Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_B17
         (1276 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-641|AAF45956.2|  252|Drosophila melanogaster CG3527-PA ...   339   4e-93
BT021308-1|AAX33456.1|  252|Drosophila melanogaster RE17227p pro...   333   3e-91
BT001690-1|AAN71445.1|  647|Drosophila melanogaster RE58362p pro...    31   4.5  
AE013599-1057|AAF58813.2|  639|Drosophila melanogaster CG18408-P...    31   4.5  

>AE014298-641|AAF45956.2|  252|Drosophila melanogaster CG3527-PA
           protein.
          Length = 252

 Score =  339 bits (834), Expect = 4e-93
 Identities = 164/244 (67%), Positives = 191/244 (78%), Gaps = 9/244 (3%)
 Frame = +2

Query: 215 MGKKRKLVS-KDDDFEFDPIPKHLVTSHIKKQEKRLIVILENAQLESVKNGNSFELLNCD 391
           + +KRK V  K DD EFD   K     H+   EKRLI++LE AQLE+VK  N+FELLNCD
Sbjct: 8   INRKRKFVGRKADDPEFDLDKKQFKVLHLNATEKRLIIVLEGAQLETVKVHNTFELLNCD 67

Query: 392 DHGHILRKNDRDPGSCRPDITHQSLLMLMDSPLNRAGLLQVYIHTEKNVLIEINPQTRIP 571
           DH  I+RKN RDPGSCRPDITHQ LLML DSPLNRAGLLQV++ TE NVLIEINPQTRIP
Sbjct: 68  DHAGIMRKNQRDPGSCRPDITHQCLLMLFDSPLNRAGLLQVFVRTEHNVLIEINPQTRIP 127

Query: 572 RTFKRFAGLMVQLLHKFAIRASDGPMKLLKVIKNPVTSHLPVGVKKITMSFSSKIVQNCR 751
           RTFKRFAGLMVQLLHKF IRA+D   +L+ VIKNP+T H+PVG KK  MSFS K++ NCR
Sbjct: 128 RTFKRFAGLMVQLLHKFQIRANDSSRRLMSVIKNPITDHVPVGCKKYAMSFSGKLLPNCR 187

Query: 752 DLVPK--------DEPIVMVIGAMAHGKVEVDYSEDVISISNYPLSAALTCAKLGSAFEE 907
           DLVP         DEP+V+VIGA AHG ++ DY+E++ SISNYPLSAA+ C+K+ SAFEE
Sbjct: 188 DLVPHGDETSASYDEPVVIVIGAFAHGVLKTDYTEELFSISNYPLSAAIACSKICSAFEE 247

Query: 908 VWGV 919
           VWGV
Sbjct: 248 VWGV 251


>BT021308-1|AAX33456.1|  252|Drosophila melanogaster RE17227p
           protein.
          Length = 252

 Score =  333 bits (819), Expect = 3e-91
 Identities = 162/244 (66%), Positives = 189/244 (77%), Gaps = 9/244 (3%)
 Frame = +2

Query: 215 MGKKRKLVS-KDDDFEFDPIPKHLVTSHIKKQEKRLIVILENAQLESVKNGNSFELLNCD 391
           + +KRK V  K DD EFD   K     H+   EKRLI++LE AQLE+VK  N+FELLNCD
Sbjct: 8   INRKRKFVGRKADDPEFDLDKKQFKVLHLNATEKRLIIVLEGAQLETVKVHNTFELLNCD 67

Query: 392 DHGHILRKNDRDPGSCRPDITHQSLLMLMDSPLNRAGLLQVYIHTEKNVLIEINPQTRIP 571
           DH  I+RKN RDPGSCRPDITHQ LLML DSPLNRA LLQV++ TE NVLIEINPQTRIP
Sbjct: 68  DHAGIMRKNQRDPGSCRPDITHQCLLMLFDSPLNRADLLQVFVRTEHNVLIEINPQTRIP 127

Query: 572 RTFKRFAGLMVQLLHKFAIRASDGPMKLLKVIKNPVTSHLPVGVKKITMSFSSKIVQNCR 751
            TFKRFAGLMVQLLHKF IRA+D   +L+ VIKNP+T H+PVG KK  MSFS K++ NCR
Sbjct: 128 WTFKRFAGLMVQLLHKFQIRANDSSRRLMSVIKNPITDHVPVGCKKYAMSFSGKLLPNCR 187

Query: 752 DLVPK--------DEPIVMVIGAMAHGKVEVDYSEDVISISNYPLSAALTCAKLGSAFEE 907
           DLVP         DEP+V+VIGA AHG ++ DY+E++ SISNYPLSAA+ C+K+ SAFEE
Sbjct: 188 DLVPHGDETSASYDEPVVIVIGAFAHGVLKTDYTEELFSISNYPLSAAIACSKICSAFEE 247

Query: 908 VWGV 919
           VWGV
Sbjct: 248 VWGV 251


>BT001690-1|AAN71445.1|  647|Drosophila melanogaster RE58362p
           protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 413 KNDRDPGSCRPDITHQSLLMLMDSPLNRAGLLQVYIHTEK 532
           +  ++P    P +   S L L D PLN A LLQV +H ++
Sbjct: 16  RRSKEPAIVAPKVAKSSSLRLKDVPLNDAQLLQV-LHAQR 54


>AE013599-1057|AAF58813.2|  639|Drosophila melanogaster CG18408-PI,
           isoform I protein.
          Length = 639

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 413 KNDRDPGSCRPDITHQSLLMLMDSPLNRAGLLQVYIHTEK 532
           +  ++P    P +   S L L D PLN A LLQV +H ++
Sbjct: 8   RRSKEPAIVAPKVAKSSSLRLKDVPLNDAQLLQV-LHAQR 46


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,958,550
Number of Sequences: 53049
Number of extensions: 831259
Number of successful extensions: 1538
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1536
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6865736385
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)