Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_B22
(1319 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 36 0.064
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 36 0.064
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.26
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.26
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.26
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 32 0.79
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 1.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 1.0
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 2.4
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 2.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 3.2
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 30 3.2
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 30 3.2
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 5.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 7.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 7.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 7.3
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 9.7
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 9.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 9.7
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 35.9 bits (79), Expect = 0.064
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -2
Query: 1012 PXPPPXXXXXXXXXXXXRXXPPKXXPPXPXXXXXXXXXXNPPPPPPXP 869
P PPP PP PP P PPPPPP P
Sbjct: 610 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/62 (25%), Positives = 17/62 (27%)
Frame = -2
Query: 1060 PXFXXXPXXPXXXXXXPXPPPXXXXXXXXXXXXRXXPPKXXPPXPXXXXXXXXXXNPPPP 881
P + P P PPP PP PP PPPP
Sbjct: 596 PNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 655
Query: 880 PP 875
PP
Sbjct: 656 PP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 35.9 bits (79), Expect = 0.064
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -2
Query: 1012 PXPPPXXXXXXXXXXXXRXXPPKXXPPXPXXXXXXXXXXNPPPPPPXP 869
P PPP PP PP P PPPPPP P
Sbjct: 436 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/62 (25%), Positives = 17/62 (27%)
Frame = -2
Query: 1060 PXFXXXPXXPXXXXXXPXPPPXXXXXXXXXXXXRXXPPKXXPPXPXXXXXXXXXXNPPPP 881
P + P P PPP PP PP PPPP
Sbjct: 422 PNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 481
Query: 880 PP 875
PP
Sbjct: 482 PP 483
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.26
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -2
Query: 1033 PXXXXXXPXPPPXXXXXXXXXXXXRXXPPKXXPPXPXXXXXXXXXXNPPPPPP 875
P P PPP PP PP P PPPPPP
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.26
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -2
Query: 1033 PXXXXXXPXPPPXXXXXXXXXXXXRXXPPKXXPPXPXXXXXXXXXXNPPPPPP 875
P P PPP PP PP P PPPPPP
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.26
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -2
Query: 1033 PXXXXXXPXPPPXXXXXXXXXXXXRXXPPKXXPPXPXXXXXXXXXXNPPPPPP 875
P P PPP PP PP P PPPPPP
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical protein
F15B9.4 protein.
Length = 1140
Score = 32.3 bits (70), Expect = 0.79
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -2
Query: 1042 PXXPXXXXXXPXPPPXXXXXXXXXXXXRXXPPKXXPPXPXXXXXXXXXXNPPPPPP 875
P P P PPP PP PP P PPPPPP
Sbjct: 491 PPMPSINGHAPNPPPPPPLLGIAPMSTNAPPP---PPMPGMAPLSTGAPTPPPPPP 543
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = -2
Query: 1060 PXFXXXPXXPXXXXXXPXPPPXXXXXXXXXXXXRXXPPKXXPPXPXXXXXXXXXXNPPPP 881
P P P P PPP PP PP P PPPP
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP---PPPPSRFGPPGMGGMPPPP 337
Query: 880 PP 875
PP
Sbjct: 338 PP 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = -2
Query: 1060 PXFXXXPXXPXXXXXXPXPPPXXXXXXXXXXXXRXXPPKXXPPXPXXXXXXXXXXNPPPP 881
P P P P PPP PP PP P PPPP
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP---PPPPSRFGPPGMGGMPPPP 347
Query: 880 PP 875
PP
Sbjct: 348 PP 349
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical protein
C33B4.3b protein.
Length = 993
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 2/50 (4%)
Frame = -2
Query: 1012 PXPPPXXXXXXXXXXXXRXXPPKXX--PPXPXXXXXXXXXXNPPPPPPXP 869
P PPP PP PP P PPPPPP P
Sbjct: 767 PPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein
C33B4.3a protein.
Length = 1110
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 2/50 (4%)
Frame = -2
Query: 1012 PXPPPXXXXXXXXXXXXRXXPPKXX--PPXPXXXXXXXXXXNPPPPPPXP 869
P PPP PP PP P PPPPPP P
Sbjct: 767 PPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPP 816
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = +3
Query: 858 FXXXGXGGGGGGFXXXXXXXXXXGXGGXXFGGXFRXXXXXXXXXXXXGGGXGXXXXXXGX 1037
F G GGGGGG G GG GG GGG G G
Sbjct: 20 FPSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGC 79
Query: 1038 XGXXXXXG 1061
G G
Sbjct: 80 GGGGGCGG 87
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical protein
C31C9.6 protein.
Length = 965
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = -2
Query: 1012 PXPPPXXXXXXXXXXXXRXXPPKXXPPXPXXXXXXXXXXNPPPPPPXP 869
P PPP K PP P PPPPPP P
Sbjct: 465 PAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 512
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = -2
Query: 1012 PXPPPXXXXXXXXXXXXRXXPPKXXPPXPXXXXXXXXXXNPPPPPPXP 869
P PPP K PP P PPPPPP P
Sbjct: 472 PAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 519
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -2
Query: 1012 PXPPPXXXXXXXXXXXXRXXPPKXXPPXPXXXXXXXXXXNPPPPPPXP 869
P PPP PP+ PP P PPPPPP P
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPP-------PPPPPPPP 72
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 30.3 bits (65), Expect = 3.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 466 TNPRAQRSKVRRYSITSAGPPFRKTGKSL 380
+ PRAQ+SK RR + S PP ++ SL
Sbjct: 811 STPRAQKSKSRRDDVESEAPPVKRATPSL 839
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 30.3 bits (65), Expect = 3.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 466 TNPRAQRSKVRRYSITSAGPPFRKTGKSL 380
+ PRAQ+SK RR + S PP ++ SL
Sbjct: 811 STPRAQKSKSRRDDVESEAPPVKRATPSL 839
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/66 (30%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = +3
Query: 870 GXGGGGGGFXXXXXXXXXXGXG--GXXFGGXFRXXXXXXXXXXXXGGGXGXXXXXXGXXG 1043
G GGG GGF G G G GG F GGG G G G
Sbjct: 65 GFGGGNGGFGGGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGGGGGQRQGGGGGG 124
Query: 1044 XXXXXG 1061
G
Sbjct: 125 FGDILG 130
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/56 (28%), Positives = 16/56 (28%), Gaps = 1/56 (1%)
Frame = -2
Query: 1033 PXXXXXXPXPPPXXXXXXXXXXXXRXXPPKXXPPXPXXXXXXXXXX-NPPPPPPXP 869
P P PPP PP PP P PPPPP P
Sbjct: 248 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/56 (28%), Positives = 16/56 (28%), Gaps = 1/56 (1%)
Frame = -2
Query: 1033 PXXXXXXPXPPPXXXXXXXXXXXXRXXPPKXXPPXPXXXXXXXXXX-NPPPPPPXP 869
P P PPP PP PP P PPPPP P
Sbjct: 269 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/56 (28%), Positives = 16/56 (28%), Gaps = 1/56 (1%)
Frame = -2
Query: 1033 PXXXXXXPXPPPXXXXXXXXXXXXRXXPPKXXPPXPXXXXXXXXXX-NPPPPPPXP 869
P P PPP PP PP P PPPPP P
Sbjct: 254 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 858 FXXXGXGGGGGGFXXXXXXXXXXGXGGXXFGGXFRXXXXXXXXXXXXGGGXG 1013
F G GGGGGG G GG GG GGG G
Sbjct: 51 FGGGGGGGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGG 102
Score = 28.7 bits (61), Expect = 9.7
Identities = 19/67 (28%), Positives = 20/67 (29%), Gaps = 3/67 (4%)
Frame = +3
Query: 870 GXGGGGGGFXXXXXXXXXXGXGGXXF---GGXFRXXXXXXXXXXXXGGGXGXXXXXXGXX 1040
G GGGGG + G GG F GG GGG G G
Sbjct: 98 GGGGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGGGGGQRQGGGGGGFGDILGGI 157
Query: 1041 GXXXXXG 1061
G G
Sbjct: 158 GSLIGGG 164
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 9.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 952 PPKXXPPXPXXXXXXXXXXNPPPPPP 875
PP PP P PPPPPP
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPP 92
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 9.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 952 PPKXXPPXPXXXXXXXXXXNPPPPPP 875
PP PP P PPPPPP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPP 1363
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,612,345
Number of Sequences: 27780
Number of extensions: 366254
Number of successful extensions: 2472
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1879
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3694370690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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