Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_B08
(1267 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF045645-2|AAC02609.1| 299|Caenorhabditis elegans Hypothetical ... 69 7e-12
AL031633-6|CAA21014.3| 225|Caenorhabditis elegans Hypothetical ... 64 3e-10
Z70306-1|CAA94322.1| 355|Caenorhabditis elegans Hypothetical pr... 58 2e-08
Z70755-4|CAA94783.2| 239|Caenorhabditis elegans Hypothetical pr... 52 1e-06
AF016447-9|AAG24009.1| 233|Caenorhabditis elegans Hypothetical ... 44 2e-04
AF003142-3|AAB54188.1| 739|Caenorhabditis elegans Him-three par... 33 0.57
U40953-2|AAB52647.1| 483|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z68760-5|CAE17823.1| 161|Caenorhabditis elegans Hypothetical pr... 30 4.0
U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated p... 29 5.3
U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated p... 29 5.3
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 5.3
M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related... 29 5.3
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 29 5.3
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 5.3
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 5.3
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 29 5.3
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 5.3
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 29 7.0
>AF045645-2|AAC02609.1| 299|Caenorhabditis elegans Hypothetical
protein K02D7.5 protein.
Length = 299
Score = 68.9 bits (161), Expect = 7e-12
Identities = 34/105 (32%), Positives = 53/105 (50%)
Frame = +1
Query: 481 LSQIKDFVSSVAVTITILQFLSGILVCKQYVVNRTTAEASPLPFICGVISAALWILYGLT 660
L + +S A+T TI F GI +C Q + S +PF+ GV+ + W+ YGL
Sbjct: 2 LEVVLQVLSISAITTTIALFFCGIPICMQIRRQGAVGDISGVPFLMGVLGGSFWLRYGLL 61
Query: 661 KHDNKIVFVNVIGVTLMFAYTAVFYIFTFKKSSVLKQIFAMVAFI 795
K D ++ VNV+GV M Y F I++ K + Q+ + + I
Sbjct: 62 KMDYVMIIVNVVGVACMAFYCVFFLIYSLPKKTFTCQLILVTSTI 106
>AL031633-6|CAA21014.3| 225|Caenorhabditis elegans Hypothetical
protein Y39A1A.8 protein.
Length = 225
Score = 63.7 bits (148), Expect = 3e-10
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Frame = +1
Query: 490 IKDFVSSVAVTITILQFLSGILVCKQYVVNRTTAEASPLPFICGVISAALWILYGLTKHD 669
I ++S A++ T+ FL G+ +C + ++ SP PF+ +S L+I YGL K D
Sbjct: 9 ILPYLSFTALSSTVAFFLCGLQICHRIKTRGSSEGTSPAPFLLSFLSCGLFIQYGLLKDD 68
Query: 670 NKIVFVNVIGVTLMFAYTAVFYIFTFKKSSVLKQIFAMVAFIIFTLGYVSVEDDNEXXXX 849
+ I + N IG L Y FY T + + K I + I + +V+ ++
Sbjct: 69 DVITYCNGIGCFLQACYLMYFYYMTRNRRFLNKVISIELGIIGIVVYWVAHSTNSHLTKT 128
Query: 850 XXXXXACSF-TLLTIASPL 903
C F + ++A+PL
Sbjct: 129 TYVGNYCIFLNICSVAAPL 147
Score = 34.3 bits (75), Expect = 0.19
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 571 VVNRTTAEASPLPFICGVISAAL-WILYGLTKHDNKIVFVNVIGVTLMFAYTAVFYIFTF 747
VV ++E+ PLP L W+ YG D I+ NVI + ++F I+
Sbjct: 153 VVRNKSSESLPLPLCVACFVVCLQWMFYGYIVDDIVILVPNVIATVISILQLSLFIIYPG 212
Query: 748 KKSSVLKQ 771
+ VL Q
Sbjct: 213 APAGVLPQ 220
>Z70306-1|CAA94322.1| 355|Caenorhabditis elegans Hypothetical
protein C06G8.1 protein.
Length = 355
Score = 57.6 bits (133), Expect = 2e-08
Identities = 28/97 (28%), Positives = 48/97 (49%)
Frame = +1
Query: 496 DFVSSVAVTITILQFLSGILVCKQYVVNRTTAEASPLPFICGVISAALWILYGLTKHDNK 675
+ +S +A T+ F GI +C+Q + T E S PF+ GV+ W+ YG K+D
Sbjct: 13 NLLSILAFFTTVGLFFCGIPICRQIWKRKDTKEISGAPFLMGVVGGCCWMTYGWLKNDGT 72
Query: 676 IVFVNVIGVTLMFAYTAVFYIFTFKKSSVLKQIFAMV 786
+ +V V L YT ++ T KK + ++ ++
Sbjct: 73 VKWVTGCQVILYTTYTIFYWCMTKKKLYISLKVLGVI 109
Score = 41.1 bits (92), Expect = 0.002
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +1
Query: 511 VAVTITILQF---LSGILVCKQYVVNRTTAEASPLPF-ICGVISAALWILYGLTKHDNKI 678
V +T+ I F L GI V V+ R PLP I + + W LYGL K+D +
Sbjct: 133 VCLTLNIADFAAPLGGIRV----VIRRWATSTLPLPLCIANFLVSTEWFLYGLLKNDFYL 188
Query: 679 VFVNVIGVTLMFAYTAVFYIFTFK 750
+F N +G L F +F + K
Sbjct: 189 IFPNGVGSLLAFIQLLLFIVLPRK 212
>Z70755-4|CAA94783.2| 239|Caenorhabditis elegans Hypothetical
protein K06A4.4 protein.
Length = 239
Score = 51.6 bits (118), Expect = 1e-06
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Frame = +1
Query: 499 FVSSVAVTITILQFLSGILVCKQYVVNRTTAEASPLPFICGVISAALWILYGLTKHDNKI 678
F++S A+ L S + ++V +++ +P+P+IC VI +ALW+ Y + D K+
Sbjct: 26 FLTSTALHAVAL-ITSPVQAVHKWVRRQSSDSDTPIPYICAVIGSALWLRYSIFLRDTKL 84
Query: 679 VFVNVIGVT--LMFAYTAVFYIFTFKK-SSVLKQIFAMVAFIIFTLGYVSVEDDNE 837
+ + V+ L F +FY +K ++ I A ++ + +G ++ ED E
Sbjct: 85 ILLQTYAVSMQLFFVIALIFYRTKRRKLIRLMTGIAAALSLLFLYIGNMNDEDGKE 140
>AF016447-9|AAG24009.1| 233|Caenorhabditis elegans Hypothetical
protein C54F6.4 protein.
Length = 233
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/84 (22%), Positives = 39/84 (46%)
Frame = +1
Query: 556 VCKQYVVNRTTAEASPLPFICGVISAALWILYGLTKHDNKIVFVNVIGVTLMFAYTAVFY 735
+C Q + S PF+ G + W+ YG ++D ++ +N G+ + + A+F+
Sbjct: 17 ICLQIYRQGHVGDISGFPFLMGTLVLPFWLRYGFLRNDVMLISINCAGIPIA-VFNAMFF 75
Query: 736 IFTFKKSSVLKQIFAMVAFIIFTL 807
++ K ++V II T+
Sbjct: 76 LYFSKPKKYYMTQLSIVTIIILTM 99
Score = 36.3 bits (80), Expect = 0.046
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Frame = +1
Query: 454 IFNRINKMHLSQIKDFVSSVAVTITILQFLSGILVCKQYVVNRTTAEASPLPFI-CGV-- 624
I + +H + F+ V + + ++ F S + + + +R E LPF+ C V
Sbjct: 96 ILTMLMLIHFNPNVQFLGFVCIVLNLITFGSPLAGLRVVLRDR---EVITLPFVLCLVQL 152
Query: 625 ISAALWILYGLTKHDNKIVFVNVIGVTLMFAYTAVFYIFTFKK 753
I LW LYG+ D +V +G+ + ++F IF K+
Sbjct: 153 IVQCLWNLYGILIQDFFLVIPTAVGIMISLVQLSLFLIFPRKR 195
>AF003142-3|AAB54188.1| 739|Caenorhabditis elegans Him-three
paralog protein 3 protein.
Length = 739
Score = 32.7 bits (71), Expect = 0.57
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -1
Query: 175 RPNGKQSTXPKTRHYGSSRSINGVXRXHKHRXPSSSNPALATKXSTGRCKDXL 17
+P G S RHYG SI V PS + PA+AT+ GR L
Sbjct: 637 QPAGAASVIAAERHYGRVSSILDVAGSFADVDPSGAAPAIATERHYGRVSSIL 689
>U40953-2|AAB52647.1| 483|Caenorhabditis elegans Hypothetical
protein F53B1.2 protein.
Length = 483
Score = 30.3 bits (65), Expect = 3.0
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -3
Query: 473 LFILLNIHSYHYVFL*TVLIYFEICSTMLQCFSPMSIEHAGVTHTPRRVMTY 318
+F++L H ++ + V I F I S M + + HAG+T T R+ T+
Sbjct: 364 IFLILAAHEHYSI---DVFIAFYISSRMFLYYHAYAYNHAGITATDYRMRTW 412
>Z68760-5|CAE17823.1| 161|Caenorhabditis elegans Hypothetical
protein F36H1.10 protein.
Length = 161
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +1
Query: 613 ICGVISAALWILYGLTKHDNKIVFVNVIGVTLMFAYTAVFYIFTFKKSSVL---KQIFAM 783
ICG+I W + N + + T FA+ ++ + K+ ++L Q F +
Sbjct: 17 ICGIIIGLFWACVYIFAWKNWVALAACLTAT-AFAFETFYFYLSVKRDTILNWKSQTFQV 75
Query: 784 VAFIIFTLGYVSV 822
+ +I +G++S+
Sbjct: 76 LFWINLIVGFLSI 88
>U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated
protein 104, isoforma protein.
Length = 1584
Score = 29.5 bits (63), Expect = 5.3
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -1
Query: 214 GTWXFMMTWNRSCRPNGKQSTXPKTRHYGSSRSINGVXRXHKHRXPSSS 68
G M N SC NGKQ T P H G SR I G ++ P +
Sbjct: 521 GNVTLTMKPNASCYINGKQVTTPTVLHTG-SRVILGEHHVFRYNDPQEA 568
>U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated
protein 104, isoformb protein.
Length = 1628
Score = 29.5 bits (63), Expect = 5.3
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -1
Query: 214 GTWXFMMTWNRSCRPNGKQSTXPKTRHYGSSRSINGVXRXHKHRXPSSS 68
G M N SC NGKQ T P H G SR I G ++ P +
Sbjct: 521 GNVTLTMKPNASCYINGKQVTTPTVLHTG-SRVILGEHHVFRYNDPQEA 568
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 708 ERHTNYIDKHNFIVMFSKSIQYPESGRY 625
ERHT Y D+ F M +Q ++GRY
Sbjct: 592 ERHTFYSDEDGFFAMTIDPVQVTDTGRY 619
>M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related
protein protein.
Length = 1584
Score = 29.5 bits (63), Expect = 5.3
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -1
Query: 214 GTWXFMMTWNRSCRPNGKQSTXPKTRHYGSSRSINGVXRXHKHRXPSSS 68
G M N SC NGKQ T P H G SR I G ++ P +
Sbjct: 521 GNVTLTMKPNASCYINGKQVTTPTVLHTG-SRVILGEHHVFRYNDPQEA 568
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 708 ERHTNYIDKHNFIVMFSKSIQYPESGRY 625
ERHT Y D+ F M +Q ++GRY
Sbjct: 592 ERHTFYSDEDGFFAMTIDPVQVTDTGRY 619
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 708 ERHTNYIDKHNFIVMFSKSIQYPESGRY 625
ERHT Y D+ F M +Q ++GRY
Sbjct: 592 ERHTFYSDEDGFFAMTIDPVQVTDTGRY 619
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 708 ERHTNYIDKHNFIVMFSKSIQYPESGRY 625
ERHT Y D+ F M +Q ++GRY
Sbjct: 592 ERHTFYSDEDGFFAMTIDPVQVTDTGRY 619
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 708 ERHTNYIDKHNFIVMFSKSIQYPESGRY 625
ERHT Y D+ F M +Q ++GRY
Sbjct: 592 ERHTFYSDEDGFFAMTIDPVQVTDTGRY 619
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 708 ERHTNYIDKHNFIVMFSKSIQYPESGRY 625
ERHT Y D+ F M +Q ++GRY
Sbjct: 592 ERHTFYSDEDGFFAMTIDPVQVTDTGRY 619
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 29.1 bits (62), Expect = 7.0
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = -1
Query: 217 SGTWXFMMTWNRSCRPNGKQSTXPKTRHYGSSRSINGVXRXHKHRXPSSSNPALATKXST 38
SG+W F +T ++ + P+ +H+ + S +G H H PS+S ++ +
Sbjct: 808 SGSWPFSLTKTQT------SPSRPEGQHFFPADSQDGPGPSHSHHDPSTSGTTMSATTTP 861
Query: 37 G 35
G
Sbjct: 862 G 862
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,118,037
Number of Sequences: 27780
Number of extensions: 510655
Number of successful extensions: 1176
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3526846804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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