Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_B13
(1405 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 245 2e-63
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 126 2e-27
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 107 5e-22
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 100 2e-19
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 95 4e-18
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 89 3e-16
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 85 6e-15
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 78 6e-13
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 69 2e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 6e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 6e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 58 6e-07
UniRef50_Q51612 Cluster: Putative uncharacterized protein; n=3; ... 50 2e-04
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.004
UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1; ... 45 0.005
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.007
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.089
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.16
UniRef50_A7SYZ9 Cluster: Predicted protein; n=1; Nematostella ve... 35 4.4
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 35 5.9
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 245 bits (600), Expect = 2e-63
Identities = 115/126 (91%), Positives = 116/126 (92%)
Frame = +1
Query: 475 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 654
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 655 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSX 834
CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLS
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSP 121
Query: 835 TR*DTT 852
TR DTT
Sbjct: 122 TRKDTT 127
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 126 bits (303), Expect = 2e-27
Identities = 73/120 (60%), Positives = 78/120 (65%)
Frame = +1
Query: 307 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 486
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 487 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 666
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 107 bits (258), Expect = 5e-22
Identities = 49/53 (92%), Positives = 50/53 (94%)
Frame = +3
Query: 771 VHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRIXXARYVGGATEXLK 929
+HEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRI ARYVGGATE LK
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRARYVGGATEFLK 53
Score = 55.6 bits (128), Expect = 3e-06
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1
Query: 928 KWWPNYGYXKXTVFGICALLXPXTXGKXI 1014
KWWPNYGY + TVFGICALL P T GK +
Sbjct: 53 KWWPNYGYTRRTVFGICALLKPVTFGKRV 81
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 99.5 bits (237), Expect = 2e-19
Identities = 50/82 (60%), Positives = 59/82 (71%)
Frame = -2
Query: 861 VAISRVLPGXTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGE 682
+A RV PG TQDDSYR RS RAERGVRA+SPAWSERP P+ DT SVSYEKAPRFPKG+
Sbjct: 1 MAFLRVRPGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGK 60
Query: 681 RRTGIR*AAGSEQESARGSFQG 616
+ + +G Q R + +G
Sbjct: 61 KAEQV---SGKRQGRNRRAHEG 79
Score = 48.8 bits (111), Expect = 3e-04
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -3
Query: 686 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 567
+K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 95.1 bits (226), Expect = 4e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +1
Query: 493 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 654
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 88.6 bits (210), Expect = 3e-16
Identities = 49/94 (52%), Positives = 52/94 (55%)
Frame = +1
Query: 568 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCR 747
VR GETRQD K P P PPFSL + + GIS RCR
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 748 SFAPSWAVCTNPPFSPTAAPYPVTIVLSXTR*DT 849
SFAPSWAV NPPFSPTAAPYPVT+ LS TR T
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVTVHLSPTRKST 116
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 84.6 bits (200), Expect = 6e-15
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = -2
Query: 861 VAISRVLPGXTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN 736
+A+ R LPG TQDDSYRIRRSGRAERGVRAHSPAWSERPTPN
Sbjct: 1 MALRRALPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN 42
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 77.8 bits (183), Expect = 6e-13
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 633 VRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 743
+RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 69.3 bits (162), Expect = 2e-10
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = -2
Query: 861 VAISRVLPGXTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN*DT 727
+A R PG TQ +SYRIRRS RAERGV A+SPAWSERPTP+ DT
Sbjct: 1 MAFYRAFPGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 6e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 483 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 370
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 6e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 283 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 450
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 58.0 bits (134), Expect = 6e-07
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +1
Query: 382 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 555
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 556 IDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 654
I Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_Q51612 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Plasmid
ColE1
Length = 96
Score = 49.6 bits (113), Expect = 2e-04
Identities = 27/56 (48%), Positives = 27/56 (48%)
Frame = -2
Query: 1095 FXGGNLWXQTKNXR*PXVGFXXGSRVPNXFSXGXWXQQSADTKYCXFXVXVVRPPL 928
F NL K G GSR N FS G W QQSADTKYC V VV P L
Sbjct: 5 FSARNLLLANKKTTATNGGLFAGSRATNSFSEGNWLQQSADTKYCPSSVAVVGPLL 60
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.004
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 86 DPDMIRYIDEFGQTTTRMQ 142
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1;
Edwardsiella tarda|Rep: Putative uncharacterized protein
- Edwardsiella tarda
Length = 99
Score = 44.8 bits (101), Expect = 0.005
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +1
Query: 772 CTNPPFSPTAAPYPVTIVLSXTR*DTTYRHWQ 867
CTN PFSPT P VT++L+ T DT RHW+
Sbjct: 68 CTNSPFSPTITPVQVTVLLNPTLTDTQKRHWR 99
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.007
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 402 HSKAVIRLSTESGDNAGKNM 461
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.089
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 281 SALMNRPTRGERRFAYW 331
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.16
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 353 ERGSGRAPNTQTASPRALADSLMQ 282
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A7SYZ9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1107
Score = 35.1 bits (77), Expect = 4.4
Identities = 29/82 (35%), Positives = 36/82 (43%)
Frame = +1
Query: 568 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCR 747
+RG T Q D R P +CA RP R D C ++ WR HAVG
Sbjct: 638 LRGPATGQAVVDPGRMPRPV-TCA--GRPTRGLDLCGLATVSWVWRSTKCHAVG------ 688
Query: 748 SFAPSWAVCTNPPFSPTAAPYP 813
++P + CT P S APYP
Sbjct: 689 KYSPP-STCTRRPKSQRDAPYP 709
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.7 bits (76), Expect = 5.9
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 713 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 609
+R+R A RR GG+ G+R+GRNR+ + RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ--QRGQR 387
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,099,561,051
Number of Sequences: 1657284
Number of extensions: 21558481
Number of successful extensions: 57826
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 54273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57773
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 147396980276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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