Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_B17
         (1276 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    28   0.51 
AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    25   6.2  
DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domai...    24   8.2  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 28.3 bits (60), Expect = 0.51
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +2

Query: 275 KHLVTSHIKKQEKRLIVILENAQLESVKNGNSFELLNCDDHGHILRKNDRDPGSCRPD 448
           K L    +K+     IVILEN+ L  V++ +  E+    DH  +++KN R+   C  +
Sbjct: 412 KSLELKSLKRVNSGSIVILENSDLCFVEDIDWSEIKKSSDHEVMVQKN-RNATECHEE 468


>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 24.6 bits (51), Expect = 6.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 392 HHSLIAQSYFHFSR 351
           HH ++ +S+FHF R
Sbjct: 7   HHDVVKESFFHFIR 20


>DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 161

 Score = 24.2 bits (50), Expect = 8.2
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 347 ESVKNGNSFELLNCDDHGHILRKNDRDPGSC 439
           ES+  GN+F       HG I RK+  + G C
Sbjct: 78  ESLYMGNAFRNYYESIHGAITRKSTLNDGGC 108


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 977,433
Number of Sequences: 2352
Number of extensions: 19791
Number of successful extensions: 45
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 146331426
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)