Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_B14
         (1399 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0238 - 1988688-1988830,1988989-1989257,1989339-1989600,198...    29   6.6  
07_01_0231 - 1698244-1700154                                           29   8.7  

>08_01_0238 -
           1988688-1988830,1988989-1989257,1989339-1989600,
           1989693-1989805,1990560-1990594,1990771-1990878,
           1992178-1992483
          Length = 411

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 948 CSWVCSPMRYNLAYFQILTIQILMKGSLVCFLI 850
           C+WV S    N  Y   LT+  ++  S+VCF I
Sbjct: 101 CTWVLSSKEINFPYPVALTLLHMVFSSVVCFAI 133


>07_01_0231 - 1698244-1700154
          Length = 636

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 286 LGVIVTHRRTRAVPEVSRAILHLDQDCQDPEVN 384
           LG++ +H  + A P + + + +LD D Q PE+N
Sbjct: 600 LGLLCSHPFSNARPNMRQVLQYLDGDAQLPELN 632


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,628,682
Number of Sequences: 37544
Number of extensions: 351368
Number of successful extensions: 793
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4408801040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)