Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_C04
         (1366 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55453 Cluster: PREDICTED: similar to CG14567-PA...    63   1e-08
UniRef50_Q7KTW1 Cluster: CG33290-PA; n=1; Drosophila melanogaste...    56   2e-06
UniRef50_UPI0000DB6D7C Cluster: PREDICTED: similar to CG33290-PA...    49   2e-04
UniRef50_Q9VNY8 Cluster: CG14567-PA; n=2; Sophophora|Rep: CG1456...    49   2e-04
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru...    38   0.61 

>UniRef50_UPI0000D55453 Cluster: PREDICTED: similar to CG14567-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG14567-PA - Tribolium castaneum
          Length = 135

 Score = 63.3 bits (147), Expect = 1e-08
 Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 13/91 (14%)
 Frame = +1

Query: 139 VFMILGAFVKAQRPFYAGLSPIGYPAV----------ETDLLSNRFGED---EEAPIEVR 279
           VF +  A   AQRP YAG  PIG P +           T  + NR GED      P++ R
Sbjct: 6   VFALFIAATVAQRPTYAGSRPIGRPDLASRFKDPEEQSTVAVYNRVGEDGTTARIPVDAR 65

Query: 280 GDGNLINRLNSLPIENQPFWYLNWKAYEALR 372
           GDG L++RLN  P E++PFW LN    EA R
Sbjct: 66  GDGQLVDRLNQWPREHRPFWLLNADHIEASR 96


>UniRef50_Q7KTW1 Cluster: CG33290-PA; n=1; Drosophila
           melanogaster|Rep: CG33290-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 171

 Score = 56.4 bits (130), Expect = 2e-06
 Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
 Frame = +1

Query: 250 EDEEAPIEVRGDGNLINRLNSLPIENQPFWYLNWKAYEALRKRPQ----TFQQRPNNF 411
           ++   PI+ RGD + +NRL  LP++ QPFW +N++A EA+R  P+     ++ R N+F
Sbjct: 112 DNSRLPIDARGDRDWVNRLKQLPVDQQPFWLVNYQAIEAMRNNPRPNVGNYEWRGNSF 169


>UniRef50_UPI0000DB6D7C Cluster: PREDICTED: similar to CG33290-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG33290-PA - Apis mellifera
          Length = 138

 Score = 49.2 bits (112), Expect = 2e-04
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
 Frame = +1

Query: 259 EAPIEVRGDGNLINRLNSLPIENQPFWYLNWKAYEALR----KRPQTFQQRPN 405
           + P++  G+ NL+NR+ + P E QPFWY+NW+  +  R     R Q  Q  PN
Sbjct: 79  DLPVDALGNINLVNRIKTWPREKQPFWYINWQQIQEHRGDSKNRAQLVQTEPN 131


>UniRef50_Q9VNY8 Cluster: CG14567-PA; n=2; Sophophora|Rep:
           CG14567-PA - Drosophila melanogaster (Fruit fly)
          Length = 190

 Score = 49.2 bits (112), Expect = 2e-04
 Identities = 18/38 (47%), Positives = 27/38 (71%)
 Frame = +1

Query: 259 EAPIEVRGDGNLINRLNSLPIENQPFWYLNWKAYEALR 372
           + PI+  GD   +N L+ LP+E QPFW++N++A EA R
Sbjct: 134 QLPIDAHGDREWVNHLSQLPVEQQPFWFINYQAIEAHR 171


>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
           Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
           (SV40)
          Length = 364

 Score = 37.9 bits (84), Expect = 0.61
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 779 DPDMIRYIDELGQXTTXMQ 835
           DPDMIRYIDE GQ TT MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,024,959,823
Number of Sequences: 1657284
Number of extensions: 18466276
Number of successful extensions: 36610
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36592
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 142132802409
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)