Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_B17
         (1276 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U72514-1|AAC51641.1|  239|Homo sapiens C2f protein.                   320   5e-87
BC055314-1|AAH55314.1|  244|Homo sapiens EMG1 nucleolar protein ...   320   5e-87
U47924-20|AAB51325.1|  151|Homo sapiens C2f protein.                  244   7e-64

>U72514-1|AAC51641.1|  239|Homo sapiens C2f protein.
          Length = 239

 Score =  320 bits (787), Expect = 5e-87
 Identities = 149/203 (73%), Positives = 171/203 (84%)
 Frame = +2

Query: 311 KRLIVILENAQLESVKNGNSFELLNCDDHGHILRKNDRDPGSCRPDITHQSLLMLMDSPL 490
           +RLIV+LE A LE+VK G ++ELLNCD H  IL KN RDPG  RPDITHQSLLMLMDSPL
Sbjct: 36  RRLIVVLEGASLETVKVGKTYELLNCDKHKSILLKNGRDPGEARPDITHQSLLMLMDSPL 95

Query: 491 NRAGLLQVYIHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKFAIRASDGPMKLLKVIK 670
           NRAGLLQVYIHT+KNVLIE+NPQTRIPRTF RF GLMVQLLHK ++RA+DGP KLLKVIK
Sbjct: 96  NRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIK 155

Query: 671 NPVTSHLPVGVKKITMSFSSKIVQNCRDLVPKDEPIVMVIGAMAHGKVEVDYSEDVISIS 850
           NPV+ H PVG  K+  SFS  +V + R+LVP  +PIV V+GA AHGKV V+Y+E ++SIS
Sbjct: 156 NPVSDHFPVGCMKVGTSFSIPVVSDVRELVPSSDPIVFVVGAFAHGKVSVEYTEKMVSIS 215

Query: 851 NYPLSAALTCAKLGSAFEEVWGV 919
           NYPLSAALTCAKL +AFEEVWGV
Sbjct: 216 NYPLSAALTCAKLTTAFEEVWGV 238


>BC055314-1|AAH55314.1|  244|Homo sapiens EMG1 nucleolar protein
           homolog (S. cerevisiae) protein.
          Length = 244

 Score =  320 bits (787), Expect = 5e-87
 Identities = 149/203 (73%), Positives = 171/203 (84%)
 Frame = +2

Query: 311 KRLIVILENAQLESVKNGNSFELLNCDDHGHILRKNDRDPGSCRPDITHQSLLMLMDSPL 490
           +RLIV+LE A LE+VK G ++ELLNCD H  IL KN RDPG  RPDITHQSLLMLMDSPL
Sbjct: 41  RRLIVVLEGASLETVKVGKTYELLNCDKHKSILLKNGRDPGEARPDITHQSLLMLMDSPL 100

Query: 491 NRAGLLQVYIHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKFAIRASDGPMKLLKVIK 670
           NRAGLLQVYIHT+KNVLIE+NPQTRIPRTF RF GLMVQLLHK ++RA+DGP KLLKVIK
Sbjct: 101 NRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIK 160

Query: 671 NPVTSHLPVGVKKITMSFSSKIVQNCRDLVPKDEPIVMVIGAMAHGKVEVDYSEDVISIS 850
           NPV+ H PVG  K+  SFS  +V + R+LVP  +PIV V+GA AHGKV V+Y+E ++SIS
Sbjct: 161 NPVSDHFPVGCMKVGTSFSIPVVSDVRELVPSSDPIVFVVGAFAHGKVSVEYTEKMVSIS 220

Query: 851 NYPLSAALTCAKLGSAFEEVWGV 919
           NYPLSAALTCAKL +AFEEVWGV
Sbjct: 221 NYPLSAALTCAKLTTAFEEVWGV 243


>U47924-20|AAB51325.1|  151|Homo sapiens C2f protein.
          Length = 151

 Score =  244 bits (596), Expect = 7e-64
 Identities = 112/150 (74%), Positives = 129/150 (86%)
 Frame = +2

Query: 470 MLMDSPLNRAGLLQVYIHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKFAIRASDGPM 649
           MLMDSPLNRAGLLQVYIHT+KNVLIE+NPQTRIPRTF RF GLMVQLLHK ++RA+DGP 
Sbjct: 1   MLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQ 60

Query: 650 KLLKVIKNPVTSHLPVGVKKITMSFSSKIVQNCRDLVPKDEPIVMVIGAMAHGKVEVDYS 829
           KLLKVIKNPV+ H PVG  K+  SFS  +V + R+LVP  +PIV V+GA AHGKV V+Y+
Sbjct: 61  KLLKVIKNPVSDHFPVGCMKVGTSFSIPVVSDVRELVPSSDPIVFVVGAFAHGKVSVEYT 120

Query: 830 EDVISISNYPLSAALTCAKLGSAFEEVWGV 919
           E ++SISNYPLSAALTCAKL +AFEEVWGV
Sbjct: 121 EKMVSISNYPLSAALTCAKLTTAFEEVWGV 150


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,596,438
Number of Sequences: 237096
Number of extensions: 2579280
Number of successful extensions: 4998
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4998
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18275348360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)