Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_B12
         (1281 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071424-1|AAL49046.1|  537|Drosophila melanogaster RE50559p pro...   115   1e-25
AE014296-3424|AAF51644.1|  537|Drosophila melanogaster CG3634-PA...   115   1e-25
AY061375-1|AAL28923.1|  459|Drosophila melanogaster LD29716p pro...    30   5.9  
AE014298-822|AAN09156.1|  459|Drosophila melanogaster CG32756-PA...    30   5.9  

>AY071424-1|AAL49046.1|  537|Drosophila melanogaster RE50559p
           protein.
          Length = 537

 Score =  115 bits (277), Expect = 1e-25
 Identities = 48/60 (80%), Positives = 55/60 (91%)
 Frame = +2

Query: 170 MWDTNAYLSALTPKFYVALTGTSSLISGLILIFEWWYFRTYGTSFIEQVSLSHLGPWLGG 349
           MWD++ +LS LTPKFYVALTGTSSLISGLILIFEWWYFR YGTSFIEQVS++H+ PW+ G
Sbjct: 1   MWDSSMFLSTLTPKFYVALTGTSSLISGLILIFEWWYFRKYGTSFIEQVSINHISPWING 60



 Score = 98.7 bits (235), Expect = 1e-20
 Identities = 59/173 (34%), Positives = 73/173 (42%), Gaps = 4/173 (2%)
 Frame = +2

Query: 404 CKVWRNPMALLRGAEYGRLWSAARRAPLTYYDMNLSAQDHQAWFSCGGDQSPVE-EAMNR 580
           CKVWRNP+ L RGAEY R + A  + PLTYYDMNLSAQDHQ +F+C GD    E E M  
Sbjct: 114 CKVWRNPLNLFRGAEYQRFFWATSKEPLTYYDMNLSAQDHQTFFTCEGDARKEEYEIMQT 173

Query: 581 AWXXXXXXXXXXXXXXXXXXXXXCXXXXXXXXEEDSPTVQEAERVLK---XXXXXXXXXX 751
           AW                     C        EE++ T+ EAE++LK             
Sbjct: 174 AWRERNPMQRIKSAHSALEINAECAPAYILLAEEEAMTIMEAEKILKTALKVAEINYRKS 233

Query: 752 XXXXXXXXXXXXXXXXXXXVLXXVKRXVXMCARXXGXXPXXRXNVREXXRXXP 910
                              VL  +KR + MCAR  G         R+  +  P
Sbjct: 234 QATQHQGAIADGMHRRDTNVLIYIKRRLAMCARKLGKLKEAAKMFRDLTKEIP 286


>AE014296-3424|AAF51644.1|  537|Drosophila melanogaster CG3634-PA
           protein.
          Length = 537

 Score =  115 bits (277), Expect = 1e-25
 Identities = 48/60 (80%), Positives = 55/60 (91%)
 Frame = +2

Query: 170 MWDTNAYLSALTPKFYVALTGTSSLISGLILIFEWWYFRTYGTSFIEQVSLSHLGPWLGG 349
           MWD++ +LS LTPKFYVALTGTSSLISGLILIFEWWYFR YGTSFIEQVS++H+ PW+ G
Sbjct: 1   MWDSSMFLSTLTPKFYVALTGTSSLISGLILIFEWWYFRKYGTSFIEQVSINHISPWING 60



 Score = 98.7 bits (235), Expect = 1e-20
 Identities = 59/173 (34%), Positives = 73/173 (42%), Gaps = 4/173 (2%)
 Frame = +2

Query: 404 CKVWRNPMALLRGAEYGRLWSAARRAPLTYYDMNLSAQDHQAWFSCGGDQSPVE-EAMNR 580
           CKVWRNP+ L RGAEY R + A  + PLTYYDMNLSAQDHQ +F+C GD    E E M  
Sbjct: 114 CKVWRNPLNLFRGAEYQRFFWATSKEPLTYYDMNLSAQDHQTFFTCEGDARKEEYEIMQT 173

Query: 581 AWXXXXXXXXXXXXXXXXXXXXXCXXXXXXXXEEDSPTVQEAERVLK---XXXXXXXXXX 751
           AW                     C        EE++ T+ EAE++LK             
Sbjct: 174 AWRERNPMQRIKSAHSALEINAECAPAYILLAEEEAMTIMEAEKILKTALKVAEINYRKS 233

Query: 752 XXXXXXXXXXXXXXXXXXXVLXXVKRXVXMCARXXGXXPXXRXNVREXXRXXP 910
                              VL  +KR + MCAR  G         R+  +  P
Sbjct: 234 QATQHQGAIADGMHRRDTNVLIYIKRRLAMCARKLGKLKEAAKMFRDLTKEIP 286


>AY061375-1|AAL28923.1|  459|Drosophila melanogaster LD29716p
           protein.
          Length = 459

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 17/31 (54%), Positives = 19/31 (61%)
 Frame = +3

Query: 684 IHRQYKRLNVY*RELGEQLRRLGXRTQPLDL 776
           IH + K LN Y R  G QLRR+   TQP DL
Sbjct: 142 IHAKDKELNQY-RTEGCQLRRVTVETQPFDL 171


>AE014298-822|AAN09156.1|  459|Drosophila melanogaster CG32756-PA
           protein.
          Length = 459

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 17/31 (54%), Positives = 19/31 (61%)
 Frame = +3

Query: 684 IHRQYKRLNVY*RELGEQLRRLGXRTQPLDL 776
           IH + K LN Y R  G QLRR+   TQP DL
Sbjct: 142 IHAKDKELNQY-RTEGCQLRRVTVETQPFDL 171


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,911,245
Number of Sequences: 53049
Number of extensions: 590104
Number of successful extensions: 1139
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6906482595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)