Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_B20
(1298 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145691-1|AAD38666.1| 306|Drosophila melanogaster BcDNA.LD2988... 105 2e-22
AE014134-1103|AAF52392.1| 306|Drosophila melanogaster CG9543-PA... 105 2e-22
L42511-1|AAC41607.1| 224|Drosophila melanogaster shortsighted c... 31 2.6
AF003342-1|AAB61239.1| 225|Drosophila melanogaster bunched prot... 31 2.6
AE014134-2215|AAF53200.2| 219|Drosophila melanogaster CG5461-PB... 31 2.6
>AF145691-1|AAD38666.1| 306|Drosophila melanogaster BcDNA.LD29885
protein.
Length = 306
Score = 105 bits (251), Expect = 2e-22
Identities = 70/231 (30%), Positives = 108/231 (46%), Gaps = 1/231 (0%)
Frame = +3
Query: 213 RIVQQELKTADPM-LQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATI 389
RIV ++K + LQ L+ + + + ++ + +VA G E I+ + A +
Sbjct: 59 RIVASDIKEGNSTPLQALRLVHEAFEQPSRTEELLEKLTDKVA-GEEDETNIWHLATAIV 117
Query: 390 YYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQ 569
Y H+ +E ALKILH + +LE A ++QCLL + R DLA++ + +Q+I DD TLTQLAQ
Sbjct: 118 YCHDGQFENALKILHGSTNLESMALSVQCLLRLQRVDLAKQLVAKMQEISDDATLTQLAQ 177
Query: 570 AWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAASR 749
AW+ L QG +QDA + E E +EEA+ L ++ +
Sbjct: 178 AWVALAQGTEQMQDAFHIYQEFCE-KFKPTPALLNGQAVVHLGLERYEEADSVLRESLLK 236
Query: 750 APQXXXXXXXXXXXXXXXXKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDE 902
KP E R L QL +P+ FV + K+ E
Sbjct: 237 KHNDYDTLINLMVHAHLTGKPTEAITRNLEQLRQFYPKSDFVTDLDKKSAE 287
Score = 31.5 bits (68), Expect = 2.6
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +2
Query: 38 LARHQQDVDE---LFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAXLYRSYIA 199
++R Q + D LFD +N +Y+GN+ +IN V P + + +Y SY+A
Sbjct: 1 MSRQQNEEDTNSVLFDARNEYYIGNFMGSIN---FVLPEQGTAGPELLSYMYLSYLA 54
>AE014134-1103|AAF52392.1| 306|Drosophila melanogaster CG9543-PA
protein.
Length = 306
Score = 105 bits (251), Expect = 2e-22
Identities = 70/231 (30%), Positives = 108/231 (46%), Gaps = 1/231 (0%)
Frame = +3
Query: 213 RIVQQELKTADPM-LQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATI 389
RIV ++K + LQ L+ + + + ++ + +VA G E I+ + A +
Sbjct: 59 RIVASDIKEGNSTPLQALRLVHEAFEQPSRTEELLEKLTDKVA-GEEDETNIWHLATAIV 117
Query: 390 YYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQ 569
Y H+ +E ALKILH + +LE A ++QCLL + R DLA++ + +Q+I DD TLTQLAQ
Sbjct: 118 YCHDGQFENALKILHGSTNLESMALSVQCLLRLQRVDLAKQLVAKMQEISDDATLTQLAQ 177
Query: 570 AWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAASR 749
AW+ L QG +QDA + E E +EEA+ L ++ +
Sbjct: 178 AWVALAQGTEQMQDAFHIYQEFCE-KFKPTPALLNGQAVVHLGLERYEEADSVLRESLLK 236
Query: 750 APQXXXXXXXXXXXXXXXXKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDE 902
KP E R L QL +P+ FV + K+ E
Sbjct: 237 KHNDYDTLINLMVHAHLTGKPTEAITRNLEQLRQFYPKSDFVTDLDKKSAE 287
Score = 31.5 bits (68), Expect = 2.6
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +2
Query: 38 LARHQQDVDE---LFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAXLYRSYIA 199
++R Q + D LFD +N +Y+GN+ +IN V P + + +Y SY+A
Sbjct: 1 MSRQQNEEDTNSVLFDARNEYYIGNFMGSIN---FVLPEQGTAGPELLSYMYLSYLA 54
>L42511-1|AAC41607.1| 224|Drosophila melanogaster shortsighted
class 1 protein.
Length = 224
Score = 31.5 bits (68), Expect = 2.6
Identities = 27/97 (27%), Positives = 45/97 (46%)
Frame = +3
Query: 234 KTADPMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYE 413
K DP+ + + +DY LPDA+ ++ VA ID ++ + +L +I A E E
Sbjct: 28 KQQDPVREVVMKYIDYFLPDASGTSAVA-IDNKIEQAMDLVKSHLMI--AVREEVEVLKE 84
Query: 414 AALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKL 524
+++ LEL +L N P +QL+L
Sbjct: 85 RISELMDKINKLELE----NSILKSNIPQETLQQLQL 117
>AF003342-1|AAB61239.1| 225|Drosophila melanogaster bunched
protein.
Length = 225
Score = 31.5 bits (68), Expect = 2.6
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 234 KTADPMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLI 374
K DP+ + + +DY LPDA+ ++ VA ID ++ + +L +I
Sbjct: 29 KQEDPVCEVVMKYIDYFLPDASGTSAVA-IDNKIEQAMDLVKSHLMI 74
>AE014134-2215|AAF53200.2| 219|Drosophila melanogaster CG5461-PB,
isoform B protein.
Length = 219
Score = 31.5 bits (68), Expect = 2.6
Identities = 27/97 (27%), Positives = 45/97 (46%)
Frame = +3
Query: 234 KTADPMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYE 413
K DP+ + + +DY LPDA+ ++ VA ID ++ + +L +I A E E
Sbjct: 28 KQQDPVREVVMKYIDYFLPDASGTSAVA-IDNKIEQAMDLVKSHLMI--AVREEVEVLKE 84
Query: 414 AALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKL 524
+++ LEL +L N P +QL+L
Sbjct: 85 RISELMDKINKLELE----NSILKSNIPQETLQQLQL 117
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,702,592
Number of Sequences: 53049
Number of extensions: 1015565
Number of successful extensions: 3402
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3244
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7028721225
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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