Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_C02
         (1297 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   2.8  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   6.4  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 2.8
 Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 3/27 (11%)
 Frame = +1

Query: 934  GGXXXXKPPPPPXKKXXXXPP---PPP 1005
            GG     PPPPP       PP   PPP
Sbjct: 525  GGPLGPPPPPPPGGAVLNIPPQFLPPP 551



 Score = 24.2 bits (50), Expect = 8.4
 Identities = 22/94 (23%), Positives = 24/94 (25%)
 Frame = +2

Query: 758  GXXGXKKXXXAXGXPPXFXXPPPXKKKNXFFXXGGXPPPPXXXXGXXXXFFXXKKKXXGG 937
            G  G        G PP    PPP             PPP              + +   G
Sbjct: 517  GYDGRDLTGGPLGPPP----PPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAG 572

Query: 938  GGXXXNPPPPPKKXXXXXPPPPPXXXXGGXXTXP 1039
                 N  PPP         PPP    GG    P
Sbjct: 573  FPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGP 606


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 6.4
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -2

Query: 1005 GGGGGXXXXFFXGGGGGFXXXPPP 934
            G GGG       GGGGG    P P
Sbjct: 201  GAGGGGSGGGAPGGGGGSSGGPGP 224


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.156    0.531 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,406
Number of Sequences: 2352
Number of extensions: 14615
Number of successful extensions: 32
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 149192655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)