Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_B17
         (1276 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0499 + 10989645-10989929,10990303-10990395,10990952-109910...   186   2e-47

>02_02_0499 +
           10989645-10989929,10990303-10990395,10990952-10991066,
           10991187-10991297,10991701-10991783,10991872-10991929,
           10992490-10992569
          Length = 274

 Score =  186 bits (454), Expect = 2e-47
 Identities = 103/210 (49%), Positives = 132/210 (62%), Gaps = 4/210 (1%)
 Frame = +2

Query: 302 KQEKRLIVILENAQLESVKNGNSFELLNCDDHGHILRKNDRDPGSCRPDITHQSLLMLMD 481
           K+    I +LE A LE  K G + ++LN DDH + LRK +R+P   RPDI HQ+LL + D
Sbjct: 74  KRRPGAIFVLERACLEVGKVGKTMQILNSDDHANYLRKQNRNPADYRPDIIHQALLAIFD 133

Query: 482 SPLNRAGLLQ-VYIHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKFAIRASDGPMKLL 658
           SPL +AG LQ VY+ TEK VL EI P  R+P           QLL K +I A     KLL
Sbjct: 134 SPLTKAGRLQAVYVRTEKGVLFEIKPYVRMP----------PQLLQKLSITAVGKREKLL 183

Query: 659 KVIKNPVTSHLPVGVKKITMSFSSKIVQNCRDLVPK---DEPIVMVIGAMAHGKVEVDYS 829
            VIKNPVT +LPVG KKI +S+S++   N  D V K   D P+V V+GAMAHGK++ +YS
Sbjct: 184 NVIKNPVTRYLPVGAKKIGLSYSAEKSVNLFDYVAKSSDDVPLVFVVGAMAHGKIDNEYS 243

Query: 830 EDVISISNYPLSAALTCAKLGSAFEEVWGV 919
           +D I I NYPLSAA    ++ SA E+ W +
Sbjct: 244 DDYIQICNYPLSAACCLNRICSALEQKWNI 273


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,609,858
Number of Sequences: 37544
Number of extensions: 466729
Number of successful extensions: 984
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3957481680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)