Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_C02
(1297 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 42 7e-04
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 42 7e-04
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 42 7e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 39 0.007
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 39 0.007
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 38 0.015
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 38 0.015
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 36 0.047
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.19
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.19
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.19
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 27 0.20
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 34 0.25
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 34 0.25
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.3
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 31 1.8
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 31 1.8
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.8
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 31 2.3
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 31 2.3
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 30 3.1
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 30 3.1
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 30 3.1
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 30 4.1
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 30 4.1
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 30 4.1
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 4.1
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 30 4.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 4.1
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 30 4.1
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 5.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 5.4
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 25 7.0
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 29 7.2
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 9.5
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 9.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 9.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 9.5
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 9.5
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 9.5
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 9.5
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 9.5
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 29 9.5
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 29 9.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 42.3 bits (95), Expect = 7e-04
Identities = 26/82 (31%), Positives = 26/82 (31%)
Frame = +2
Query: 794 GXPPXFXXPPPXKKKNXFFXXGGXPPPPXXXXGXXXXFFXXKKKXXGGGGXXXNPPPPPK 973
G PP PPP G PPPP G G PPPPP
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI-----------SGGPPPPPPPPG 766
Query: 974 KXXXXXPPPPPXXXXGGXXTXP 1039
PPPPP GG P
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPP 788
Score = 35.1 bits (77), Expect = 0.11
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPPXXXXGGXXNXPP 1041
PPPPP PPPPP GG PP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 34.3 bits (75), Expect = 0.19
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 958 PPPPXKKXXXXPPPPPXXXXGGXXNXPP 1041
PPPP PPPPP GG PP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 33.5 bits (73), Expect = 0.33
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPPXXXXGGXXNXPP 1041
PPPPP PPPPP G PP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 32.3 bits (70), Expect = 0.77
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPPXXXXGGXXNXPP 1041
PPPPP PPPPP G PP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 934 GGXXXXKPPPPPXKKXXXXPPPPP 1005
GG PPPPP PPPPP
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 30.7 bits (66), Expect = 2.3
Identities = 23/78 (29%), Positives = 24/78 (30%), Gaps = 5/78 (6%)
Frame = +3
Query: 858 GGXPPPXXXXXGXGXXFFXXKKXXGGGXXXXXTPPPPXKKXXXXX-----PPPPPXXXGG 1022
GG PPP G GG PPPP PPPPP G
Sbjct: 711 GGPPPPPGLPPITGGP--PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC 768
Query: 1023 XXXPXPXXXXKXRGGXXP 1076
P P +GG P
Sbjct: 769 PPPPPPPPPGGFKGGPPP 786
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPPXXXXGGXXNXPP 1041
PPPP PPPP GG PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 42.3 bits (95), Expect = 7e-04
Identities = 26/82 (31%), Positives = 26/82 (31%)
Frame = +2
Query: 794 GXPPXFXXPPPXKKKNXFFXXGGXPPPPXXXXGXXXXFFXXKKKXXGGGGXXXNPPPPPK 973
G PP PPP G PPPP G G PPPPP
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI-----------SGGPPPPPPPPG 766
Query: 974 KXXXXXPPPPPXXXXGGXXTXP 1039
PPPPP GG P
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPP 788
Score = 35.1 bits (77), Expect = 0.11
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPPXXXXGGXXNXPP 1041
PPPPP PPPPP GG PP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 34.3 bits (75), Expect = 0.19
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 958 PPPPXKKXXXXPPPPPXXXXGGXXNXPP 1041
PPPP PPPPP GG PP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 33.5 bits (73), Expect = 0.33
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPPXXXXGGXXNXPP 1041
PPPPP PPPPP G PP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 32.3 bits (70), Expect = 0.77
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPPXXXXGGXXNXPP 1041
PPPPP PPPPP G PP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 934 GGXXXXKPPPPPXKKXXXXPPPPP 1005
GG PPPPP PPPPP
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 30.7 bits (66), Expect = 2.3
Identities = 23/78 (29%), Positives = 24/78 (30%), Gaps = 5/78 (6%)
Frame = +3
Query: 858 GGXPPPXXXXXGXGXXFFXXKKXXGGGXXXXXTPPPPXKKXXXXX-----PPPPPXXXGG 1022
GG PPP G GG PPPP PPPPP G
Sbjct: 711 GGPPPPPGLPPITGGP--PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC 768
Query: 1023 XXXPXPXXXXKXRGGXXP 1076
P P +GG P
Sbjct: 769 PPPPPPPPPGGFKGGPPP 786
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPPXXXXGGXXNXPP 1041
PPPP PPPP GG PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 42.3 bits (95), Expect = 7e-04
Identities = 26/82 (31%), Positives = 26/82 (31%)
Frame = +2
Query: 794 GXPPXFXXPPPXKKKNXFFXXGGXPPPPXXXXGXXXXFFXXKKKXXGGGGXXXNPPPPPK 973
G PP PPP G PPPP G G PPPPP
Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI-----------SGGPPPPPPPPG 349
Query: 974 KXXXXXPPPPPXXXXGGXXTXP 1039
PPPPP GG P
Sbjct: 350 GCPPPPPPPPPGGFKGGPPPPP 371
Score = 35.1 bits (77), Expect = 0.11
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPPXXXXGGXXNXPP 1041
PPPPP PPPPP GG PP
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 34.3 bits (75), Expect = 0.19
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 958 PPPPXKKXXXXPPPPPXXXXGGXXNXPP 1041
PPPP PPPPP GG PP
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 33.5 bits (73), Expect = 0.33
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPPXXXXGGXXNXPP 1041
PPPPP PPPPP G PP
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 32.3 bits (70), Expect = 0.77
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPPXXXXGGXXNXPP 1041
PPPPP PPPPP G PP
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 934 GGXXXXKPPPPPXKKXXXXPPPPP 1005
GG PPPPP PPPPP
Sbjct: 349 GGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 30.7 bits (66), Expect = 2.3
Identities = 23/78 (29%), Positives = 24/78 (30%), Gaps = 5/78 (6%)
Frame = +3
Query: 858 GGXPPPXXXXXGXGXXFFXXKKXXGGGXXXXXTPPPPXKKXXXXX-----PPPPPXXXGG 1022
GG PPP G GG PPPP PPPPP G
Sbjct: 294 GGPPPPPGLPPITGGP--PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC 351
Query: 1023 XXXPXPXXXXKXRGGXXP 1076
P P +GG P
Sbjct: 352 PPPPPPPPPGGFKGGPPP 369
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPPXXXXGGXXNXPP 1041
PPPP PPPP GG PP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 39.1 bits (87), Expect = 0.007
Identities = 27/105 (25%), Positives = 29/105 (27%)
Frame = +1
Query: 952 KPPPPPXKKXXXXPPPPPXXXXGGXXNXPPXXXKKXGGXXNXXGVFFFFXXGRPXKXXKN 1131
+PPPPP PPPPP G P G+ G P
Sbjct: 286 RPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGM-----GGMPPPPPPG 340
Query: 1132 XXXXXGGXXPPXXXXXXXXGGXXXPXXXXPPPXXXXGXGGGXPPP 1266
G PP G P PP G G PPP
Sbjct: 341 MRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
Score = 35.1 bits (77), Expect = 0.11
Identities = 29/104 (27%), Positives = 32/104 (30%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPPXXXXGGXXNXPPXXXKKXGGXXNXXGVFFFFXXGRPXKXXKNX 1134
PP PP PPPPP G PP + G G+ P +
Sbjct: 275 PPMPPTPGMTPRPPPPP--SSGMWPPPPPPPPGRTPGPPGMPGM------PPPPPPSRFG 326
Query: 1135 XXXXGGXXPPXXXXXXXXGGXXXPXXXXPPPXXXXGXGGGXPPP 1266
GG PP GG P PPP G PPP
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPP----PPPRYPSAGPGMYPPP 366
Score = 34.7 bits (76), Expect = 0.14
Identities = 28/112 (25%), Positives = 32/112 (28%)
Frame = +2
Query: 749 PLXGXXGXKKXXXAXGXPPXFXXPPPXKKKNXFFXXGGXPPPPXXXXGXXXXFFXXKKKX 928
P G + G P PPP + G PPPP G
Sbjct: 279 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP---------- 328
Query: 929 XGGGGXXXNPPPPPKKXXXXXPPPPPXXXXGGXXTXPXKXXKXPGGXXTXXG 1084
G GG PPP + PPPPP G P P + G
Sbjct: 329 -GMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHG 379
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 39.1 bits (87), Expect = 0.007
Identities = 27/105 (25%), Positives = 29/105 (27%)
Frame = +1
Query: 952 KPPPPPXKKXXXXPPPPPXXXXGGXXNXPPXXXKKXGGXXNXXGVFFFFXXGRPXKXXKN 1131
+PPPPP PPPPP G P G+ G P
Sbjct: 296 RPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGM-----GGMPPPPPPG 350
Query: 1132 XXXXXGGXXPPXXXXXXXXGGXXXPXXXXPPPXXXXGXGGGXPPP 1266
G PP G P PP G G PPP
Sbjct: 351 MRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
Score = 35.1 bits (77), Expect = 0.11
Identities = 29/104 (27%), Positives = 32/104 (30%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPPXXXXGGXXNXPPXXXKKXGGXXNXXGVFFFFXXGRPXKXXKNX 1134
PP PP PPPPP G PP + G G+ P +
Sbjct: 285 PPMPPTPGMTPRPPPPP--SSGMWPPPPPPPPGRTPGPPGMPGM------PPPPPPSRFG 336
Query: 1135 XXXXGGXXPPXXXXXXXXGGXXXPXXXXPPPXXXXGXGGGXPPP 1266
GG PP GG P PPP G PPP
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPP----PPPRYPSAGPGMYPPP 376
Score = 34.7 bits (76), Expect = 0.14
Identities = 28/112 (25%), Positives = 32/112 (28%)
Frame = +2
Query: 749 PLXGXXGXKKXXXAXGXPPXFXXPPPXKKKNXFFXXGGXPPPPXXXXGXXXXFFXXKKKX 928
P G + G P PPP + G PPPP G
Sbjct: 289 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP---------- 338
Query: 929 XGGGGXXXNPPPPPKKXXXXXPPPPPXXXXGGXXTXPXKXXKXPGGXXTXXG 1084
G GG PPP + PPPPP G P P + G
Sbjct: 339 -GMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHG 389
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 37.9 bits (84), Expect = 0.015
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +2
Query: 794 GXPPXFXXPPPXKKKNXFFXXGGXPPPPXXXXGXXXXFFXXKKKXXGGGGXXXNPPPPPK 973
G P PPP + ++ G PPPP G + +++ PPPP +
Sbjct: 672 GPPGGGQGPPPPPQGQQYY---GGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQ 728
Query: 974 KXXXXXPPPP 1003
+ PPPP
Sbjct: 729 QRGYGYPPPP 738
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2
Query: 932 GGGGXXXNPPPPPKKXXXXXPPPPPXXXXGGXXTXPXKXXKXP 1060
G G PPPPP+ PPPP G P + + P
Sbjct: 672 GPPGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPP 714
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like protein
protein.
Length = 789
Score = 37.9 bits (84), Expect = 0.015
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +2
Query: 794 GXPPXFXXPPPXKKKNXFFXXGGXPPPPXXXXGXXXXFFXXKKKXXGGGGXXXNPPPPPK 973
G P PPP + ++ G PPPP G + +++ PPPP +
Sbjct: 672 GPPGGGQGPPPPPQGQQYY---GGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQ 728
Query: 974 KXXXXXPPPP 1003
+ PPPP
Sbjct: 729 QRGYGYPPPP 738
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2
Query: 932 GGGGXXXNPPPPPKKXXXXXPPPPPXXXXGGXXTXPXKXXKXP 1060
G G PPPPP+ PPPP G P + + P
Sbjct: 672 GPPGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPP 714
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 36.3 bits (80), Expect = 0.047
Identities = 23/73 (31%), Positives = 26/73 (35%), Gaps = 3/73 (4%)
Frame = +2
Query: 794 GXPPXFXXPPPXKKKNXFFXXGGX---PPPPXXXXGXXXXFFXXKKKXXGGGGXXXNPPP 964
G PP PPP + G PPPP G + + G G PP
Sbjct: 104 GTPP----PPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPP 159
Query: 965 PPKKXXXXXPPPP 1003
PP K PPPP
Sbjct: 160 PPPKGTGSPPPPP 172
Score = 35.5 bits (78), Expect = 0.082
Identities = 23/73 (31%), Positives = 26/73 (35%), Gaps = 3/73 (4%)
Frame = +2
Query: 794 GXPPXFXXPPPXKKKNXFFXXG---GXPPPPXXXXGXXXXFFXXKKKXXGGGGXXXNPPP 964
G PP PPP + G PPPP G + + G G PP
Sbjct: 197 GTPP----PPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLSGEGNASRRPP 252
Query: 965 PPKKXXXXXPPPP 1003
PP K PPPP
Sbjct: 253 PPPKGTGSPPPPP 265
Score = 34.7 bits (76), Expect = 0.14
Identities = 23/74 (31%), Positives = 26/74 (35%), Gaps = 4/74 (5%)
Frame = +2
Query: 794 GXPPXFXXPPPXKKKNXFFXXGGX----PPPPXXXXGXXXXFFXXKKKXXGGGGXXXNPP 961
G PP PPP + G PPPP G + + G G P
Sbjct: 72 GTPP----PPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRP 127
Query: 962 PPPKKXXXXXPPPP 1003
PPP K PPPP
Sbjct: 128 PPPPKGTGSPPPPP 141
Score = 34.3 bits (75), Expect = 0.19
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +2
Query: 866 PPPPXXXXGXXXXFFXXKKKXXGGGGXXXNPPPPPKKXXXXXPPPP 1003
PPPP G + + G G PPPP K PPPP
Sbjct: 33 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPP 78
Score = 32.7 bits (71), Expect = 0.58
Identities = 19/64 (29%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Frame = +2
Query: 818 PPPXKKKNXFFXXGGX---PPPPXXXXGXXXXFFXXKKKXXGGGGXXXNPPPPPKKXXXX 988
PPP + G PPPP G + + G G PPPP K
Sbjct: 232 PPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGT 291
Query: 989 XPPP 1000
PPP
Sbjct: 292 PPPP 295
Score = 31.9 bits (69), Expect = 1.0
Identities = 23/75 (30%), Positives = 25/75 (33%), Gaps = 4/75 (5%)
Frame = +2
Query: 794 GXPPXFXXPPPXKKKNXFFXXGGX----PPPPXXXXGXXXXFFXXKKKXXGGGGXXXNPP 961
G PP PPP + G PPPP + G PP
Sbjct: 135 GSPP----PPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPP 190
Query: 962 PPPKKXXXXXPPPPP 1006
PPPK PPPPP
Sbjct: 191 PPPK--GTGTPPPPP 203
Score = 30.7 bits (66), Expect = 2.3
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 931 GGGXXXXKPPPPPXKKXXXXPPPPP 1005
G G +PPPPP K PPPPP
Sbjct: 56 GEGNASRRPPPPP--KGTGTPPPPP 78
Score = 30.7 bits (66), Expect = 2.3
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 931 GGGXXXXKPPPPPXKKXXXXPPPPP 1005
G G +PPPPP K PPPPP
Sbjct: 119 GEGNASRRPPPPP--KGTGSPPPPP 141
Score = 30.7 bits (66), Expect = 2.3
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 931 GGGXXXXKPPPPPXKKXXXXPPPPP 1005
G G +PPPPP K PPPPP
Sbjct: 243 GEGNASRRPPPPP--KGTGSPPPPP 265
Score = 29.1 bits (62), Expect = 7.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 937 GXXXXKPPPPPXKKXXXXPPPPP 1005
G +PPPPP K PPPPP
Sbjct: 90 GNASRRPPPPP--KGTGTPPPPP 110
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.3 bits (75), Expect = 0.19
Identities = 26/103 (25%), Positives = 29/103 (28%), Gaps = 2/103 (1%)
Frame = +2
Query: 758 GXXGXKKXXXAXGXPPXFXXPPPXKKKNXFFXXGGXPPPPXXXXGXXXXFFXXKKKXXGG 937
G G ++ A PP PPP K G PPPP G
Sbjct: 224 GFRGKRQAPPAGSPPP----PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS 279
Query: 938 GGXXX--NPPPPPKKXXXXXPPPPPXXXXGGXXTXPXKXXKXP 1060
PPPP+ PPPP G P P
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 322
Score = 30.7 bits (66), Expect = 2.3
Identities = 19/71 (26%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Frame = +2
Query: 800 PPXFXXPPPXKKKNXFFXXGGXPPPPXXXXGXXXXFFXXKKKXXGGG--GXXXNPPPPPK 973
PP PPP + G PPPP G + G +PPPPP+
Sbjct: 275 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 334
Query: 974 KXXXXXPPPPP 1006
+ PP
Sbjct: 335 QKRQAPERSPP 345
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.19
Identities = 26/103 (25%), Positives = 29/103 (28%), Gaps = 2/103 (1%)
Frame = +2
Query: 758 GXXGXKKXXXAXGXPPXFXXPPPXKKKNXFFXXGGXPPPPXXXXGXXXXFFXXKKKXXGG 937
G G ++ A PP PPP K G PPPP G
Sbjct: 245 GFRGKRQAPPAGSPPP----PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS 300
Query: 938 GGXXX--NPPPPPKKXXXXXPPPPPXXXXGGXXTXPXKXXKXP 1060
PPPP+ PPPP G P P
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 343
Score = 30.7 bits (66), Expect = 2.3
Identities = 19/71 (26%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Frame = +2
Query: 800 PPXFXXPPPXKKKNXFFXXGGXPPPPXXXXGXXXXFFXXKKKXXGGG--GXXXNPPPPPK 973
PP PPP + G PPPP G + G +PPPPP+
Sbjct: 296 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 355
Query: 974 KXXXXXPPPPP 1006
+ PP
Sbjct: 356 QKRQAPERSPP 366
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.19
Identities = 26/103 (25%), Positives = 29/103 (28%), Gaps = 2/103 (1%)
Frame = +2
Query: 758 GXXGXKKXXXAXGXPPXFXXPPPXKKKNXFFXXGGXPPPPXXXXGXXXXFFXXKKKXXGG 937
G G ++ A PP PPP K G PPPP G
Sbjct: 230 GFRGKRQAPPAGSPPP----PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS 285
Query: 938 GGXXX--NPPPPPKKXXXXXPPPPPXXXXGGXXTXPXKXXKXP 1060
PPPP+ PPPP G P P
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 328
Score = 30.7 bits (66), Expect = 2.3
Identities = 19/71 (26%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Frame = +2
Query: 800 PPXFXXPPPXKKKNXFFXXGGXPPPPXXXXGXXXXFFXXKKKXXGGG--GXXXNPPPPPK 973
PP PPP + G PPPP G + G +PPPPP+
Sbjct: 281 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 340
Query: 974 KXXXXXPPPPP 1006
+ PP
Sbjct: 341 QKRQAPERSPP 351
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 26.6 bits (56), Expect(2) = 0.20
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +2
Query: 743 GXPLXGXXGXKKXXXAXGXPPXFXXPPPXKKKNXFFXXGGXPPPP 877
G P+ G G + G PPP +K+ G PPPP
Sbjct: 99 GYPVPGQEGHQVPAPQHGDHEASPPPPPPPRKSR--AGGSSPPPP 141
Score = 26.2 bits (55), Expect(2) = 0.20
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 938 GGXXXNPPPPPKKXXXXXPPPPP 1006
GG PPPPP+ P PP
Sbjct: 134 GGSSPPPPPPPRVPRTPPPRSPP 156
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 33.9 bits (74), Expect = 0.25
Identities = 21/66 (31%), Positives = 21/66 (31%)
Frame = -2
Query: 420 FFXPPXXXXXKPPPPFFFXXKXXFFXXXPPPXXIXFFXXXPXXXXPPPXXXNXGGXXXPX 241
FF PP PPPP F PPP F P PPP G P
Sbjct: 295 FFPPPPRGHFPPPPPHFMGRGMPPPFMPPPP---HFGMGPPRGFMPPPHPMMFRGGPYPP 351
Query: 240 FXXXXP 223
F P
Sbjct: 352 FFPPPP 357
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -3
Query: 332 PPXXXFFXPXXPXXXFPPPXXXTXGXXXXPXFXXXPP 222
PP FF P P FPPP G P F PP
Sbjct: 290 PPPFGFFPPP-PRGHFPPPPPHFMGRGMPPPFMPPPP 325
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 33.9 bits (74), Expect = 0.25
Identities = 21/66 (31%), Positives = 21/66 (31%)
Frame = -2
Query: 420 FFXPPXXXXXKPPPPFFFXXKXXFFXXXPPPXXIXFFXXXPXXXXPPPXXXNXGGXXXPX 241
FF PP PPPP F PPP F P PPP G P
Sbjct: 295 FFPPPPRGHFPPPPPHFMGRGMPPPFMPPPP---HFGMGPPRGFMPPPHPMMFRGGPYPP 351
Query: 240 FXXXXP 223
F P
Sbjct: 352 FFPPPP 357
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -3
Query: 332 PPXXXFFXPXXPXXXFPPPXXXTXGXXXXPXFXXXPP 222
PP FF P P FPPP G P F PP
Sbjct: 290 PPPFGFFPPP-PRGHFPPPPPHFMGRGMPPPFMPPPP 325
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 31.5 bits (68), Expect = 1.3
Identities = 25/72 (34%), Positives = 25/72 (34%), Gaps = 4/72 (5%)
Frame = +2
Query: 803 PXFXXPPPXKKKNXFFXX----GGXPPPPXXXXGXXXXFFXXKKKXXGGGGXXXNPPPPP 970
P F PPP N F GG PPPP G GG PPPP
Sbjct: 61 PSFFIPPPVP--NGFIPPPPGPGGIPPPPPMFAGG----IPPPPPMMGG------IPPPP 108
Query: 971 KKXXXXXPPPPP 1006
PPPPP
Sbjct: 109 PMFGAPPPPPPP 120
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 957 PPPPXKKXXXXXPPPPPXXXGGXXXP 1034
PPPP PPPPP GG P
Sbjct: 577 PPPPPPPPMLGGPPPPPPPPGGLMGP 602
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Frame = +1
Query: 955 PPPPPXKKXXXX---PPPPPXXXXGGXXNXPP 1041
PPPPP + PPPPP GG PP
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 941 GXXXNPPPPPKKXXXXXPPPPPXXXXGGXXTXPXKXXK 1054
G PPPPP PPPPP G + K K
Sbjct: 574 GAPPPPPPPPPMLGGPPPPPPPPGGLMGPASNDAKTIK 611
Score = 30.7 bits (66), Expect = 2.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 937 GXXXXKPPPPPXKKXXXXPPPPPXXXXGGXXN 1032
G PPPPP PPPPP G N
Sbjct: 574 GAPPPPPPPPPMLGGPPPPPPPPGGLMGPASN 605
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPPXXXXGGXXNXPPXXXKK 1056
PPPPP PPPPP G + KK
Sbjct: 579 PPPPPPMLGGPPPPPPPPGGLMGPASNDAKTIKK 612
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 957 PPPPXKKXXXXXPPPPPXXXGGXXXPXP 1040
PPPP K+ PPPPP P P
Sbjct: 298 PPPPIKEESPPPPPPPPVASVSNLAPVP 325
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 957 PPPPXKKXXXXXPPPPPXXXGGXXXPXP 1040
PPPP K+ PPPPP P P
Sbjct: 298 PPPPIKEESPPPPPPPPVASVSNLAPVP 325
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 931 GGGXXXXKPPPPPXKKXXXXPPPPPXXXXGGXXNXPPXXXKKXGG 1065
G G PPPP PPP GG PP + GG
Sbjct: 763 GAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGG 807
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical protein
C15C6.3 protein.
Length = 541
Score = 30.7 bits (66), Expect = 2.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPP 1005
PPPPP + PPPPP
Sbjct: 480 PPPPPENEPEEFPPPPP 496
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 932 GGGGXXXNPPPPPKKXXXXXPPPPP 1006
GGGG PPPPP P P P
Sbjct: 33 GGGGGDAAPPPPPPADAAPAPAPAP 57
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -2
Query: 1005 GGGGGXXXXFFXGGGGGFXXXPPPP 931
GGGGG GGGGG PPPP
Sbjct: 23 GGGGGGYSG--GGGGGGDAAPPPPP 45
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical protein
ZC376.8 protein.
Length = 278
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 916 KKKXXGGGXXXXKPPPPPXKKXXXXPP--PPP 1005
KKK G PPPPP PP PPP
Sbjct: 39 KKKDVSGAPSAESPPPPPPAPKVPEPPKAPPP 70
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 30.3 bits (65), Expect = 3.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 932 GGGGXXXNPPPPPKKXXXXXPPPPP 1006
GGG P PPP PPPPP
Sbjct: 654 GGGSSMPMPVPPPGGLGGFMPPPPP 678
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 30.3 bits (65), Expect = 3.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 932 GGGGXXXNPPPPPKKXXXXXPPPPP 1006
GGG P PPP PPPPP
Sbjct: 654 GGGSSMPMPVPPPGGLGGFMPPPPP 678
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical protein
F53F1.5 protein.
Length = 215
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 932 GGGGXXXNPPPPPKKXXXXXPPPPP 1006
GGGG PPPPP P PP
Sbjct: 23 GGGGCGCAPPPPPPPCGCGAPALPP 47
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical protein
F53F1.4 protein.
Length = 105
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 932 GGGGXXXNPPPPPKKXXXXXPPPPP 1006
GGGG PPPPP P PP
Sbjct: 23 GGGGCGCAPPPPPPPCGCGGPSLPP 47
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 protein.
Length = 231
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 932 GGGGXXXNPPPPPKKXXXXXPPPPP 1006
GGGG PPPPP P PP
Sbjct: 23 GGGGCGCAPPPPPPPCGCGAPALPP 47
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.9 bits (64), Expect = 4.1
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +2
Query: 956 PPPPPKKXXXXXPPPPPXXXXGGXXTXPXKXXKXP 1060
PPPPP PPPPP G T P K K P
Sbjct: 86 PPPPPPPPTLKAPPPPPIL---GLKT-PSKSLKTP 116
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 932 GGGGXXXNPPPPPKKXXXXXPPPPP 1006
GGGG PPPPP PPP
Sbjct: 23 GGGGCGCAPPPPPACGCGGGAAPPP 47
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 4.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 956 PPPPPKKXXXXXPPPPP 1006
PPPPP PPPPP
Sbjct: 1344 PPPPPSDDLTPVPPPPP 1360
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 1004 GGGGGXXXXFFXGGGGGXSXXXPPP 930
GGGGG GG GG S PPP
Sbjct: 190 GGGGGMGGGGGSGGSGGGSGRFPPP 214
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical protein
ZC168.5 protein.
Length = 172
Score = 29.5 bits (63), Expect = 5.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPPXXXXGG 1023
PPPPP PPPPP G
Sbjct: 42 PPPPPCGGGYEAPPPPPPPSYAG 64
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical protein
R102.6 protein.
Length = 324
Score = 29.5 bits (63), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPP 1005
PPPPP PPPPP
Sbjct: 253 PPPPPCPMPIPCPPPPP 269
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPP 1005
PPPPP PPPPP
Sbjct: 63 PPPPPPPPPPMCPPPPP 79
Score = 29.5 bits (63), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 955 PPPPPXKKXXXXPPPPP 1005
PPPPP PPPPP
Sbjct: 64 PPPPPPPPPMCPPPPPP 80
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical protein
F41F3.3 protein.
Length = 156
Score = 25.4 bits (53), Expect(2) = 7.0
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = -3
Query: 1253 PPPXPXXXXGGGXFXXGXXXPPXXXXXXXXGGXXPP 1146
PPP P GGG P GG PP
Sbjct: 34 PPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPP 69
Score = 22.2 bits (45), Expect(2) = 7.0
Identities = 13/36 (36%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = -3
Query: 1040 GGXXXXPPXXXXGGG-GGXXXXFFXGGGGGXSXXXP 936
GG PP GGG GG GGG + P
Sbjct: 63 GGGCCPPPAPACGGGCGGGVAPAPIGGGYAQAPQAP 98
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical protein
F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 941 GXXXNPPPPPKKXXXXXPPPPP 1006
G PPPPP PPPPP
Sbjct: 534 GAPTPPPPPPVGMANGGPPPPP 555
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 29.1 bits (62), Expect = 7.2
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 1006 GGGGGXXXXXFFXGGGGVXXXXXPPP 929
GGGGG + GG GV PPP
Sbjct: 18 GGGGGGGGEAGYSGGAGVEAPPPPPP 43
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical protein
C33B4.3b protein.
Length = 993
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 956 PPPPPKKXXXXXPPPPPXXXXGG 1024
PPPP PPPPP GG
Sbjct: 796 PPPPLPPISSGAPPPPPPPPPGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein
C33B4.3a protein.
Length = 1110
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 956 PPPPPKKXXXXXPPPPPXXXXGG 1024
PPPP PPPPP GG
Sbjct: 796 PPPPLPPISSGAPPPPPPPPPGG 818
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 1019 PXXXXGGGGGXXXXFFXGGGGGXSXXXPPP 930
P GGGGG GG GG PPP
Sbjct: 23 PSAGGGGGGGGCGGGCGGGCGGGGGCAPPP 52
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 1019 PXXXXGGGGGXXXXFFXGGGGGXSXXXPPP 930
P GGGGG GG GG PPP
Sbjct: 23 PSAGGGGGGGGCGGGCGGGCGGGGGCAPPP 52
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.7 bits (61), Expect = 9.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 956 PPPPPKKXXXXXPPPPP 1006
PPPPP PPPPP
Sbjct: 41 PPPPPMCGCAPPPPPPP 57
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 1005 GGGGGXXXXFFXGGGGGFXXXPPPP 931
GGGGG GGGGG P PP
Sbjct: 622 GGGGGPPRGPGGGGGGGPTGPPAPP 646
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisomerase
III protein.
Length = 759
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 1005 GGGGGXXXXFFXGGGGGFXXXPPPP 931
GGGGG GGGGG P PP
Sbjct: 622 GGGGGPPRGPGGGGGGGPTGPPAPP 646
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 906 FFXXKKXXGGGXXXXXTPPPPXKKXXXXXPPPPPXXXGGXXXP 1034
F GGG PPPP PPP P GG P
Sbjct: 17 FLFPSAGGGGGGCGCGAPPPP----PACAPPPAPACGGGAPPP 55
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 920 KKXXGGGGXXXNPPPPPKKXXXXXPPPP 1003
K G GG PPPPP PPP
Sbjct: 1004 KAPAGPGGPPPPPPPPPADFFANIAPPP 1031
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform b protein.
Length = 495
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 920 KKXXGGGGXXXNPPPPPKKXXXXXPPPP 1003
K G GG PPPPP PPP
Sbjct: 243 KAPAGPGGPPPPPPPPPADFFANIAPPP 270
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.156 0.531
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,924,594
Number of Sequences: 27780
Number of extensions: 482538
Number of successful extensions: 3848
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1784
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3611117266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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