Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_C05
         (1260 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    31   0.071
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.87 
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    26   2.7  
AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450 pr...    25   6.1  
AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 prote...    24   8.1  
AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 prote...    24   8.1  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 31.1 bits (67), Expect = 0.071
 Identities = 27/161 (16%), Positives = 69/161 (42%)
 Frame = +1

Query: 190  ILDAKRLAGRLKERETEADALLSETQATYRQIHTMKQYKEEVDTLNEASRERPRGALIAS 369
            + +  R+   L+E+E E   + +E     +  H   Q KE+ D LN       +     S
Sbjct: 676  VAEINRIQAMLQEKEAELRDISAEVSKIEKTAHRFGQLKEQHDMLNYELNNLKQRLAQTS 735

Query: 370  IERESQLMRGVQRENGELRAALEDHRRALELIMSKYRQHTEKKIWESRIDFTSAINEKQQ 549
             ++  + +  + ++   L+  + + R       +K +   + KI + +      +   ++
Sbjct: 736  FQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKVKD-LQAKIADGKGHRERELKSAEE 794

Query: 550  ELIRQQAERINEMTTVMYKAINMDENSEARKDEELYQRLIT 672
            +L  +++++ +E +   +K    D  +   + EEL + ++T
Sbjct: 795  DL--KRSKKKSEESRKNWKKHEQDFETLKLEIEELQKGIVT 833


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.5 bits (58), Expect = 0.87
 Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
 Frame = +1

Query: 277 RQIHTMKQYKEEVDTLNEASRERPRGALIASIERES--QLMRGVQRENGELRAALEDHRR 450
           + IH   + +EE         ER R A  A+IERE   +L    +RE  E     ++ R 
Sbjct: 435 QSIHERMKLEEEHRAARLREEERAREAREAAIEREKERELREQREREQREKEQREKEQRE 494

Query: 451 ALELIMSKYRQHTEKKIWESRIDFTSAINEKQQELIRQ-QAERINEM 588
             E    +  +   ++    +     A  E+++E  R+ + ER+  M
Sbjct: 495 KEERERQQREKEQREREQREKEREREAARERERERERERERERMMHM 541



 Score = 24.2 bits (50), Expect = 8.1
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = +3

Query: 681  GPERNAGSISKVRV*SCDGASNG--GQGRSNRRPAADGSVTPRAAGTPTDCYLARSQVDP 854
            GP  N G++ K    +    SNG  G G      AA GS     AG+P +    R +  P
Sbjct: 1107 GPSENNGTLDKHHEKAATVNSNGNAGSGGGQANQAAAGS--DGGAGSPAELSGNRERRSP 1164

Query: 855  A 857
            +
Sbjct: 1165 S 1165


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 25.8 bits (54), Expect = 2.7
 Identities = 28/126 (22%), Positives = 52/126 (41%)
 Frame = +1

Query: 307 EEVDTLNEASRERPRGALIASIERESQLMRGVQRENGELRAALEDHRRALELIMSKYRQH 486
           EE  +    +R    G  + S    ++L        GE+R  L D +   E  +   ++ 
Sbjct: 34  EEPSSAGVPARTMATGG-VKSAGTATKLATSTPVSTGEVRRMLADAKADNETTVGIVKR- 91

Query: 487 TEKKIWESRIDFTSAINEKQQELIRQQAERINEMTTVMYKAINMDENSEARKDEELYQRL 666
            E++I   R+    A NE+ +E  R+  E   +      +    +   E RK++EL+  L
Sbjct: 92  LEEQIQLLRLQM-EASNEQLKEAQREAREAREDA-----RVREAEHREELRKEKELFNAL 145

Query: 667 ITENKG 684
           + +  G
Sbjct: 146 LAQTLG 151


>AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 24.6 bits (51), Expect = 6.1
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +1

Query: 223 KERETEADALLSETQATYRQIHTMKQYKEEVDTLNEASRERP 348
           K R+   D +   +  TY  +H MK Y E    +NE+ R+ P
Sbjct: 331 KARQNITDVMKQHSSITYEAVHEMK-YIEM--CINESMRKYP 369


>AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 24.2 bits (50), Expect = 8.1
 Identities = 17/66 (25%), Positives = 27/66 (40%)
 Frame = +3

Query: 732 DGASNGGQGRSNRRPAADGSVTPRAAGTPTDCYLARSQVDPAKYSCLHI*MFLLTKLEMS 911
           DG   G   + N    A+   T   A T   C+L  S     KY+  ++ +    KL+M 
Sbjct: 91  DGDHAGSMKKCNAE--AEKVDTSSKANTFYTCFLGTSSAQAFKYAVDYVELLRAGKLDMG 148

Query: 912 KVSSSG 929
              ++G
Sbjct: 149 TTFNAG 154


>AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 24.2 bits (50), Expect = 8.1
 Identities = 17/66 (25%), Positives = 27/66 (40%)
 Frame = +3

Query: 732 DGASNGGQGRSNRRPAADGSVTPRAAGTPTDCYLARSQVDPAKYSCLHI*MFLLTKLEMS 911
           DG   G   + N    A+   T   A T   C+L  S     KY+  ++ +    KL+M 
Sbjct: 91  DGDHAGSMKKCNAE--AEKVDTSSKANTFYTCFLGTSSAQAFKYAVDYVELLRAGKLDMG 148

Query: 912 KVSSSG 929
              ++G
Sbjct: 149 TTFNAG 154


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,023,382
Number of Sequences: 2352
Number of extensions: 20542
Number of successful extensions: 108
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 108
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 144287691
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)