Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_C06
(1273 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 27 0.26
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 25 1.1
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 25 1.4
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 25 1.9
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 4.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 4.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 4.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 4.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 4.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 4.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 4.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 4.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 4.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 4.3
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 23 5.7
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 23 7.5
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 7.5
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 7.5
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 27.5 bits (58), Expect = 0.26
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 823 NKQPNEFSNVPKNNDDTSNMNXGSQNSNHQSTHN 924
NKQ + N + ND+ N N + N N+Q+ +N
Sbjct: 498 NKQNDNKQNGNRQNDNKRNGNRQNDNQNNQNDNN 531
Score = 27.1 bits (57), Expect = 0.35
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 823 NKQPNEFSNVPKNNDDTSNMNXGSQNSNHQSTHNTIRSDKN-NPTVDN 963
N + + N N + N N +QN+N+Q+ N + +N N DN
Sbjct: 416 NTRCGRYHNQNAGNQNADNQNADNQNANNQNADNQNANKQNGNRQNDN 463
Score = 27.1 bits (57), Expect = 0.35
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 823 NKQPNEFSNVPKNNDDTSNMNXGSQNSNHQSTHNTIRSDK 942
NKQ N K N + N N +QN N+++ + S K
Sbjct: 503 NKQNGNRQNDNKRNGNRQNDNQNNQNDNNRNDNQVHHSSK 542
Score = 26.2 bits (55), Expect = 0.61
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +1
Query: 823 NKQPNEFSNVPKNNDDTSN---MNXGSQNSNHQSTHNTIRSDKN 945
NKQ N K ND+ N N +N N Q+ + ++D N
Sbjct: 488 NKQNGNRQNGNKQNDNKQNGNRQNDNKRNGNRQNDNQNNQNDNN 531
Score = 25.0 bits (52), Expect = 1.4
Identities = 14/47 (29%), Positives = 17/47 (36%)
Frame = +1
Query: 823 NKQPNEFSNVPKNNDDTSNMNXGSQNSNHQSTHNTIRSDKNNPTVDN 963
N N NN + N N QN N Q+ N +K N N
Sbjct: 431 NADNQNADNQNANNQNADNQNANKQNGNRQN-DNRQNDNKQNGNRQN 476
Score = 24.2 bits (50), Expect = 2.5
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +1
Query: 727 NNFNAAN-NLEQSTILPQTSALNNDASYIIRYTNKQPNEFSNVPKNNDDTSNMNXGSQNS 903
NN NA N N + Q ND + N+Q + N + ND+ N N + N
Sbjct: 443 NNQNADNQNANKQNGNRQNDNRQNDNK---QNGNRQNDNKQNGNRQNDNKQNGNRQNGNK 499
Query: 904 NHQSTHNTIRSDKN 945
+ + N R + N
Sbjct: 500 QNDNKQNGNRQNDN 513
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 25.4 bits (53), Expect = 1.1
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = +1
Query: 835 NEFSNVPKNNDDTSNMNXGSQNSNHQSTHNTIRSDKNN 948
N +N NN++ +N N + +N N ++ NN
Sbjct: 232 NANTNASNNNNNNNNNNNNNNGANDNGNGNGASNNNNN 269
Score = 24.6 bits (51), Expect = 1.9
Identities = 17/64 (26%), Positives = 24/64 (37%)
Frame = +1
Query: 793 NDASYIIRYTNKQPNEFSNVPKNNDDTSNMNXGSQNSNHQSTHNTIRSDKNNPTVDNFLQ 972
N + I N N +N NN++ +N N + N N N NN D F
Sbjct: 222 NSNNSTITAGNANTNASNNNNNNNNNNNNNNGANDNGNGNGASN------NNNNGDMFCH 275
Query: 973 MXMG 984
+G
Sbjct: 276 TGLG 279
Score = 23.4 bits (48), Expect = 4.3
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +1
Query: 856 KNNDDTSNMNXGSQNSNHQSTHNTIRSDKNN 948
+ N + S + G+ N+N + +N ++ NN
Sbjct: 220 QRNSNNSTITAGNANTNASNNNNNNNNNNNN 250
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 25.0 bits (52), Expect = 1.4
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +1
Query: 859 NNDDTSNMNXGSQNSNHQSTH-NTIRSDKNNPTVDN 963
NN + + N +QN N+Q + + KNN DN
Sbjct: 417 NNQNDNIQNTNNQNDNNQKNNKKNANNQKNNNQNDN 452
Score = 23.4 bits (48), Expect = 4.3
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +1
Query: 823 NKQPNEFSNVPKNNDDTSNMNXGSQNSNHQSTHN 924
N Q + N NN + +N +N+N+Q +N
Sbjct: 417 NNQNDNIQNT--NNQNDNNQKNNKKNANNQKNNN 448
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 1.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 814 RYTNKQPNEFSNVPKNNDDTSNMNXGSQNSNHQSTHNT 927
R +K+P SN NN ++N N + +N+ + +NT
Sbjct: 73 RERSKEPKIISN---NNSLSNNYNYNNNYNNYNNNYNT 107
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 4.3
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +1
Query: 814 RYTNKQPNEFSNVPK---NNDDTSNMNXGSQNSNHQSTHN 924
R N+ E S PK NN+ SN + N N+ + HN
Sbjct: 66 RSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 4.3
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +1
Query: 814 RYTNKQPNEFSNVPK---NNDDTSNMNXGSQNSNHQSTHN 924
R N+ E S PK NN+ SN + N N+ + HN
Sbjct: 66 RSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 4.3
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +1
Query: 814 RYTNKQPNEFSNVPK---NNDDTSNMNXGSQNSNHQSTHN 924
R N+ E S PK NN+ SN + N N+ + HN
Sbjct: 66 RSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 4.3
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +1
Query: 814 RYTNKQPNEFSNVPK---NNDDTSNMNXGSQNSNHQSTHN 924
R N+ E S PK NN+ SN + N N+ + HN
Sbjct: 66 RSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 4.3
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +1
Query: 814 RYTNKQPNEFSNVPK---NNDDTSNMNXGSQNSNHQSTHN 924
R N+ E S PK NN+ SN + N N+ + HN
Sbjct: 66 RSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 4.3
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +1
Query: 814 RYTNKQPNEFSNVPK---NNDDTSNMNXGSQNSNHQSTHN 924
R N+ E S PK NN+ SN + N N+ + HN
Sbjct: 66 RSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 4.3
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +1
Query: 814 RYTNKQPNEFSNVPK---NNDDTSNMNXGSQNSNHQSTHN 924
R N+ E S PK NN+ SN + N N+ + HN
Sbjct: 66 RSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 4.3
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +1
Query: 814 RYTNKQPNEFSNVPK---NNDDTSNMNXGSQNSNHQSTHN 924
R N+ E S PK NN+ SN + N N+ + HN
Sbjct: 66 RSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHN 105
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.4 bits (48), Expect = 4.3
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +1
Query: 814 RYTNKQPNEFSNVPK---NNDDTSNMNXGSQNSNHQSTHN 924
R N+ E S PK NN+ SN + N N+ + HN
Sbjct: 299 RSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHN 338
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.4 bits (48), Expect = 4.3
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +1
Query: 814 RYTNKQPNEFSNVPK---NNDDTSNMNXGSQNSNHQSTHN 924
R N+ E S PK NN+ SN + N N+ + HN
Sbjct: 299 RSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHN 338
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 5.7
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +1
Query: 814 RYTNKQPNEFSNVPK---NNDDTSNMNXGSQNSNHQSTHN 924
R N+ E S PK NN+ SN + N N+ + HN
Sbjct: 66 RSRNRTERERSKEPKIISNNNPLSNNYNYNNNYNNYNKHN 105
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 22.6 bits (46), Expect = 7.5
Identities = 21/74 (28%), Positives = 41/74 (55%)
Frame = -2
Query: 528 PIIICKRHFVLTNNRLVLIYTSVTIGFMTIC*VRY*IFSMLILRLSFIKSRVILRVAMFW 349
P +I K H++ T L LI +S+ + ++ + ++ FS L ++ ILR+A
Sbjct: 157 PKLIAK-HYLRTWFFLDLI-SSIPLDYIFLIFNQFQDFSESFQILHAGRALRILRLAKLL 214
Query: 348 SLTWILDVAKVMRY 307
SL +L +++++RY
Sbjct: 215 SLVRLLRLSRLVRY 228
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.6 bits (46), Expect = 7.5
Identities = 21/74 (28%), Positives = 41/74 (55%)
Frame = -2
Query: 528 PIIICKRHFVLTNNRLVLIYTSVTIGFMTIC*VRY*IFSMLILRLSFIKSRVILRVAMFW 349
P +I K H++ T L LI +S+ + ++ + ++ FS L ++ ILR+A
Sbjct: 157 PKLIAK-HYLRTWFFLDLI-SSIPLDYIFLIFNQFQDFSESFQILHAGRALRILRLAKLL 214
Query: 348 SLTWILDVAKVMRY 307
SL +L +++++RY
Sbjct: 215 SLVRLLRLSRLVRY 228
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.6 bits (46), Expect = 7.5
Identities = 21/74 (28%), Positives = 41/74 (55%)
Frame = -2
Query: 528 PIIICKRHFVLTNNRLVLIYTSVTIGFMTIC*VRY*IFSMLILRLSFIKSRVILRVAMFW 349
P +I K H++ T L LI +S+ + ++ + ++ FS L ++ ILR+A
Sbjct: 157 PKLIAK-HYLRTWFFLDLI-SSIPLDYIFLIFNQFQDFSESFQILHAGRALRILRLAKLL 214
Query: 348 SLTWILDVAKVMRY 307
SL +L +++++RY
Sbjct: 215 SLVRLLRLSRLVRY 228
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 279,783
Number of Sequences: 438
Number of extensions: 5992
Number of successful extensions: 45
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 43582869
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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