Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_B18
         (1315 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_1029 - 10419090-10419476,10419721-10419822,10420367-104204...    30   3.5  
10_02_0150 - 5883942-5884328,5884573-5884677,5885219-5885311,588...    29   6.2  
10_08_0201 + 15746790-15746889,15748726-15748863,15750715-157507...    29   8.1  
02_03_0246 - 16807619-16808145,16808208-16808868                       29   8.1  

>08_01_1029 -
           10419090-10419476,10419721-10419822,10420367-10420459,
           10420542-10420754,10421625-10421654
          Length = 274

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
 Frame = +2

Query: 719 RSQSPDSTMNGSQSPKRNGGLXDEKKHNTRCSKRTETQEDRHYYKVVSTKLXSSGGF--Q 892
           R+ SP S+M  ++  K+   +    KH  +C K  +++E   Y+++  ++   +  +  Q
Sbjct: 55  RTTSPLSSMTDNEW-KQLVDMWSTPKHKEKCIKNKDSRELVQYHQMTGSRSYVAQCYVMQ 113

Query: 893 TKRKDSPP 916
           TK KD PP
Sbjct: 114 TKFKDVPP 121


>10_02_0150 -
           5883942-5884328,5884573-5884677,5885219-5885311,
           5885394-5885606,5886976-5887005
          Length = 275

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
 Frame = +2

Query: 719 RSQSPDSTMNGSQSPKRNGGLXDEKKHNTRCSKRTETQEDRHYYKVVSTKLXSSGGF--- 889
           R+ SP S+M  ++  K+   +    KH  +C K  +++E   Y+++  ++   +  +   
Sbjct: 55  RTTSPLSSMTDNEW-KQLVDMWSTPKHKEKCIKNKDSRELVQYHQMTGSRSYVAQCYVMK 113

Query: 890 QTKRKDSPP 916
           QTK KD PP
Sbjct: 114 QTKFKDVPP 122


>10_08_0201 +
           15746790-15746889,15748726-15748863,15750715-15750792,
           15751251-15752632
          Length = 565

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
 Frame = +2

Query: 527 LHRRSPHHLAFVRDHTNFLALDSLISSGADVTTFLDKATPINGE---RRSLRKMCNGDIE 697
           L   + H    V  + NF++   L  +GADV+   +K   ++GE    R+ +K+CN  +E
Sbjct: 430 LENMNKHLGGHVTSYCNFIS--QLACTGADVSLLREKGIIVHGEASDERAAQKLCNLCVE 487


>02_03_0246 - 16807619-16808145,16808208-16808868
          Length = 395

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 227 PCCSGRLRPTAPTCCSPCT 283
           PCC GR R  A    SPCT
Sbjct: 117 PCCCGRRRRAASPSASPCT 135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,207,699
Number of Sequences: 37544
Number of extensions: 433249
Number of successful extensions: 1041
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4108797156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)