Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_B19
(1307 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 118 1e-26
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 114 1e-25
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 44 3e-04
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 42 0.001
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 40 0.006
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 34 0.22
03_01_0249 - 1935355-1935827,1936129-1936330 33 0.38
01_01_1176 - 9372879-9373097,9373814-9374278,9374372-9375447,937... 32 1.1
11_06_0584 - 25220371-25222917 31 2.0
07_03_0803 - 21620754-21620955,21621718-21621780,21622172-216222... 30 4.6
06_01_0611 + 4420873-4422207 30 4.6
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 29 8.1
02_03_0179 + 16025962-16026143,16026570-16026684,16026852-160270... 29 8.1
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 118 bits (284), Expect = 1e-26
Identities = 83/292 (28%), Positives = 122/292 (41%), Gaps = 7/292 (2%)
Frame = +2
Query: 134 GTDVKVAPNFVFGEXNKSEXFLKKFPAGKVPAFESADGKVLLTESNAIAYYVA----NES 301
G V++ NF G NK+ FLK P GK+P E+ +G V ESNAIA YVA N S
Sbjct: 49 GVKVELTKNFEMGVSNKTPEFLKMNPLGKIPVLETPEGAVF--ESNAIARYVARLKDNSS 106
Query: 302 LRGGDLATQARVWQWASWSDXELLPASCAWVFPYLGIMQFXKQNVERAKSDXXXXXXXXX 481
L G L + + QW +S E+ W++P LG + E A +
Sbjct: 107 LCGSSLIDYSHIEQWMDFSATEVDANIGRWLYPRLGFGPYVPVLEEFAITSLKRSLGALN 166
Query: 482 XXXXTRTFLVTERITLADVIVFSTLLHAFQHVLXPSVRSSLINVQRWFLTVAHQPQVSAV 661
+ T+LV +TLAD+++ L + F +L S S +V+R+F T+ +QP V
Sbjct: 167 THLASNTYLVGHSVTLADIVMTCNLYYGFVRILIKSFTSEFPHVERYFWTMVNQPNFKKV 226
Query: 662 VGSLTLCAAPPTYDPKKYQELAGAXNXXXXXXXXXXXXXXXXXXXXXVVPDLXXXXLEKP 841
+G + P K P KP
Sbjct: 227 IGDFKQAESVPPVQKKAAPPKESKAKEAKKEAPKEAPKPKVEASEEEEAP--------KP 278
Query: 842 KESKDPFXSMPKGTFNMDDFXRVYSN---XXXXXSIPYFWXXFDPXXYSIWY 988
K K+P +P +D++ R+YSN +I FW +DP YS+W+
Sbjct: 279 K-PKNPLDLLPPSKMILDEWKRLYSNTKTNFREIAIKGFWDMYDPEGYSLWF 329
>02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 114 bits (275), Expect = 1e-25
Identities = 85/301 (28%), Positives = 129/301 (42%), Gaps = 16/301 (5%)
Frame = +2
Query: 134 GTDVKVAPNFVFGEXNKSEXFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANES---- 301
G V++A NF G NK+ +LK P GKVP E+ DG V ESNAIA YV + S
Sbjct: 586 GVKVELAKNFQMGVSNKTPEYLKMNPIGKVPILETPDGPVF--ESNAIARYVLSSSHFPE 643
Query: 302 ---------LRGGDLATQARVWQWASWSDXELLPASCAWVFPYLGIMQFXKQNVERAKSD 454
L G L A + QW +S E+ + W+FP LG + + E A +
Sbjct: 644 VTRSKSDNPLYGSSLIEYAHIEQWIDFSATEVDANTGKWLFPRLGFAPYVAVSEEAAIAA 703
Query: 455 XXXXXXXXXXXXXTRTFLVTERITLADVIVFSTLLHAFQHVLXPSVRSSLINVQRWFLTV 634
+ T+LV +TLAD+++ L F ++ + S +V+R+F T+
Sbjct: 704 LKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKNFTSEFPHVERYFWTM 763
Query: 635 AHQPQVSAVVGSLTLCAAPPTYDPKKYQELAGAXNXXXXXXXXXXXXXXXXXXXXXVVPD 814
+QP V+G + + P + Q+ A A P+
Sbjct: 764 VNQPNFKKVMGDVKQADSVP-----QVQKKAAAPKEQKPKEAKKEAPKEAPKPKAAEKPE 818
Query: 815 LXXXXLEKPKESKDPFXSMPKGTFNMDDFXRVYSN---XXXXXSIPYFWXXFDPXXYSIW 985
KPK K+P +P +D++ R+YSN +I FW +DP YS+W
Sbjct: 819 -EEEEAPKPK-PKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLW 876
Query: 986 Y 988
+
Sbjct: 877 F 877
Score = 108 bits (259), Expect = 1e-23
Identities = 83/301 (27%), Positives = 123/301 (40%), Gaps = 16/301 (5%)
Frame = +2
Query: 134 GTDVKVAPNFVFGEXNKSEXFLKKFPAGKVPAFESADGKVLLTESNAIAYYV-------- 289
G V++ NF G NK+ FLK P GK+P E+ DG V ESNAIA YV
Sbjct: 25 GVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETPDGPVF--ESNAIARYVLSHCHFPE 82
Query: 290 -----ANESLRGGDLATQARVWQWASWSDXELLPASCAWVFPYLGIMQFXKQNVERAKSD 454
A+ L G L A + QW +S E+ W++P LGI + + E A +
Sbjct: 83 VTRSKADNPLYGSSLIEYAHIEQWNDFSATEVDANIGKWLYPRLGIAPYVAVSEEAAIAA 142
Query: 455 XXXXXXXXXXXXXTRTFLVTERITLADVIVFSTLLHAFQHVLXPSVRSSLINVQRWFLTV 634
+ T+LV +TLAD+++ L F ++ S S +V+R+F T+
Sbjct: 143 LKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKSFTSEFPHVERYFWTM 202
Query: 635 AHQPQVSAVVGSLTLCAAPPTYDPKKYQELAGAXNXXXXXXXXXXXXXXXXXXXXXVVPD 814
+QP V+G + + P K V
Sbjct: 203 VNQPNFKKVLGDVKQAESVPPVQKK----------APPPKEQKPKEAKKEAPKPKAVEKP 252
Query: 815 LXXXXLEKPKESKDPFXSMPKGTFNMDDFXRVYSN---XXXXXSIPYFWXXFDPXXYSIW 985
KPK K+P +P +D++ R+YSN +I FW +DP YS+W
Sbjct: 253 EEEEEAPKPK-PKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLW 311
Query: 986 Y 988
+
Sbjct: 312 F 312
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 70 VLXTYPENFRAYKALIAAQYSGH*CESSTEFRI 168
VL T+ N A+KALIAA+YSG E + F++
Sbjct: 565 VLHTFDGNKNAFKALIAAEYSGVKVELAKNFQM 597
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 44.0 bits (99), Expect = 3e-04
Identities = 31/71 (43%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +2
Query: 149 VAPNFVFGEXNKSEXFLKKFPAGKVPAFESADGKVLLTESNAIAYYVAN-----ESLRGG 313
VA + GE N+S L + P GK+PAFE DG+V L ES AI YV + LR G
Sbjct: 31 VAVDMAAGE-NRSRHHLARSPFGKIPAFE--DGEVTLFESRAIQRYVLRNYNKPDLLREG 87
Query: 314 DLATQARVWQW 346
+L A V W
Sbjct: 88 NLEESAMVDMW 98
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 41.9 bits (94), Expect = 0.001
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Frame = +2
Query: 134 GTDVKVAPNFVFGEXNKSEXFLKKFPAGKVPAFESADGKVLLTESNAIAYYV----ANES 301
G + +V P + +K + + P G+VPAFE DG + L ES AI+ Y+ ++
Sbjct: 26 GAEYEVVPVDMSTGEHKRPPHISRNPFGQVPAFE--DGDLTLFESRAISKYILRKHGSDL 83
Query: 302 LRGGDLATQARVWQW----ASWSDXELLPA--SCAWVFPYLG---IMQFXKQNVERAKSD 454
LR +L+ A V W +S D + P C V ++G + +++E+ K
Sbjct: 84 LRESNLSESAMVDVWLEVESSHFDGAMSPIIFQCFIVPMFMGGATDIGVVNESLEKLKK- 142
Query: 455 XXXXXXXXXXXXXTRTFLVTERITLADVIVFSTLLHAFQHVLXPSVRSSLINVQRWFLTV 634
+L + I+LAD+ F T+ + SV + V+ W V
Sbjct: 143 ---ALEVYEAQLSKSKYLAGDFISLADISHFPTVYYLLASA-HASVLEAYPRVKAWIDDV 198
Query: 635 AHQPQVSAVVGSLTLCAA 688
+P V V +L + +A
Sbjct: 199 MQRPSVKKVTEALKMPSA 216
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 39.5 bits (88), Expect = 0.006
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Frame = +2
Query: 134 GTDVK-VAPNFVFGEXNKSEXFLKKFPAGKVPAFESADGKVLLTESNAIAYYVAN----- 295
G D + V +F+ GE N E +++ P GK+PA + DG ++L ES AIA Y+
Sbjct: 26 GADYELVTVDFLAGEQNSPEH-VERNPFGKIPALQ--DGDLVLFESRAIAKYILRKYKSS 82
Query: 296 --ESLRGGDLATQARVWQWASWSDXELLPASCAWVF 397
+ LR D+ A V W + PA VF
Sbjct: 83 KVDLLRESDIREAALVDVWTEVEAHQYYPALSPIVF 118
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 34.3 bits (75), Expect = 0.22
Identities = 47/195 (24%), Positives = 74/195 (37%), Gaps = 14/195 (7%)
Frame = +2
Query: 134 GTDVKVAPNFVFGEX-NKSEXFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANES--- 301
G D ++ + FG+ +K L + P G+VPAF+ DG ++L ES AI Y+ +
Sbjct: 26 GADYEIV-DVDFGDREHKGPDHLARNPFGQVPAFQ--DGDLMLFESRAICRYILRKHRAT 82
Query: 302 -----LRGGDLATQARVWQWASWSDXELLPASCA-----WVFPYLGIMQFXKQNVERAKS 451
LR GD + A V W P+ A V P LG + E
Sbjct: 83 DEANLLREGDPSESAVVDAWLDVEALRYEPSVHAVFVQRRVVPALGGEPDERVIAESVAR 142
Query: 452 DXXXXXXXXXXXXXTRTFLVTERITLADVIVFSTLLHAFQHVLXPSVRSSLINVQRWFLT 631
TR +L ++LAD+ F + + V + V W+
Sbjct: 143 LRETLAVYEARLEATRGYLAGGEVSLADLSHFPYTRYFMEMPYEVPVFGAYPRVTAWWER 202
Query: 632 VAHQPQVSAVVGSLT 676
+ +P V V ++
Sbjct: 203 LLTRPSVRKVAAMMS 217
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 33.5 bits (73), Expect = 0.38
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +2
Query: 179 NKSEXFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQAR 334
+KS FLK P G+VPAF+ D + ES AI Y+ ++ G+ R
Sbjct: 42 HKSPSFLKLQPFGQVPAFK--DSLTTVFESRAICRYICDQYADSGNKTLMGR 91
>01_01_1176 -
9372879-9373097,9373814-9374278,9374372-9375447,
9375534-9375687,9375783-9375879,9376238-9376374
Length = 715
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +2
Query: 494 TRTFLVTERITLADVIVFSTLLHAFQHVLXPSVRSSLINVQRWFLTVAHQPQ-----VSA 658
+RTFLV+ +++AD++V+S L Q N+ RWF ++A VSA
Sbjct: 108 SRTFLVSYGLSIADIVVWSNLAGTGQRWESLRRSKKYQNLVRWFNSIADYSDTLDEVVSA 167
Query: 659 VVGSLTLCAAP 691
VG + +P
Sbjct: 168 YVGKRGIGKSP 178
>11_06_0584 - 25220371-25222917
Length = 848
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -3
Query: 519 LSVTRKVRVRRCPSSXFKXASRSDFARSTFCXLNCMIPR*GKTQAQEAGSSSLSD 355
+++ + R R P + R + +ST C C +PR K +AG S+++D
Sbjct: 386 INIRKTARRRELPQKQHQHKLR--WTQSTICCCYCRVPRIMKATTADAGGSNIND 438
>07_03_0803 -
21620754-21620955,21621718-21621780,21622172-21622250,
21623312-21623424,21623500-21623798
Length = 251
Score = 29.9 bits (64), Expect = 4.6
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = -2
Query: 685 RTERERADDGRHLRLVGD--GQEPTLN--VYQRRTDARV*HVLESMQQCTEDNDIGKCDS 518
R R +G H RLV D Q+P + ++ R DA L +Q+CT I C S
Sbjct: 67 RKSLNRNHEGGHQRLVKDYFSQDPIYSDKQFRARRDASSRQGLSPLQKCTAAIRILACGS 126
Query: 517 LGN 509
LG+
Sbjct: 127 LGD 129
>06_01_0611 + 4420873-4422207
Length = 444
Score = 29.9 bits (64), Expect = 4.6
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = +1
Query: 595 FVADKRSAL-----VPDRRPPAASVGRRRLAHALC 684
+V D+ +AL P RRPPA S RRRLA + C
Sbjct: 279 YVMDEHAALRVAVRTPKRRPPARSRSRRRLALSEC 313
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 188 EXFLKKFPAGKVPAFESADGK 250
+ FLK P GKVP F DGK
Sbjct: 47 QLFLKISPEGKVPVFNGGDGK 67
>02_03_0179 +
16025962-16026143,16026570-16026684,16026852-16027065,
16027346-16027397,16027411-16027696
Length = 282
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -1
Query: 692 EEPHRA*ASRRRPTLAAGGRRSGTNAERLSATNGRSGXARAGKHAA 555
++PHR A R+P A+G G A R+S + + R HAA
Sbjct: 32 QQPHRP-APLRQPLAASGHCGGGRGARRVSRSRSSAAHPRGRLHAA 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,205,082
Number of Sequences: 37544
Number of extensions: 479102
Number of successful extensions: 1276
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4085517852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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