Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_B20
(1298 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein. 175 2e-43
BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein comple... 175 2e-43
BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein comple... 175 2e-43
BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein comple... 175 2e-43
AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein pro... 175 2e-43
AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein. 175 2e-43
AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of coat... 175 3e-43
AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein. 175 4e-43
AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein. 175 4e-43
AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein. 72 4e-12
>CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein.
Length = 308
Score = 175 bits (427), Expect = 2e-43
Identities = 89/237 (37%), Positives = 139/237 (58%), Gaps = 1/237 (0%)
Frame = +3
Query: 195 LPRGNYRIVQQELKTAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFL 371
L + + +V E+K + P LQ ++ DYL ++ + +IVA++D +++ +++N FL
Sbjct: 61 LAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFL 120
Query: 372 IVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGT 551
++AA+IY H+ N +AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D T
Sbjct: 121 LMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDAT 180
Query: 552 LTQLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQL 731
LTQLA AW++L GG +QDA+Y E+++ WE AE L
Sbjct: 181 LTQLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLL 239
Query: 732 TDAASRAPQXXXXXXXXXXXXXXXXKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDE 902
+A + KPPEV+ RYL+QL D+H HPF+KEY+AK ++
Sbjct: 240 QEALDKDSGYPETLVNLIVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKEND 296
Score = 72.1 bits (169), Expect = 4e-12
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = +2
Query: 35 PLARHQQDVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAXLYRSYIAQ 202
P + +VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD LYR+Y+AQ
Sbjct: 8 PASGGSGEVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQ 63
>BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 175 bits (427), Expect = 2e-43
Identities = 89/237 (37%), Positives = 139/237 (58%), Gaps = 1/237 (0%)
Frame = +3
Query: 195 LPRGNYRIVQQELKTAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFL 371
L + + +V E+K + P LQ ++ DYL ++ + +IVA++D +++ +++N FL
Sbjct: 61 LAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFL 120
Query: 372 IVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGT 551
++AA+IY H+ N +AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D T
Sbjct: 121 LMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDAT 180
Query: 552 LTQLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQL 731
LTQLA AW++L GG +QDA+Y E+++ WE AE L
Sbjct: 181 LTQLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLL 239
Query: 732 TDAASRAPQXXXXXXXXXXXXXXXXKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDE 902
+A + KPPEV+ RYL+QL D+H HPF+KEY+AK ++
Sbjct: 240 QEALDKDSGYPETLVNLIVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKEND 296
Score = 72.1 bits (169), Expect = 4e-12
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = +2
Query: 35 PLARHQQDVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAXLYRSYIAQ 202
P + +VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD LYR+Y+AQ
Sbjct: 8 PASGGSGEVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQ 63
>BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 175 bits (427), Expect = 2e-43
Identities = 89/237 (37%), Positives = 139/237 (58%), Gaps = 1/237 (0%)
Frame = +3
Query: 195 LPRGNYRIVQQELKTAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFL 371
L + + +V E+K + P LQ ++ DYL ++ + +IVA++D +++ +++N FL
Sbjct: 61 LAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFL 120
Query: 372 IVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGT 551
++AA+IY H+ N +AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D T
Sbjct: 121 LMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDAT 180
Query: 552 LTQLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQL 731
LTQLA AW++L GG +QDA+Y E+++ WE AE L
Sbjct: 181 LTQLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLL 239
Query: 732 TDAASRAPQXXXXXXXXXXXXXXXXKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDE 902
+A + KPPEV+ RYL+QL D+H HPF+KEY+AK ++
Sbjct: 240 QEALDKDSGYPETLVNLIVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKEND 296
Score = 72.1 bits (169), Expect = 4e-12
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = +2
Query: 35 PLARHQQDVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAXLYRSYIAQ 202
P + +VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD LYR+Y+AQ
Sbjct: 8 PASGGSGEVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQ 63
>BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 175 bits (427), Expect = 2e-43
Identities = 89/237 (37%), Positives = 139/237 (58%), Gaps = 1/237 (0%)
Frame = +3
Query: 195 LPRGNYRIVQQELKTAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFL 371
L + + +V E+K + P LQ ++ DYL ++ + +IVA++D +++ +++N FL
Sbjct: 61 LAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFL 120
Query: 372 IVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGT 551
++AA+IY H+ N +AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D T
Sbjct: 121 LMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDAT 180
Query: 552 LTQLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQL 731
LTQLA AW++L GG +QDA+Y E+++ WE AE L
Sbjct: 181 LTQLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLL 239
Query: 732 TDAASRAPQXXXXXXXXXXXXXXXXKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDE 902
+A + KPPEV+ RYL+QL D+H HPF+KEY+AK ++
Sbjct: 240 QEALDKDSGYPETLVNLIVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKEND 296
Score = 72.1 bits (169), Expect = 4e-12
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = +2
Query: 35 PLARHQQDVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAXLYRSYIAQ 202
P + +VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD LYR+Y+AQ
Sbjct: 8 PASGGSGEVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQ 63
>AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein
protein.
Length = 308
Score = 175 bits (427), Expect = 2e-43
Identities = 89/237 (37%), Positives = 139/237 (58%), Gaps = 1/237 (0%)
Frame = +3
Query: 195 LPRGNYRIVQQELKTAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFL 371
L + + +V E+K + P LQ ++ DYL ++ + +IVA++D +++ +++N FL
Sbjct: 61 LAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFL 120
Query: 372 IVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGT 551
++AA+IY H+ N +AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D T
Sbjct: 121 LMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDAT 180
Query: 552 LTQLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQL 731
LTQLA AW++L GG +QDA+Y E+++ WE AE L
Sbjct: 181 LTQLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLL 239
Query: 732 TDAASRAPQXXXXXXXXXXXXXXXXKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDE 902
+A + KPPEV+ RYL+QL D+H HPF+KEY+AK ++
Sbjct: 240 QEALDKDSGYPETLVNLIVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKEND 296
Score = 72.1 bits (169), Expect = 4e-12
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = +2
Query: 35 PLARHQQDVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAXLYRSYIAQ 202
P + +VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD LYR+Y+AQ
Sbjct: 8 PASGGSGEVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQ 63
>AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein.
Length = 307
Score = 175 bits (427), Expect = 2e-43
Identities = 89/237 (37%), Positives = 139/237 (58%), Gaps = 1/237 (0%)
Frame = +3
Query: 195 LPRGNYRIVQQELKTAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFL 371
L + + +V E+K + P LQ ++ DYL ++ + +IVA++D +++ +++N FL
Sbjct: 60 LAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFL 119
Query: 372 IVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGT 551
++AA+IY H+ N +AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D T
Sbjct: 120 LMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDAT 179
Query: 552 LTQLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQL 731
LTQLA AW++L GG +QDA+Y E+++ WE AE L
Sbjct: 180 LTQLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHIAQGRWEAAEGLL 238
Query: 732 TDAASRAPQXXXXXXXXXXXXXXXXKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDE 902
+A + KPPEV+ RYL+QL D+H HPF+KEY+AK ++
Sbjct: 239 QEALDKDSGYPETLVNLIVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKEND 295
Score = 70.5 bits (165), Expect = 1e-11
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = +2
Query: 44 RHQQDVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAXLYRSYIAQ 202
R +VDELFDVKNAFY+G+YQQ INEA V S+P ++RD LYR+Y+AQ
Sbjct: 10 RGSGEVDELFDVKNAFYIGSYQQCINEAHGVKLSSPERDVERDVFLYRAYLAQ 62
>AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of
coatomer protein complex isoform a variant protein.
Length = 308
Score = 175 bits (426), Expect = 3e-43
Identities = 89/237 (37%), Positives = 139/237 (58%), Gaps = 1/237 (0%)
Frame = +3
Query: 195 LPRGNYRIVQQELKTAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFL 371
L + + +V E+K + P LQ ++ DYL ++ + +IVA++D +++ +++N FL
Sbjct: 61 LAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFL 120
Query: 372 IVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGT 551
++AA+IY H+ N +AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D T
Sbjct: 121 LMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDAT 180
Query: 552 LTQLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQL 731
LTQLA AW++L GG +QDA+Y E+++ WE AE L
Sbjct: 181 LTQLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLL 239
Query: 732 TDAASRAPQXXXXXXXXXXXXXXXXKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDE 902
+A + KPPEV+ RYL+QL D+H HPF+KEY+AK ++
Sbjct: 240 QEALDKDSCYPETLVNLIVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKEND 296
Score = 72.1 bits (169), Expect = 4e-12
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = +2
Query: 35 PLARHQQDVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAXLYRSYIAQ 202
P + +VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD LYR+Y+AQ
Sbjct: 8 PASGGSGEVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQ 63
>AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein.
Length = 308
Score = 175 bits (425), Expect = 4e-43
Identities = 89/237 (37%), Positives = 139/237 (58%), Gaps = 1/237 (0%)
Frame = +3
Query: 195 LPRGNYRIVQQELKTAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFL 371
L + + +V E+K + P LQ ++ DYL ++ + +IVA++D +++ +++N FL
Sbjct: 61 LAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNITFL 120
Query: 372 IVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGT 551
++AA+IY H+ N +AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D T
Sbjct: 121 LMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDAT 180
Query: 552 LTQLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQL 731
LTQLA AW++L GG +QDA+Y E+++ WE AE L
Sbjct: 181 LTQLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLL 239
Query: 732 TDAASRAPQXXXXXXXXXXXXXXXXKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDE 902
+A + KPPEV+ RYL+QL D+H HPF+KEY+AK ++
Sbjct: 240 QEALDKDSGYPETLVNLIVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKEND 296
Score = 72.1 bits (169), Expect = 4e-12
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = +2
Query: 35 PLARHQQDVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAXLYRSYIAQ 202
P + +VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD LYR+Y+AQ
Sbjct: 8 PASGGSGEVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQ 63
>AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein.
Length = 245
Score = 175 bits (425), Expect = 4e-43
Identities = 88/232 (37%), Positives = 137/232 (59%), Gaps = 1/232 (0%)
Frame = +3
Query: 210 YRIVQQELKTAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAAT 386
+ +V E+K + P LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+
Sbjct: 3 FGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAAS 62
Query: 387 IYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLA 566
IY H+ N +AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA
Sbjct: 63 IYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLA 122
Query: 567 QAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAAS 746
AW++L GG +QDA+Y E+++ WE AE L +A
Sbjct: 123 TAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALD 181
Query: 747 RAPQXXXXXXXXXXXXXXXXKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDE 902
+ KPPEV+ RYL+QL D+H HPF+KEY+AK ++
Sbjct: 182 KDSGYPETLVNLIVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKEND 233
>AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein.
Length = 147
Score = 72.1 bits (169), Expect = 4e-12
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = +2
Query: 35 PLARHQQDVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAXLYRSYIAQ 202
P + +VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD LYR+Y+AQ
Sbjct: 8 PASGGSGEVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQ 63
Score = 70.1 bits (164), Expect = 2e-11
Identities = 31/87 (35%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Frame = +3
Query: 195 LPRGNYRIVQQELKTAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFL 371
L + + +V E+K + P LQ ++ DYL ++ + +IVA++D +++ +++N FL
Sbjct: 61 LAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFL 120
Query: 372 IVAATIYYHEDNYEAALKILHNAESLE 452
++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 121 LMAASIYLHDQNPDAALRALHQGDSLE 147
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,932,502
Number of Sequences: 237096
Number of extensions: 3403521
Number of successful extensions: 11645
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11376
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18715718200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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