Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_B22
         (1319 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    29   0.12 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    29   0.12 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    29   0.12 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   4.5  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   5.9  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 0.12
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 430 YSITSAGPPFRKTGKSLSLWKSS 362
           Y +T  GPP  +TG +L +W+++
Sbjct: 15  YDMTGCGPPEEETGSNLPVWEAA 37


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 0.12
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 430 YSITSAGPPFRKTGKSLSLWKSS 362
           Y +T  GPP  +TG +L +W+++
Sbjct: 15  YDMTGCGPPEEETGSNLPVWEAA 37


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 0.12
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 430 YSITSAGPPFRKTGKSLSLWKSS 362
           Y +T  GPP  +TG +L +W+++
Sbjct: 15  YDMTGCGPPEEETGSNLPVWEAA 37


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 892  PPPPPPXP 869
            PPPPPP P
Sbjct: 1355 PPPPPPPP 1362


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 902 PXKPSPPPP 876
           P KP+PPPP
Sbjct: 338 PPKPAPPPP 346


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,376
Number of Sequences: 438
Number of extensions: 5253
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 45503877
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)