Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_C03
         (1272 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030421-1|ABO52841.1|  491|Drosophila melanogaster IP17579p pro...    30   7.8  
AE014297-422|AAN13235.1|  741|Drosophila melanogaster CG15593-PB...    30   7.8  

>BT030421-1|ABO52841.1|  491|Drosophila melanogaster IP17579p
           protein.
          Length = 491

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = -3

Query: 187 KKTPKXXKKAXKXKKKXAXXXXXQKXXXXKKRRXKXGKXTKTKTK 53
           KK  K  KK  K KKK       +K    KK++ K  K  K K K
Sbjct: 445 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 489



 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = -3

Query: 187 KKTPKXXKKAXKXKKKXAXXXXXQKXXXXKKRRXKXGKXTKTKTK 53
           KK  K  KK  K KKK       +K    KK++ K  K  K K K
Sbjct: 446 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 490



 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = -3

Query: 187 KKTPKXXKKAXKXKKKXAXXXXXQKXXXXKKRRXKXGKXTKTKTK 53
           KK  K  KK  K KKK       +K    KK++ K  K  K K K
Sbjct: 447 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 491


>AE014297-422|AAN13235.1|  741|Drosophila melanogaster CG15593-PB,
           isoform B protein.
          Length = 741

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 18/42 (42%), Positives = 19/42 (45%)
 Frame = -2

Query: 188 KKNPKXXKKSKXXXKKKXXXXXXPEAXTXKKTSXKXRKXDKN 63
           KK PK  KKSK   KKK            KKT  K +  DKN
Sbjct: 567 KKKPKKQKKSKK--KKKKDKYKKKNKKCSKKTGRKKKDKDKN 606


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,577,025
Number of Sequences: 53049
Number of extensions: 111202
Number of successful extensions: 408
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 351
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6845363280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)