHDLRNVENPSQRPEHRDPQDYSALNERKSQDKHTENLIPNLTNSHKS 453
++E+R + + D ++ E + HR QD S ER ++H+ + + S+++
Sbjct: 153 LMEKRKYSLDSDRKSKERRHRDRHHRSNQDRS--RERSDNEQHSSDKREHSRRSYRN 207
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 26.2 bits (55), Expect = 9.7
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Frame = +1
Query: 679 SRAQTNKGPLYYIVKP----NNFNAANNLEQSTILPQTSALNNDASYIIRYTNKQPNEFS 846
++ TN L + +P N+ + NL+ S +L + +N TN S
Sbjct: 59 NKESTNLDDLNMLEEPEHHDNSKKESTNLDDSNMLEEPKHHDNSNK---ESTNLDDLNMS 115
Query: 847 NVPKNNDDTSNMNXGSQNSNHQSTHN 924
PK++D ++ + NSN + N
Sbjct: 116 EEPKHHDSSNKESTNLDNSNMDESEN 141
>SPAC20H4.10 |ufd2||ubiquitin-protein ligase E4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1010
Score = 26.2 bits (55), Expect = 9.7
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +2
Query: 356 IATLKITRLLMNESLRISILKI*YLT*QIVINPMVTLV*I-RTSLLLVKTKWRLQMIMGI 532
++ L + N LR + +I Y Q + L+ + RTS V T+W L +M
Sbjct: 618 VSFLTQANYIKNPYLRAKLAEILYFGVQTHVGRSELLLDVVRTSK--VATRWLLPALMAF 675
Query: 533 YIKVKNLIPKTQ 568
YI++++ TQ
Sbjct: 676 YIEIESTGQSTQ 687
>SPBC3B8.09 |||U3 snoRNP-associated protein Utp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 597
Score = 26.2 bits (55), Expect = 9.7
Identities = 20/88 (22%), Positives = 38/88 (43%)
Frame = +1
Query: 439 NSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKESHSENSGTSTQDTVPKIIYVQTD 618
N+ +Y +DE +QDK+ F DNG E S+ + + + + +
Sbjct: 29 NAINTYEDVANSEDEFYNAQDKILFDADNGEQADELEL-SDEELVALESSSDEEDGNAEE 87
Query: 619 GLQDNQLYQVAGSSGDSIIMSRAQTNKG 702
L +N+ +++G D++ NKG
Sbjct: 88 NLSENE--ELSGKKKDAVNEEELYDNKG 113
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,183,725
Number of Sequences: 5004
Number of extensions: 86666
Number of successful extensions: 331
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 326
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 691537944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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