Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_B07
(1261 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P19404 Cluster: NADH dehydrogenase [ubiquinone] flavopr... 318 1e-85
UniRef50_Q9UUT9 Cluster: Subunit NUHM of protein NADH:Ubiquinone... 229 1e-58
UniRef50_Q54F10 Cluster: NADH dehydrogenase; n=1; Dictyostelium ... 223 8e-57
UniRef50_Q9VVF0 Cluster: CG6485-PA; n=2; Sophophora|Rep: CG6485-... 222 1e-56
UniRef50_Q5ACX6 Cluster: Potential mitochondrial Complex I, NUHM... 221 3e-56
UniRef50_Q2TZN8 Cluster: NADH:ubiquinone oxidoreductase; n=11; P... 219 2e-55
UniRef50_O22769 Cluster: NADH-ubiquinone oxidoreductase 24 kDa s... 212 2e-53
UniRef50_Q6V9B3 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 203 9e-51
UniRef50_Q0BSK6 Cluster: NADH-quinone oxidoreductase chain E; n=... 200 5e-50
UniRef50_A0E600 Cluster: Chromosome undetermined scaffold_8, who... 196 1e-48
UniRef50_Q00RX3 Cluster: Putative NADH-ubiquinone oxidoreductase... 195 2e-48
UniRef50_Q4UM09 Cluster: NADH-quinone oxidoreductase subunit E; ... 193 9e-48
UniRef50_Q2GDD2 Cluster: NADH dehydrogenase I, E subunit; n=1; N... 190 9e-47
UniRef50_Q1GTK2 Cluster: NADH-quinone oxidoreductase, E subunit;... 188 3e-46
UniRef50_Q5DLW2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kD... 184 3e-45
UniRef50_A5NY87 Cluster: NADH-quinone oxidoreductase, E subunit;... 182 2e-44
UniRef50_Q4QEG7 Cluster: NADH-ubiquinone oxidoreductase, mitocho... 182 2e-44
UniRef50_A3U1M2 Cluster: ATP synthase subunit E; n=9; Alphaprote... 181 3e-44
UniRef50_A5CES4 Cluster: NADH dehydrogenase I chain E; n=1; Orie... 173 1e-41
UniRef50_Q5FGV2 Cluster: NADH-quinone oxidoreductase chain E; n=... 171 2e-41
UniRef50_P29914 Cluster: NADH-quinone oxidoreductase chain 2; n=... 169 1e-40
UniRef50_Q8G1B3 Cluster: NADH dehydrogenase I, E subunit; n=9; R... 168 3e-40
UniRef50_A7DLV4 Cluster: NADH-quinone oxidoreductase, E subunit;... 165 2e-39
UniRef50_Q98KQ9 Cluster: NADH-ubiquinone dehydrogenase chain E 1... 161 3e-38
UniRef50_P56909 Cluster: NADH-quinone oxidoreductase subunit E 1... 158 3e-37
UniRef50_A3UCV4 Cluster: ATP synthase subunit E; n=4; Alphaprote... 155 3e-36
UniRef50_Q83BQ9 Cluster: NADH dehydrogenase I, E subunit; n=3; C... 142 2e-32
UniRef50_Q11VB6 Cluster: NADH dehydrogenase I chain E; n=2; Bact... 140 7e-32
UniRef50_A2F771 Cluster: Respiratory-chain NADH dehydrogenase 24... 135 2e-30
UniRef50_A6H1R0 Cluster: NADH dehydrogenase I, E subunit; n=2; B... 130 1e-28
UniRef50_P56910 Cluster: NADH-quinone oxidoreductase subunit E 2... 124 4e-27
UniRef50_Q6MIR6 Cluster: NADH dehydrogenase I chain E; n=1; Bdel... 124 5e-27
UniRef50_Q2LQE7 Cluster: NADH-quinone oxidoreductase chain F; n=... 123 8e-27
UniRef50_A1AVR6 Cluster: NADH-quinone oxidoreductase, E subunit;... 118 2e-25
UniRef50_A5UZH6 Cluster: NADH-quinone oxidoreductase, E subunit;... 117 6e-25
UniRef50_A7HLQ9 Cluster: NADH-quinone oxidoreductase, E subunit;... 116 1e-24
UniRef50_Q9PGJ1 Cluster: NADH-ubiquinone oxidoreductase, NQO2 su... 116 1e-24
UniRef50_Q0EZQ5 Cluster: NADH dehydrogenase I chain E; n=1; Mari... 115 3e-24
UniRef50_A6FCN2 Cluster: NuoE2 NADH I CHAIN E; n=1; Moritella sp... 111 3e-23
UniRef50_Q02CT9 Cluster: NADH-quinone oxidoreductase, E subunit;... 111 4e-23
UniRef50_A1WXW3 Cluster: NADH-quinone oxidoreductase, E subunit;... 110 8e-23
UniRef50_Q9S5X7 Cluster: Fe-hydrogenase, subunit gamma; n=5; The... 109 2e-22
UniRef50_A7HII1 Cluster: NADH-quinone oxidoreductase, E subunit;... 109 2e-22
UniRef50_Q6A6G2 Cluster: NADH dehydrogenase I chain E; n=1; Prop... 107 5e-22
UniRef50_Q2JFL6 Cluster: NADH-quinone oxidoreductase, E subunit;... 107 5e-22
UniRef50_A4SXP9 Cluster: NADH-quinone oxidoreductase, E subunit;... 107 8e-22
UniRef50_Q0C8X0 Cluster: Putative uncharacterized protein; n=1; ... 107 8e-22
UniRef50_Q9RU91 Cluster: NADH dehydrogenase I, E subunit; n=2; D... 106 1e-21
UniRef50_Q0AZ71 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 106 1e-21
UniRef50_Q82TU7 Cluster: Respiratory-chain NADH dehydrogenase 24... 105 2e-21
UniRef50_Q8ABI7 Cluster: NADH-ubiquinone oxidoreductase subunit;... 104 4e-21
UniRef50_A7CUG1 Cluster: NADH-quinone oxidoreductase, E subunit;... 104 4e-21
UniRef50_A0UV12 Cluster: NADH-quinone oxidoreductase, E subunit;... 104 4e-21
UniRef50_Q092T1 Cluster: NADH-ubiquinone oxidoreductase 24 kDa s... 104 6e-21
UniRef50_A4J528 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 103 7e-21
UniRef50_Q67P18 Cluster: NADH dehydrogenase I subunit E; n=1; Sy... 103 1e-20
UniRef50_Q8RBD2 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 101 3e-20
UniRef50_A3ERJ3 Cluster: NADH ubiquinone oxidoreductase 24 kD su... 101 3e-20
UniRef50_Q1EVZ9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 101 4e-20
UniRef50_Q5JIQ1 Cluster: NADH:ubiquinone oxidoreductase, subunit... 101 4e-20
UniRef50_A6PRE1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 100 7e-20
UniRef50_Q6MDR2 Cluster: Putative NADH-ubiquinone oxidoreductase... 100 9e-20
UniRef50_Q9WXM7 Cluster: NADP-reducing hydrogenase, subunit A; n... 99 1e-19
UniRef50_Q1IS36 Cluster: NADH-quinone oxidoreductase, E subunit;... 99 1e-19
UniRef50_A3THI9 Cluster: ATP synthase subunit E; n=3; Actinomyce... 99 2e-19
UniRef50_A4J9N9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 99 3e-19
UniRef50_A1HP41 Cluster: NADH-quinone oxidoreductase, E subunit;... 98 4e-19
UniRef50_P65574 Cluster: NADH-quinone oxidoreductase subunit E; ... 98 4e-19
UniRef50_P0AFD3 Cluster: NADH-quinone oxidoreductase subunit E; ... 98 5e-19
UniRef50_O66842 Cluster: NADH-quinone oxidoreductase subunit E; ... 97 6e-19
UniRef50_Q3ZXM4 Cluster: Hydrogenase subunit HymA; n=13; cellula... 96 2e-18
UniRef50_Q2LYE8 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 95 3e-18
UniRef50_Q1PYY2 Cluster: Similar to nuoE subunit of the NADH:ubi... 95 3e-18
UniRef50_Q2RHR8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 94 6e-18
UniRef50_Q1PWG7 Cluster: Similar to to proton-translocating NADH... 94 8e-18
UniRef50_A5D2H5 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 93 1e-17
UniRef50_Q746S5 Cluster: NADH dehydrogenase I, E subunit; n=4; D... 93 1e-17
UniRef50_Q67JG1 Cluster: Putative iron hydrogenase small subunit... 93 2e-17
UniRef50_Q1PW48 Cluster: Similar to NADH:ubiquinone oxidoreducta... 93 2e-17
UniRef50_A1ALP3 Cluster: NADH-quinone oxidoreductase, E subunit;... 92 3e-17
UniRef50_Q3A461 Cluster: NADP-reducing hydrogenase chain A; n=5;... 91 7e-17
UniRef50_Q2AG84 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 90 1e-16
UniRef50_A0LJN9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 90 1e-16
UniRef50_Q0AVX7 Cluster: Fe-hydrogenase, gamma subunit; n=4; Syn... 89 2e-16
UniRef50_Q89AU3 Cluster: NADH-quinone oxidoreductase subunit E; ... 89 2e-16
UniRef50_A0LLS9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 89 3e-16
UniRef50_Q3A640 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 88 4e-16
UniRef50_Q6SGN4 Cluster: NADH-quinone oxidoreductase, E subunit;... 88 5e-16
UniRef50_Q0AWA4 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 88 5e-16
UniRef50_A5FSK9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 87 7e-16
UniRef50_O27591 Cluster: NADP-reducing hydrogenase, subunit A; n... 87 9e-16
UniRef50_Q0PIE2 Cluster: NAD(P)H-quinone oxidoreductase 24 kDa s... 86 2e-15
UniRef50_Q608Y0 Cluster: NADH dehydrogenase I, E subunit; n=5; B... 85 3e-15
UniRef50_Q7NZH7 Cluster: NADH-ubiquinone oxidoreductase, chain E... 85 4e-15
UniRef50_A4M6K3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 85 4e-15
UniRef50_A0UVM6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 85 4e-15
UniRef50_Q6FE68 Cluster: NADH dehydrogenase I chain E; n=5; Mora... 85 5e-15
UniRef50_Q2S5I9 Cluster: NADH-ubiquinone oxidoreductase 24 kDa s... 85 5e-15
UniRef50_Q4AHT8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 85 5e-15
UniRef50_A0J5R7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 85 5e-15
UniRef50_A6PPY8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 84 6e-15
UniRef50_Q74GA4 Cluster: NADH dehydrogenase I, E subunit; n=6; G... 83 1e-14
UniRef50_Q8YYU5 Cluster: NADH dehydrogenase I chain E; n=4; Bact... 82 3e-14
UniRef50_A3DCI7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 81 4e-14
UniRef50_A5UZ48 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 81 6e-14
UniRef50_A5FS13 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 81 6e-14
UniRef50_Q2C5T5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 81 8e-14
UniRef50_A0LGJ1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 81 8e-14
UniRef50_Q835I9 Cluster: NAD-dependent formate dehydrogenase, ga... 80 1e-13
UniRef50_Q4AMU5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 80 1e-13
UniRef50_Q0PQQ4 Cluster: NADH dehydrogenase I E subunit; n=1; En... 80 1e-13
UniRef50_Q01WJ0 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 80 1e-13
UniRef50_Q1NQY7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 79 2e-13
UniRef50_A3ETZ6 Cluster: NADH ubiquinone oxidoreductase; n=1; Le... 79 2e-13
UniRef50_Q2LS97 Cluster: NADH-quinone oxidoreductase chain F; n=... 79 3e-13
UniRef50_A7IL17 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa ... 78 4e-13
UniRef50_Q47WZ1 Cluster: Formate dehydrogenase, gamma subunit; n... 77 1e-12
UniRef50_A0RMD2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kD... 77 1e-12
UniRef50_Q749M0 Cluster: NAD-reducing hydrogenase, putative; n=4... 77 1e-12
UniRef50_Q2FP98 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 77 1e-12
UniRef50_Q6N1Z1 Cluster: NADH-ubiquinone dehydrogenase chain E; ... 76 2e-12
UniRef50_A1FMP2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 75 4e-12
UniRef50_A6PMG8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 73 2e-11
UniRef50_Q608U6 Cluster: Formate dehydrogenase, gamma subunit; n... 73 2e-11
UniRef50_Q5BT40 Cluster: SJCHGC02806 protein; n=1; Schistosoma j... 71 5e-11
UniRef50_A3Z0U6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 70 1e-10
UniRef50_A3YBB2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 70 1e-10
UniRef50_UPI0000E87F9D Cluster: ATP synthase subunit E; n=1; Met... 70 1e-10
UniRef50_O13691 Cluster: Probable NADH-ubiquinone oxidoreductase... 70 1e-10
UniRef50_Q98BW7 Cluster: NAD-dependent formate dehydrogenase gam... 69 2e-10
UniRef50_A3JB74 Cluster: ATP synthase subunit E; n=1; Marinobact... 69 2e-10
UniRef50_A1AP34 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 69 3e-10
UniRef50_Q483I3 Cluster: Formate dehydrogenase, gamma subunit; n... 69 3e-10
UniRef50_A5V6C3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 68 6e-10
UniRef50_A0QNT7 Cluster: Formate dehydrogenase, gamma subunit; n... 68 6e-10
UniRef50_Q057X2 Cluster: NADH dehydrogenase I chain E; n=1; Buch... 67 1e-09
UniRef50_Q8NK93 Cluster: NADH-ubiquinone oxidoreductase 24kDa su... 66 2e-09
UniRef50_Q89QJ0 Cluster: NADH dehydrogenase I chain E; n=16; Alp... 64 6e-09
UniRef50_A6VXL9 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa ... 64 1e-08
UniRef50_Q28P85 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa ... 61 7e-08
UniRef50_A4XP94 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 61 7e-08
UniRef50_Q63RZ3 Cluster: NAD-dependent formate dehydrogenase gam... 60 9e-08
UniRef50_A0NMW4 Cluster: NADH:ubiquinone oxidoreductase, NADH-bi... 60 2e-07
UniRef50_Q47HE6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 56 1e-06
UniRef50_Q0AL75 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 55 3e-06
UniRef50_Q9ZBV8 Cluster: Putative respiratory chain oxidoreducta... 54 6e-06
UniRef50_Q1VMJ2 Cluster: Formate dehydrogenase, beta subunit; n=... 53 2e-05
UniRef50_A0K164 Cluster: NADH dehydrogenase; n=2; Actinomycetale... 52 3e-05
UniRef50_A0Z690 Cluster: Formate dehydrogenase subunit gamma; n=... 48 7e-04
UniRef50_Q603S6 Cluster: NAD-reducing hydrogenase, alpha subunit... 46 0.002
UniRef50_A1WBG0 Cluster: NADH dehydrogenase (Quinone) precursor;... 45 0.004
UniRef50_Q5P4U3 Cluster: Formate dehydrogenase, NAD(P) reducing,... 45 0.005
UniRef50_Q2AG56 Cluster: NADH dehydrogenase I chain G; n=1; Halo... 43 0.015
UniRef50_A6GJI0 Cluster: Putative NADH dehydrogenase I chain F; ... 43 0.015
UniRef50_A1SU84 Cluster: Hydrogenase, NADP-reducing subunit C; n... 42 0.034
UniRef50_Q5UYB6 Cluster: Colbalt chelase thioredoxin; n=6; Halob... 42 0.034
UniRef50_Q04NF7 Cluster: Ferredoxin related-protein; n=4; Leptos... 42 0.044
UniRef50_O96948 Cluster: Hydrogenase; n=14; Eukaryota|Rep: Hydro... 40 0.18
UniRef50_A5KR35 Cluster: Putative uncharacterized protein; n=1; ... 39 0.31
UniRef50_Q8KX55 Cluster: Ferredoxin PetF2; n=1; Synechococcus sp... 36 1.7
UniRef50_A6PNR9 Cluster: Putative uncharacterized protein precur... 36 1.7
UniRef50_Q2AG82 Cluster: Ferredoxin:4Fe-4S ferredoxin, iron-sulf... 36 2.2
UniRef50_A7HJV1 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 36 2.2
UniRef50_Q2Z141 Cluster: Putative ATP-dependent DNA helicase; n=... 36 2.2
UniRef50_A7PC77 Cluster: Chromosome chr2 scaffold_11, whole geno... 36 2.9
UniRef50_A2Y635 Cluster: Putative uncharacterized protein; n=2; ... 36 2.9
UniRef50_A0UUV1 Cluster: Putative uncharacterized protein; n=1; ... 35 3.9
UniRef50_A5ALP4 Cluster: Putative uncharacterized protein; n=1; ... 35 5.1
UniRef50_UPI00003C0AF2 Cluster: PREDICTED: similar to Bone morph... 34 6.7
UniRef50_Q60C55 Cluster: Ferredoxin, 2Fe-2S; n=4; Proteobacteria... 34 6.7
UniRef50_Q0LHA0 Cluster: Peptidase S9, prolyl oligopeptidase act... 34 6.7
UniRef50_A7S5S7 Cluster: Predicted protein; n=2; Nematostella ve... 34 6.7
UniRef50_A6F4P8 Cluster: Putative uncharacterized protein; n=1; ... 34 8.9
UniRef50_P15799 Cluster: Surface antigen CRP170; n=46; Giardia|R... 34 8.9
>UniRef50_P19404 Cluster: NADH dehydrogenase [ubiquinone]
flavoprotein 2, mitochondrial precursor; n=64; cellular
organisms|Rep: NADH dehydrogenase [ubiquinone]
flavoprotein 2, mitochondrial precursor - Homo sapiens
(Human)
Length = 249
Score = 318 bits (782), Expect = 1e-85
Identities = 147/244 (60%), Positives = 187/244 (76%), Gaps = 2/244 (0%)
Frame = +2
Query: 113 LSSLRTGVQGLWRISSRSIQTTASRQH--DSLFVHRDTPEDNPSIPFEFSQANQKRVEAL 286
L + G+ W R++ T + +LFVHRDTPE+NP PF+F+ N KR+EA+
Sbjct: 7 LRARAAGLTAHWGRHVRNLHKTVMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66
Query: 287 LAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 466
+ YPEGHK A++P+LDLAQRQ+G WLPISAM+KVAE+L +P MRVYEVATFYTM+ R+
Sbjct: 67 VKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRK 125
Query: 467 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPM 646
P+GKYH+QVCTTTPC LR SD+IL AI+++ +VG +P F++ EVECLGACVNAPM
Sbjct: 126 PVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPM 185
Query: 647 IQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSLTEEPTGPGFGV 826
+Q+ND+YYEDL+ +D +EII +LK + PKPGPRSGRF+ EP GGLTSLTE P GPGFGV
Sbjct: 186 VQINDNYYEDLTAKDIEEIIDELKAGKIPKPGPRSGRFSCEPAGGLTSLTEPPKGPGFGV 245
Query: 827 QDAL 838
Q L
Sbjct: 246 QAGL 249
>UniRef50_Q9UUT9 Cluster: Subunit NUHM of protein NADH:Ubiquinone
Oxidoreductase; n=3; Fungi/Metazoa group|Rep: Subunit
NUHM of protein NADH:Ubiquinone Oxidoreductase -
Yarrowia lipolytica (Candida lipolytica)
Length = 243
Score = 229 bits (560), Expect = 1e-58
Identities = 115/234 (49%), Positives = 158/234 (67%), Gaps = 2/234 (0%)
Frame = +2
Query: 110 MLSSLRTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEALL 289
ML +R + L R ++R+ Q +R H + VHR+T +NPSIPFEFS N KR E ++
Sbjct: 1 MLRLIRPRLAALARPTTRAPQALNARTH-IVSVHRNTENNNPSIPFEFSPENMKRAEEVI 59
Query: 290 AIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRP 469
A YP +K+ A++PLLD+ QRQ G + IS M+ VA++L +P MRVYEVATFYTM+ R P
Sbjct: 60 AKYPPQYKKAAVMPLLDIGQRQLG-YTSISVMNYVAKLLEMPPMRVYEVATFYTMYNRTP 118
Query: 470 IGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMI 649
+G+YH+Q+CTTTPC L GSD I+ A++ N + G + F++SEVECLGACVNAPM+
Sbjct: 119 MGRYHLQICTTTPCQLCGSDGIMEAVQNTLNIKPGETTKDNLFTLSEVECLGACVNAPMM 178
Query: 650 QVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRSG-RFASEPLGG-LTSLTEEP 805
+NDDYYEDL+ E T +++ K + P PGP + R EP G L++EP
Sbjct: 179 AINDDYYEDLTPEGTVKLLEDCKAGKMPTPGPENHVRRDCEPASGQKVLLSKEP 232
>UniRef50_Q54F10 Cluster: NADH dehydrogenase; n=1; Dictyostelium
discoideum AX4|Rep: NADH dehydrogenase - Dictyostelium
discoideum AX4
Length = 247
Score = 223 bits (545), Expect = 8e-57
Identities = 107/215 (49%), Positives = 147/215 (68%)
Frame = +2
Query: 170 QTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQ 349
Q+T +R D+L H +T ++N PF+F+Q N +VE +LA YP+ +++ A+IPLLDLAQ
Sbjct: 28 QSTLTRS-DALSRHVETEDNNEHTPFDFTQENLVKVEKILAKYPKQYRQSALIPLLDLAQ 86
Query: 350 RQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 529
RQ+GGW+ + AM KVA I + M YEVA+FYTMF R IG+ VQVCTTTPC LRGS
Sbjct: 87 RQNGGWISLRAMDKVAHICGIAPMTAYEVASFYTMFNRTKIGENFVQVCTTTPCMLRGSG 146
Query: 530 AILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIIS 709
I+ K +VG +P KF++ EVECLGACVNAPM+ +NDD+YEDL+ T ++
Sbjct: 147 EIIKTCKSHLGIQVGETTPDNKFTLVEVECLGACVNAPMMCINDDFYEDLTSASTINLLD 206
Query: 710 KLKKDEKPKPGPRSGRFASEPLGGLTSLTEEPTGP 814
++K ++ K GP++ R A+E G T+L E P GP
Sbjct: 207 QIKNNKPTKIGPQTHRKAAEGPQGKTTLLEPPVGP 241
>UniRef50_Q9VVF0 Cluster: CG6485-PA; n=2; Sophophora|Rep: CG6485-PA
- Drosophila melanogaster (Fruit fly)
Length = 238
Score = 222 bits (543), Expect = 1e-56
Identities = 106/202 (52%), Positives = 139/202 (68%)
Frame = +2
Query: 224 EDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEI 403
E ++ FEFS+ NQ+RV+ALLA YP+ +GA++PLLD+AQRQ G WL ISA+ VAE
Sbjct: 27 EIRKALKFEFSKDNQRRVKALLAWYPQAEWKGALLPLLDIAQRQQG-WLSISAVQAVAET 85
Query: 404 LNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNS 583
+ + M +E A FYTMF +P GKY V VCT+TPC LRG D I A K+ N E G +
Sbjct: 86 IKIDPMEAFEAAQFYTMFFMKPRGKYVVSVCTSTPCKLRGGDEIFEACKKTLNLEHGQTT 145
Query: 584 PCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFA 763
P +F++ E C+GACVNAP++ VNDD YEDL + I++ L+ D+ P GPR+GRFA
Sbjct: 146 PDMQFTLKEDYCMGACVNAPVLAVNDDMYEDLDEKSLANILADLRNDKLPPAGPRNGRFA 205
Query: 764 SEPLGGLTSLTEEPTGPGFGVQ 829
SEP GGLT+L +P PGF +Q
Sbjct: 206 SEPKGGLTTLKIQPPPPGFMMQ 227
>UniRef50_Q5ACX6 Cluster: Potential mitochondrial Complex I,
NUHM_24kd subunit; n=5; Saccharomycetales|Rep: Potential
mitochondrial Complex I, NUHM_24kd subunit - Candida
albicans (Yeast)
Length = 243
Score = 221 bits (540), Expect = 3e-56
Identities = 113/215 (52%), Positives = 152/215 (70%), Gaps = 4/215 (1%)
Frame = +2
Query: 173 TTASRQHDSLF-VHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQ 349
+T S+++ S+ VHRDT EDNP+I FEF+ N+KR E ++A YP +K+GA +PLLDL Q
Sbjct: 19 STVSKRYSSIISVHRDTKEDNPNIAFEFNSENKKRAEEIIAKYPPQYKKGACMPLLDLGQ 78
Query: 350 RQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 529
RQ G + IS M+ VA++L++P MRVYEVATFYTM+ R P+GKY++QVCTTTPC L GSD
Sbjct: 79 RQLG-FTSISVMNYVAKLLDMPPMRVYEVATFYTMYNRHPMGKYNLQVCTTTPCQLCGSD 137
Query: 530 AILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIIS 709
+I+ AI + G +P F++ EVECLGACVNAPMI +NDDY+EDLS E T ++
Sbjct: 138 SIMKAITDYLKIKPGQTTPDKLFTLQEVECLGACVNAPMIAINDDYHEDLSPEATINLLK 197
Query: 710 KLKK-DEKPKPGPRSG-RFASEPLGG-LTSLTEEP 805
+L++ E + GP G R + EP G L +EP
Sbjct: 198 QLQEGKELTEIGPVDGKRQSCEPFSGPKVLLNKEP 232
>UniRef50_Q2TZN8 Cluster: NADH:ubiquinone oxidoreductase; n=11;
Pezizomycotina|Rep: NADH:ubiquinone oxidoreductase -
Aspergillus oryzae
Length = 270
Score = 219 bits (534), Expect = 2e-55
Identities = 112/223 (50%), Positives = 146/223 (65%), Gaps = 12/223 (5%)
Frame = +2
Query: 161 RSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLD 340
R R DSL VHR+ P +NPSIPF F++ NQ+ ++ +L YP +K+ A++PLLD
Sbjct: 26 RPFSAGPQRCSDSLSVHRNKPTNNPSIPFTFNEQNQRLIDEILKRYPPQYKKAAVMPLLD 85
Query: 341 LAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLR 520
L QRQ G + IS M++VA +L +P MRVYEVATFYTM+ R P+GKY VQ+CTTTPC L
Sbjct: 86 LGQRQHG-FTSISVMNEVARLLEMPPMRVYEVATFYTMYNREPVGKYFVQLCTTTPCQLG 144
Query: 521 --GSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDT 694
GS IL AI++ G + G F++ EVECLGACVNAPM+Q+NDDYYEDL+ E
Sbjct: 145 GCGSTKILEAIQEHLGITPGHTTEDGLFTLLEVECLGACVNAPMVQINDDYYEDLTPESM 204
Query: 695 KEIISKLKKD----------EKPKPGPRSGRFASEPLGGLTSL 793
K +++ LK+ + P PGP SGR E GLT+L
Sbjct: 205 KTLLTALKESATATDAGKTVQIPAPGPMSGRNTCENSAGLTNL 247
>UniRef50_O22769 Cluster: NADH-ubiquinone oxidoreductase 24 kDa
subunit, mitochondrial precursor; n=8;
Viridiplantae|Rep: NADH-ubiquinone oxidoreductase 24 kDa
subunit, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 255
Score = 212 bits (517), Expect = 2e-53
Identities = 106/224 (47%), Positives = 148/224 (66%), Gaps = 11/224 (4%)
Frame = +2
Query: 197 SLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPI 376
+L H D+P++ P +P+EFS+ANQ +V+ +L+ YP +K+ A+IPLLDLAQ+Q+GGWLP+
Sbjct: 31 ALNYHLDSPDNKPDLPWEFSEANQSKVKEILSYYPSNYKQSAVIPLLDLAQQQNGGWLPV 90
Query: 377 SAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQE 556
SAM+ VA+++ + +RVYEVATFY+MF R +GKYH+ VC TTPC +RGS I +A+
Sbjct: 91 SAMNAVAKVIEVAPIRVYEVATFYSMFNRAKVGKYHLLVCGTTPCMIRGSRDIESALLDH 150
Query: 557 TNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND----------DYYEDLSVEDTKEII 706
+ G + G FSV E+EC+G CVNAPMI V D +Y+ED++ E EI+
Sbjct: 151 LGVKRGEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYFEDVTPEKVVEIV 210
Query: 707 SKLKKDEKPKPGPRS-GRFASEPLGGLTSLTEEPTGPGFGVQDA 835
KL+K EKP G ++ R P GG +L EP P F DA
Sbjct: 211 EKLRKGEKPPHGTQNPKRIKCGPEGGNKTLLGEPKPPQFRDLDA 254
>UniRef50_Q6V9B3 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=2; cellular organisms|Rep: NADH:ubiquinone
oxidoreductase 24 kD subunit - Chlamydomonas reinhardtii
Length = 282
Score = 203 bits (495), Expect = 9e-51
Identities = 98/212 (46%), Positives = 141/212 (66%), Gaps = 10/212 (4%)
Frame = +2
Query: 179 ASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQS 358
A+ D +H+DTPE+N + FEFS+A K V ++A YP +K+ A+IP+LD+ Q+++
Sbjct: 41 ATNSTDIFNIHKDTPENNAATSFEFSEATLKVVNDIIARYPPNYKQSAIIPVLDVTQQEN 100
Query: 359 GGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAIL 538
GGWL ++AM++VA++L++ +RVYEVATFYTMF R IGKYHVQ+C TTPC L+GS I
Sbjct: 101 GGWLSLAAMNRVAKLLDMAPIRVYEVATFYTMFNRTKIGKYHVQICGTTPCRLQGSQKIE 160
Query: 539 NAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND----------DYYEDLSVE 688
AI + +G + G F++ E+EC+GACVNAPM+ + D YYEDL+ +
Sbjct: 161 EAITKHLGIGIGQTTQDGLFTLGEMECMGACVNAPMVAIADYTKGVSGFEYIYYEDLTPK 220
Query: 689 DTKEIISKLKKDEKPKPGPRSGRFASEPLGGL 784
D I+ +KK KPKPG + R +EP G +
Sbjct: 221 DIVNILDTIKKGGKPKPGSQY-RLKAEPAGAV 251
>UniRef50_Q0BSK6 Cluster: NADH-quinone oxidoreductase chain E; n=5;
Rhodospirillales|Rep: NADH-quinone oxidoreductase chain
E - Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 227
Score = 200 bits (489), Expect = 5e-50
Identities = 94/194 (48%), Positives = 133/194 (68%), Gaps = 6/194 (3%)
Frame = +2
Query: 245 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSG-----GWLPISAMHKVAEILN 409
F F +++R+E +LA YP + A++PLLDLAQRQ G W+P +AM ++A L
Sbjct: 20 FSFDVQSEQRIEIILAKYPPARRASAVMPLLDLAQRQMGRETGSAWIPRAAMDEIARRLG 79
Query: 410 LPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCE-VGGNSP 586
+ +RVYEVATFY M+ RP+G++H+Q+CTTTPCWLRGSD ++ A + T + G S
Sbjct: 80 MAPIRVYEVATFYFMYNTRPVGRHHLQLCTTTPCWLRGSDEVVAACRSATGIQGWGETSE 139
Query: 587 CGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFAS 766
G F+++EVECLGACVNAP++QV+DDYYED+ T ++ L++ E+P PG SGR S
Sbjct: 140 DGMFTMTEVECLGACVNAPILQVDDDYYEDMDGPRTLVLLEALRRGERPTPGSMSGRQNS 199
Query: 767 EPLGGLTSLTEEPT 808
P GG T+L + P+
Sbjct: 200 APEGGPTTLRDVPS 213
>UniRef50_A0E600 Cluster: Chromosome undetermined scaffold_8, whole
genome shotgun sequence; n=5; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_8, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 263
Score = 196 bits (478), Expect = 1e-48
Identities = 95/210 (45%), Positives = 147/210 (70%), Gaps = 2/210 (0%)
Frame = +2
Query: 170 QTTASRQHDSLFV-HRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLA 346
Q + ++ ++FV HR+ +++ S+PF+F+ N K++EA+LA +P K+ IPLL LA
Sbjct: 10 QRKSIQRFSNIFVAHRNRDDNSDSVPFDFTDENYKKIEAILAKFPSNEKKSGTIPLLMLA 69
Query: 347 QRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGS 526
Q+Q+ +L +SAM K+A+IL +P+M VYE A+FY+MF R +GK+H+QVC TTPC L GS
Sbjct: 70 QKQNNNFLSLSAMKKIAKILEIPEMDVYETASFYSMFNRERVGKFHLQVCGTTPCQLCGS 129
Query: 527 DAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY-YEDLSVEDTKEI 703
I+ I+Q+ N + G + G +++ EVECLGAC NAPM+QVN+++ YEDL+ E+T ++
Sbjct: 130 KDIIKTIEQKLNIKNGETTADGLYTLQEVECLGACANAPMMQVNNEWVYEDLTPENTLKL 189
Query: 704 ISKLKKDEKPKPGPRSGRFASEPLGGLTSL 793
+ L K+ K GP++GR +E G T+L
Sbjct: 190 LEDL-KNGTDKKGPQNGRKNAEGPQGRTTL 218
>UniRef50_Q00RX3 Cluster: Putative NADH-ubiquinone oxidoreductase;
n=1; Ostreococcus tauri|Rep: Putative NADH-ubiquinone
oxidoreductase - Ostreococcus tauri
Length = 265
Score = 195 bits (476), Expect = 2e-48
Identities = 99/223 (44%), Positives = 144/223 (64%), Gaps = 10/223 (4%)
Frame = +2
Query: 206 VHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAM 385
VHRD PEDN ++ + F + + +V+A+L YP +KR AMIPLLDLAQ+Q+ G L ++ M
Sbjct: 26 VHRDVPEDNSTMTWTFEASVRPKVDAILRRYPSNYKRSAMIPLLDLAQQQNKGHLTLAMM 85
Query: 386 HKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNC 565
+ +A++L + +RVYEVATFY+MF R+ +GK HV VC TTPC LRGS I A+++
Sbjct: 86 NHIADVLEVAPIRVYEVATFYSMFNRQKMGKLHVMVCGTTPCMLRGSREIEKALEEWMGV 145
Query: 566 EVGGNSPCGKFSVSEVECLGACVNAPMIQVND----------DYYEDLSVEDTKEIISKL 715
+ + CG F++ E+EC+G CVNAPMI V D +YYEDL+ + ++ L
Sbjct: 146 KKFETTACGTFTLGEMECMGCCVNAPMIAVADYRNGVEGYSYNYYEDLTPQTAVKVCEAL 205
Query: 716 KKDEKPKPGPRSGRFASEPLGGLTSLTEEPTGPGFGVQDALKA 844
K + P+ G + R +EP+ GLT+LT +P+GP D +KA
Sbjct: 206 KAGKSPRVGSQI-RDKAEPIKGLTTLTGDPSGPFSRDLDQIKA 247
>UniRef50_Q4UM09 Cluster: NADH-quinone oxidoreductase subunit E;
n=18; Alphaproteobacteria|Rep: NADH-quinone
oxidoreductase subunit E - Rickettsia felis (Rickettsia
azadi)
Length = 167
Score = 193 bits (470), Expect = 9e-48
Identities = 85/165 (51%), Positives = 117/165 (70%)
Frame = +2
Query: 236 SIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLP 415
S F F + N E ++ YP KR A++PLLDLAQRQ+GGWLP+ A+ VA +L +P
Sbjct: 2 STNFTFDKKNLNLAEDIIKKYPPHGKRSAILPLLDLAQRQNGGWLPVPAIEYVANMLEMP 61
Query: 416 KMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGK 595
MR YEVATFY+MF + +GKYH+QVCTTTPCWL GSD I+ +++ ++ + K
Sbjct: 62 YMRAYEVATFYSMFNLKRVGKYHIQVCTTTPCWLHGSDDIMKICEKKLGIKLKETTEDQK 121
Query: 596 FSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEK 730
F++SE+ECLGACVNAP++Q+NDDYYEDL+ E +++I + D K
Sbjct: 122 FTLSEIECLGACVNAPVVQINDDYYEDLTEEKMEKLIDEYSNDFK 166
>UniRef50_Q2GDD2 Cluster: NADH dehydrogenase I, E subunit; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: NADH
dehydrogenase I, E subunit - Neorickettsia sennetsu
(strain Miyayama)
Length = 181
Score = 190 bits (462), Expect = 9e-47
Identities = 83/158 (52%), Positives = 115/158 (72%)
Frame = +2
Query: 245 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 424
F FS+ N + V +LA YP KR A++PLL L QRQ W+PI+AM VA++L LP ++
Sbjct: 24 FCFSEENSREVARILAKYPASRKRSAVLPLLHLVQRQHENWIPIAAMDHVAQLLGLPVIK 83
Query: 425 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSV 604
VYEVA+FY+MF P+GK+ ++VC TTPCWLRGSD ++ A K+E +VG + KFS+
Sbjct: 84 VYEVASFYSMFNTAPVGKHTIRVCRTTPCWLRGSDCLIEAAKRELGIKVGHKTEDNKFSL 143
Query: 605 SEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLK 718
EVECLGACV+AP++Q+NDDY+E+L E++S+LK
Sbjct: 144 DEVECLGACVSAPVVQINDDYFENLDERSFLELLSRLK 181
>UniRef50_Q1GTK2 Cluster: NADH-quinone oxidoreductase, E subunit;
n=8; Alphaproteobacteria|Rep: NADH-quinone
oxidoreductase, E subunit - Sphingopyxis alaskensis
(Sphingomonas alaskensis)
Length = 222
Score = 188 bits (458), Expect = 3e-46
Identities = 93/192 (48%), Positives = 127/192 (66%), Gaps = 7/192 (3%)
Frame = +2
Query: 245 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSG------GWLPISAMHKVAEIL 406
F ++ N ++ +A++A YP G +R A++PLLDLAQRQ G GWLP+ + VA L
Sbjct: 20 FAWTAENAEKAKAVIARYPAGRQRSAVMPLLDLAQRQVGAETQTQGWLPVPVIEYVAAQL 79
Query: 407 NLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSP 586
++P +R YEVATFYTM+ P+G+YHVQVC TTPC LRGSD + A K + G +P
Sbjct: 80 DMPFIRAYEVATFYTMYNLAPVGRYHVQVCGTTPCLLRGSDDVTAACKNRGMVK-GKTTP 138
Query: 587 CGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRS-GRFA 763
G F++SEVEC+G C NAPM+Q+NDD YEDL + I+ +L ++PK G ++ R
Sbjct: 139 DGLFTLSEVECMGTCANAPMVQINDDNYEDLDYDSMTRILDELAAGKQPKTGTQNPRRHT 198
Query: 764 SEPLGGLTSLTE 799
SEP GG T+L E
Sbjct: 199 SEPEGGPTTLKE 210
>UniRef50_Q5DLW2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kDa
subunit; n=1; Nyctotherus ovalis|Rep: Hydrogenosomal
NADH dehydrogenase 24 kDa subunit - Nyctotherus ovalis
Length = 259
Score = 184 bits (449), Expect = 3e-45
Identities = 91/199 (45%), Positives = 133/199 (66%), Gaps = 3/199 (1%)
Frame = +2
Query: 200 LFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPIS 379
L H +TPE+N FEF+ N K + +LL YP+ +K+ A++ LL LAQ+Q+G +L ++
Sbjct: 26 LVTHHETPENNDDTYFEFTPENYKIINSLLKRYPDNYKKSAVLYLLHLAQKQNGNFLTLA 85
Query: 380 AMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQET 559
AM+KVA+IL + + VYEVA FY+MF R +GK +Q+C TTPC L G+ I+ A +
Sbjct: 86 AMNKVAKILEMTNLNVYEVAAFYSMFNREKVGKIRLQICGTTPCLLCGARDIMKACEDHL 145
Query: 560 NCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD-YYEDLSVEDTKEIISKLKKDEKPK 736
++GG + G F++ EVECLG C NAPM+QVN++ YEDL+ E E++ K +K E+ K
Sbjct: 146 GIKMGGTTKDGMFTLEEVECLGVCANAPMMQVNNEKVYEDLTPEIMPEMLEKFRKGEEIK 205
Query: 737 PGPRS-GRFASE-PLGGLT 787
GP++ GR +E PLG T
Sbjct: 206 AGPQTKGRKNAEGPLGRTT 224
>UniRef50_A5NY87 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Methylobacterium sp. 4-46|Rep: NADH-quinone
oxidoreductase, E subunit - Methylobacterium sp. 4-46
Length = 394
Score = 182 bits (442), Expect = 2e-44
Identities = 91/197 (46%), Positives = 120/197 (60%)
Frame = +2
Query: 212 RDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHK 391
R P + F F+ N + EA +A YPEG + A+IPLL AQ Q+GGWLP A+
Sbjct: 5 RLAPAEQQPAAFAFTPENARWAEAQIAKYPEGRQASAVIPLLWRAQEQNGGWLPQKAIEA 64
Query: 392 VAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEV 571
VA+ L +P +RV EVATFYTMF P+G+Y +QVC T PC + G+ + + +
Sbjct: 65 VADELGMPHIRVLEVATFYTMFALEPVGRYWIQVCGTVPCDVCGAKELKHYLHDRLG-PA 123
Query: 572 GGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRS 751
G SP G FS EVECLGAC NAPM+Q+N DYYEDL+ E ++ L K G ++
Sbjct: 124 GHVSPDGNFSWLEVECLGACCNAPMVQINQDYYEDLTPEILGRLMDDLAAGRPVKAGSQA 183
Query: 752 GRFASEPLGGLTSLTEE 802
GR +SEP G T+LT+E
Sbjct: 184 GRTSSEPKGAATTLTDE 200
>UniRef50_Q4QEG7 Cluster: NADH-ubiquinone oxidoreductase,
mitochondrial, putative; n=6; Trypanosomatidae|Rep:
NADH-ubiquinone oxidoreductase, mitochondrial, putative
- Leishmania major
Length = 273
Score = 182 bits (442), Expect = 2e-44
Identities = 91/214 (42%), Positives = 134/214 (62%), Gaps = 12/214 (5%)
Frame = +2
Query: 209 HRDTPEDNPSIPFEFSQANQKRVE-ALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAM 385
H++T DN IP++F+ ++ +++ +L +P G + A IPLL LAQ+Q GG++P++AM
Sbjct: 40 HQNTDYDNTRIPWDFTTSSYEKIHNEILPKFPRGRRISATIPLLHLAQQQQGGYIPVTAM 99
Query: 386 HKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNC 565
+K+A+I +P M V+E TFY+MF R P+GKYH+Q C TTPC L G+D ++ N
Sbjct: 100 YKIAKICEVPPMHVFETVTFYSMFNRHPVGKYHIQFCRTTPCMLCGADELMERTMHYLNV 159
Query: 566 EVGGNSPCGKFSVSEVECLGACVNAPMIQVND---------DYYEDLSVEDTKEIISKLK 718
+ G + G ++ E+ECLGACVNAPM+ V+D DY EDL+ E K ++ L+
Sbjct: 160 RMHGTTSDGLITIGEMECLGACVNAPMLVVSDYSNPPNFSYDYMEDLTWESIKTLVENLR 219
Query: 719 KDEKPKPG-PRSGRFASEPLGGLTSLT-EEPTGP 814
+ K G R R +EP GG TSL +EP GP
Sbjct: 220 GGKPFKIGSQRLDRRYAEPAGGRTSLLFKEPPGP 253
>UniRef50_A3U1M2 Cluster: ATP synthase subunit E; n=9;
Alphaproteobacteria|Rep: ATP synthase subunit E -
Oceanicola batsensis HTCC2597
Length = 460
Score = 181 bits (441), Expect = 3e-44
Identities = 94/203 (46%), Positives = 128/203 (63%), Gaps = 1/203 (0%)
Frame = +2
Query: 206 VHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAM 385
+H+D PE F F+ NQK EA + YPEG + A+IPLL AQ Q G WL A+
Sbjct: 5 LHKDQPES-----FAFTPENQKWAEAQMTKYPEGRQASAIIPLLWRAQEQEG-WLTRPAI 58
Query: 386 HKVAEILNLPKMRVYEVATFYTMFIRRPIGKY-HVQVCTTTPCWLRGSDAILNAIKQETN 562
+A +L++ +R EVATFY MF P+G HVQ+C TT C + G++ ++ ++
Sbjct: 59 EHIAAMLDMAYIRALEVATFYFMFQLAPVGSVAHVQICGTTSCMICGAEDLIAVCQEMIA 118
Query: 563 CEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPG 742
+ S GKFS EVECLGAC NAPM Q+ DYYEDL+ E +EI+ +L + + P PG
Sbjct: 119 PKAHEVSADGKFSWEEVECLGACANAPMAQIGKDYYEDLTAERLREILGELAEGKVPVPG 178
Query: 743 PRSGRFASEPLGGLTSLTEEPTG 811
P++GR+A+EPL GLTSLTE +G
Sbjct: 179 PQNGRYAAEPLKGLTSLTEYDSG 201
>UniRef50_A5CES4 Cluster: NADH dehydrogenase I chain E; n=1;
Orientia tsutsugamushi Boryong|Rep: NADH dehydrogenase I
chain E - Orientia tsutsugamushi (strain Boryong)
(Rickettsia tsutsugamushi)
Length = 192
Score = 173 bits (420), Expect = 1e-41
Identities = 82/165 (49%), Positives = 111/165 (67%), Gaps = 2/165 (1%)
Frame = +2
Query: 248 EFSQANQKRVEALLAI--YPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKM 421
EFS +N+ V A I YP G + A++ +LDLAQ Q+ WL S + VA +L +P +
Sbjct: 8 EFSFSNETLVIAKKIINNYPAGKEASAVLAILDLAQNQNNNWLSNSCIEYVANLLKMPYI 67
Query: 422 RVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFS 601
+VYE+A+FYTMF +P+GKYH+Q+C TTPCWLRGSD I+N K+ E G S F+
Sbjct: 68 KVYEIASFYTMFNLQPVGKYHIQICGTTPCWLRGSDDIMNFCKKLLKIETGKTSQDKLFT 127
Query: 602 VSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPK 736
VSE ECLGAC NAP++Q+N DYYE+L+ + KEII+ L + K
Sbjct: 128 VSETECLGACRNAPVVQINHDYYENLTNDKIKEIINNLHAKDLQK 172
>UniRef50_Q5FGV2 Cluster: NADH-quinone oxidoreductase chain E; n=5;
canis group|Rep: NADH-quinone oxidoreductase chain E -
Ehrlichia ruminantium (strain Gardel)
Length = 183
Score = 171 bits (417), Expect = 2e-41
Identities = 78/161 (48%), Positives = 110/161 (68%)
Frame = +2
Query: 245 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 424
F+F++ + K+ L YP K A++PLL +AQ+Q GG +PI+AM+ +A+ L++ +
Sbjct: 18 FKFNKESLKQANDALNRYPSDRKSSAVMPLLHIAQKQCGGLIPIAAMNYIADFLDMKPIH 77
Query: 425 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSV 604
VYEVA FY+M+ GKY VQVC TTPCWL GSD +L A K+ N +VG + F++
Sbjct: 78 VYEVAKFYSMYNLSVTGKYLVQVCRTTPCWLCGSDNVLKACKEFLNIDVGNTTDDNLFTL 137
Query: 605 SEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDE 727
EVECLGACVNAP++Q+NDDYYE L+ + K I+ + KK E
Sbjct: 138 KEVECLGACVNAPVVQINDDYYEKLNADKIKNILMEYKKKE 178
>UniRef50_P29914 Cluster: NADH-quinone oxidoreductase chain 2; n=22;
Alphaproteobacteria|Rep: NADH-quinone oxidoreductase
chain 2 - Paracoccus denitrificans
Length = 239
Score = 169 bits (412), Expect = 1e-40
Identities = 83/186 (44%), Positives = 118/186 (63%), Gaps = 1/186 (0%)
Frame = +2
Query: 245 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 424
FEF+ AN + A + YPEG ++ A+IP+L AQ Q G WL A+ A++L +P +R
Sbjct: 13 FEFTPANLEWARAQMTKYPEGRQQSAIIPVLWRAQEQEG-WLSRPAIEYCADLLGMPYIR 71
Query: 425 VYEVATFYTMFIRRPIGKY-HVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFS 601
EVATFY MF +P+G H+Q+C TT C + G++ ++ K++ E S G+FS
Sbjct: 72 ALEVATFYFMFQLQPVGSVAHIQICGTTTCMICGAEDLIRVCKEKIAPEPHALSADGRFS 131
Query: 602 VSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGG 781
EVECLGAC NAPM Q+ D+YEDL+VE +I + E P PGP++GRF++E LGG
Sbjct: 132 WEEVECLGACTNAPMAQIGKDFYEDLTVEKLAALIDRFAAGEVPVPGPQNGRFSAEALGG 191
Query: 782 LTSLTE 799
T+L +
Sbjct: 192 PTALAD 197
>UniRef50_Q8G1B3 Cluster: NADH dehydrogenase I, E subunit; n=9;
Rhizobiales|Rep: NADH dehydrogenase I, E subunit -
Brucella suis
Length = 237
Score = 168 bits (408), Expect = 3e-40
Identities = 86/189 (45%), Positives = 120/189 (63%), Gaps = 3/189 (1%)
Frame = +2
Query: 245 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 424
F F+ N+ +A YPEG ++ A+IPLL AQ Q G W+ +++ VA +LN+P +R
Sbjct: 16 FAFNAENEAWAHKTIAKYPEGRQQSAVIPLLMRAQEQEG-WVTKASIEYVAAMLNMPLIR 74
Query: 425 VYEVATFYTMFIRRPIG-KYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFS 601
V EVATFYT F +P+G + H+QVC TTPC LRGS+A+++ + + + + + G S
Sbjct: 75 VLEVATFYTQFQLKPVGSRAHIQVCGTTPCMLRGSEALMDVCRHKIHHDPFELNADGTLS 134
Query: 602 VSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLK--KDEKPKPGPRSGRFASEPL 775
EVEC GAC NAPM+ + D YEDL+ E EII + K + KPGP+ GR SEP
Sbjct: 135 WEEVECQGACANAPMVMIFKDAYEDLTPERLAEIIDAFEAGKGDTIKPGPQDGRVTSEPA 194
Query: 776 GGLTSLTEE 802
GLT+LTE+
Sbjct: 195 SGLTALTED 203
>UniRef50_A7DLV4 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Methylobacterium extorquens PA1|Rep: NADH-quinone
oxidoreductase, E subunit - Methylobacterium extorquens
PA1
Length = 412
Score = 165 bits (402), Expect = 2e-39
Identities = 85/186 (45%), Positives = 111/186 (59%)
Frame = +2
Query: 245 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 424
F F+ N +A YPEG + A+IPLL AQ Q+GGWLP A+ VA+ L +P +R
Sbjct: 16 FAFTPENADWARGQIAKYPEGRQASAVIPLLWKAQEQNGGWLPQKAIEAVADELGMPHIR 75
Query: 425 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSV 604
V EVATFYTMF P+G++ +QVC T PC G+ L A E G + G FS
Sbjct: 76 VLEVATFYTMFALEPVGRFWIQVCGTVPCDCCGAKE-LKASLHERLGPSGKVTADGNFSW 134
Query: 605 SEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGL 784
EVECLGAC NAPM+Q+N DYYEDL+ E +++ L K G + GR +SEP +
Sbjct: 135 LEVECLGACCNAPMVQINQDYYEDLTPESLNKLMDDLAAGRPVKVGSQIGRVSSEPKDAV 194
Query: 785 TSLTEE 802
+LT+E
Sbjct: 195 NTLTDE 200
>UniRef50_Q98KQ9 Cluster: NADH-ubiquinone dehydrogenase chain E 1;
n=3; Bacteria|Rep: NADH-ubiquinone dehydrogenase chain E
1 - Rhizobium loti (Mesorhizobium loti)
Length = 424
Score = 161 bits (392), Expect = 3e-38
Identities = 81/191 (42%), Positives = 120/191 (62%), Gaps = 3/191 (1%)
Frame = +2
Query: 239 IPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPK 418
+ F F++AN + + YP+G ++ A+IPLL LAQ Q G W+ +A+ ++++L +P+
Sbjct: 14 VSFAFNRANAAAAKQWIKKYPKGREQSAIIPLLMLAQEQEG-WVTKAAIETISDMLGMPR 72
Query: 419 MRVYEVATFYTMFIRRPIG-KYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGK 595
+R EVATFYT + P+G + H+QVC TTPC LRGS+A+++ + + + + + G
Sbjct: 73 IRGLEVATFYTQYQLNPVGTRAHIQVCGTTPCMLRGSEALMDVCRSKIHHDQFHTNDKGT 132
Query: 596 FSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIIS--KLKKDEKPKPGPRSGRFASE 769
S EVECLGACVNAPM+ + D +EDL+ E EII K PGP++GR SE
Sbjct: 133 LSWEEVECLGACVNAPMVMIFKDTFEDLTPERLAEIIDLYDAGKGASVAPGPQNGRTGSE 192
Query: 770 PLGGLTSLTEE 802
P GLT+L E
Sbjct: 193 PASGLTTLKSE 203
>UniRef50_P56909 Cluster: NADH-quinone oxidoreductase subunit E 1;
n=21; Rhizobiales|Rep: NADH-quinone oxidoreductase
subunit E 1 - Rhizobium meliloti (Sinorhizobium
meliloti)
Length = 275
Score = 158 bits (383), Expect = 3e-37
Identities = 84/186 (45%), Positives = 117/186 (62%), Gaps = 3/186 (1%)
Frame = +2
Query: 245 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 424
F FS+ N EA + YPEG ++ A+IPLL AQ Q G W+ +A+ VA++L + +R
Sbjct: 16 FAFSKENAAWAEATIKKYPEGREQSAVIPLLMRAQEQDG-WVTRAAIESVADMLGMAYIR 74
Query: 425 VYEVATFYTMFIRRPIG-KYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFS 601
V EVATFYT F +P+G + HVQVC TTPC LRG++ ++ K++ E + G S
Sbjct: 75 VLEVATFYTQFQLQPVGTRAHVQVCGTTPCMLRGAEDLIKICKKKIASEPFTLNEGGTLS 134
Query: 602 VSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLK--KDEKPKPGPRSGRFASEPL 775
EVEC GACVNAPM+ + D +EDL+ E +EII + + K + PGP+ R S P+
Sbjct: 135 WEEVECQGACVNAPMVMIFKDTFEDLTPERLEEIIDRFEAGKGSEVVPGPQIDRVYSAPI 194
Query: 776 GGLTSL 793
GGLT+L
Sbjct: 195 GGLTTL 200
>UniRef50_A3UCV4 Cluster: ATP synthase subunit E; n=4;
Alphaproteobacteria|Rep: ATP synthase subunit E -
Oceanicaulis alexandrii HTCC2633
Length = 346
Score = 155 bits (375), Expect = 3e-36
Identities = 83/182 (45%), Positives = 116/182 (63%), Gaps = 6/182 (3%)
Frame = +2
Query: 245 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 424
F F++ ++ +V+ LA YPE K A+IPLL +AQ+Q W+ AM ++A +P +R
Sbjct: 14 FAFNEKSEAKVKFWLAKYPEERKASAVIPLLWIAQKQDN-WVSEPAMREIAARCGMPYIR 72
Query: 425 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGN--SPCGKF 598
VYEVATFYTMF GK+ +QVC TTPCWLRG+D L A+ ++ + G S G
Sbjct: 73 VYEVATFYTMFNLEQTGKHLIQVCGTTPCWLRGADD-LKAVCEKKIGKKGREHVSSDGML 131
Query: 599 SVSEVECLGACVNAPMIQVN----DDYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFAS 766
+ EVECLGAC NAPM+Q++ D YYEDL+ E ++++ L+ ++ K GP SGR S
Sbjct: 132 AWEEVECLGACANAPMVQISNTEGDLYYEDLTAEALEQMLDDLRAGKEVKAGPISGRSCS 191
Query: 767 EP 772
EP
Sbjct: 192 EP 193
>UniRef50_Q83BQ9 Cluster: NADH dehydrogenase I, E subunit; n=3;
Coxiella burnetii|Rep: NADH dehydrogenase I, E subunit -
Coxiella burnetii
Length = 174
Score = 142 bits (343), Expect = 2e-32
Identities = 64/155 (41%), Positives = 100/155 (64%), Gaps = 1/155 (0%)
Frame = +2
Query: 269 KRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFY 448
K ++ LA YP KR A++P L Q+Q+ GWL +AM+ +A+ L LP++ VYEVATFY
Sbjct: 16 KEIDRWLAKYPTDQKRSAVVPALLFVQKQNNGWLSKAAMNALADYLQLPRIWVYEVATFY 75
Query: 449 TMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGA 628
M+ +P+GK+ + +C PC+LRGSD I+ +K+ + + G F++ VEC+ A
Sbjct: 76 DMYNLKPMGKHKISICQNVPCFLRGSDEIVACVKERLGIDFDETTSDGLFTLKSVECMAA 135
Query: 629 CVNAPMIQVND-DYYEDLSVEDTKEIISKLKKDEK 730
C APM Q++D +Y+E+L+ E II KL+++ K
Sbjct: 136 CGGAPMCQIDDQEYHENLTPEKMIAIIDKLERESK 170
>UniRef50_Q11VB6 Cluster: NADH dehydrogenase I chain E; n=2;
Bacteroidetes|Rep: NADH dehydrogenase I chain E -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 177
Score = 140 bits (339), Expect = 7e-32
Identities = 60/154 (38%), Positives = 100/154 (64%)
Frame = +2
Query: 245 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 424
F+FS+A+ K+++ + A YPEG ++ A++P+L +AQ + GGWLP M VA +L++ +
Sbjct: 8 FQFSEASLKKIQEMKARYPEGRQKSALLPVLHMAQDELGGWLPAPLMDYVASLLDITPIE 67
Query: 425 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSV 604
VYEVA+FY+M+ +P+GK + C T PC L G + ++ + + ++ S G+F++
Sbjct: 68 VYEVASFYSMYNLKPVGKCMFEFCQTGPCCLNGVEELIEYTEDKLGIKLNQTSADGRFTI 127
Query: 605 SEVECLGACVNAPMIQVNDDYYEDLSVEDTKEII 706
VEC+G+C APM Q+ YYE+L+ E +II
Sbjct: 128 KAVECMGSCGTAPMAQIGTYYYENLTKEKIDKII 161
>UniRef50_A2F771 Cluster: Respiratory-chain NADH dehydrogenase 24 Kd
subunit family protein; n=2; Trichomonas vaginalis|Rep:
Respiratory-chain NADH dehydrogenase 24 Kd subunit
family protein - Trichomonas vaginalis G3
Length = 201
Score = 135 bits (327), Expect = 2e-30
Identities = 67/164 (40%), Positives = 105/164 (64%), Gaps = 1/164 (0%)
Frame = +2
Query: 248 EFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRV 427
+F ++Q +V+A+LA YP+ +KR A IPLL L QR++GG+L + +++I+ + RV
Sbjct: 24 DFKFSDQSKVDAILAKYPKENKRAATIPLLHLGQRENGGYLTTGVLQAISKIVGVTAGRV 83
Query: 428 YEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEV-GGNSPCGKFSV 604
+E A FY+MF +P + V+VC C+L GSD + AI++ T G SP G+F++
Sbjct: 84 HETACFYSMFRFQPPNNHIVEVCKGLSCYLTGSDNVKEAIQKATGGTFKEGKSPDGQFTL 143
Query: 605 SEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPK 736
EVECLGAC NAP++ ++ YY++L+ E K II +K + K
Sbjct: 144 EEVECLGACANAPVMILDGVYYQNLTAETAKIIIECVKAGKSVK 187
>UniRef50_A6H1R0 Cluster: NADH dehydrogenase I, E subunit; n=2;
Bacteroidetes|Rep: NADH dehydrogenase I, E subunit -
Flavobacterium psychrophilum (strain JIP02/86 / ATCC
49511)
Length = 176
Score = 130 bits (313), Expect = 1e-28
Identities = 63/158 (39%), Positives = 95/158 (60%)
Frame = +2
Query: 254 SQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYE 433
++A R+E L + YPE ++ A++P+L Q WL I KVAEIL++ + VYE
Sbjct: 13 TEALMTRIEELCSHYPEDKRKSALLPVLHEVQDAHENWLSIELQDKVAEILHIKPVEVYE 72
Query: 434 VATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEV 613
V +FYTM+ RRPIGKY + C T+PC L G++ +++ + +VG + G F V V
Sbjct: 73 VVSFYTMYNRRPIGKYMFEFCQTSPCCLNGTENLMDYTCDKLGVKVGEPTADGLFEVRGV 132
Query: 614 ECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDE 727
ECLGAC APM+Q+ D Y E L+ ++I+ K ++
Sbjct: 133 ECLGACDYAPMMQLGDFYQEHLTEAKIDQLIADCKDNK 170
>UniRef50_P56910 Cluster: NADH-quinone oxidoreductase subunit E 2;
n=3; Rhizobiaceae|Rep: NADH-quinone oxidoreductase
subunit E 2 - Rhizobium meliloti (Sinorhizobium
meliloti)
Length = 168
Score = 124 bits (300), Expect = 4e-27
Identities = 60/155 (38%), Positives = 97/155 (62%)
Frame = +2
Query: 266 QKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATF 445
++ +EA A YP+ +R A++P L +AQ++ G LP + +VA+IL + ++ VYE+ATF
Sbjct: 4 REEIEAAAARYPD--RRSAIMPALMIAQKEHGH-LPGPVLEEVAQILGVERVWVYELATF 60
Query: 446 YTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLG 625
YT+F PIG++H+Q+C C L GS+A+L ++ G +P G F++S VECLG
Sbjct: 61 YTLFHTEPIGRFHLQLCDNVSCMLCGSEALLTHLETTLGIRKGETTPDGAFTLSTVECLG 120
Query: 626 ACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEK 730
AC AP++QV DDY+ +L ++ + E+
Sbjct: 121 ACEMAPVMQVGDDYHGNLDAARLDALLESFRAAER 155
>UniRef50_Q6MIR6 Cluster: NADH dehydrogenase I chain E; n=1;
Bdellovibrio bacteriovorus|Rep: NADH dehydrogenase I
chain E - Bdellovibrio bacteriovorus
Length = 159
Score = 124 bits (299), Expect = 5e-27
Identities = 60/158 (37%), Positives = 97/158 (61%)
Frame = +2
Query: 245 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 424
F+ S + V++ LA Y K A+IP L +AQ+++ G++ + +++++++P+ R
Sbjct: 4 FKLSDSGLAAVKSELARYEA--KESAIIPSLYIAQKENNGFITPEIIRTLSQVMDIPEAR 61
Query: 425 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSV 604
+ EV FYTMF ++P+GKYHVQVCT C L G + I E + + G+F+V
Sbjct: 62 INEVFKFYTMFNQKPVGKYHVQVCTNISCALEGGREMAKHICHELGVKFDQVTADGRFTV 121
Query: 605 SEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLK 718
S+VECLG+C APM+QVND Y+E L+ E ++ +K
Sbjct: 122 SKVECLGSCGTAPMMQVNDSYHEKLTPETAMNLLRGMK 159
>UniRef50_Q2LQE7 Cluster: NADH-quinone oxidoreductase chain F; n=1;
Syntrophus aciditrophicus SB|Rep: NADH-quinone
oxidoreductase chain F - Syntrophus aciditrophicus
(strain SB)
Length = 574
Score = 123 bits (297), Expect = 8e-27
Identities = 59/155 (38%), Positives = 98/155 (63%), Gaps = 1/155 (0%)
Frame = +2
Query: 275 VEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTM 454
+ LL YPE K+ A++P L LAQ+++ L + VAE++++P + Y +AT+Y+M
Sbjct: 10 IHRLLGRYPE--KQSALMPALMLAQKENANRLDQDDIRTVAELVDVPFGKAYGLATYYSM 67
Query: 455 F-IRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGAC 631
+ + +P+G+YH+QV T P L G+ IL+ +++ N G +P G F++SEVECL +C
Sbjct: 68 YNVEKPVGRYHLQVDTNIPATLMGAGEILDHLEKTLNIRAGETTPDGLFTLSEVECLASC 127
Query: 632 VNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPK 736
P+IQVND YYE+++ E ++ L+K P+
Sbjct: 128 GTCPVIQVNDVYYENMTREKVDSLLDSLRKGMMPE 162
>UniRef50_A1AVR6 Cluster: NADH-quinone oxidoreductase, E subunit;
n=2; sulfur-oxidizing symbionts|Rep: NADH-quinone
oxidoreductase, E subunit - Ruthia magnifica subsp.
Calyptogena magnifica
Length = 157
Score = 118 bits (285), Expect = 2e-25
Identities = 53/151 (35%), Positives = 91/151 (60%)
Frame = +2
Query: 266 QKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATF 445
+K+++A +A YP+ K A++ L + Q ++ L + VA+ L++P + V EVATF
Sbjct: 7 KKQIDAWIAKYPKDRKSSAVMQTLKIIQAENENKLSADTIQAVADYLDMPDIAVQEVATF 66
Query: 446 YTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLG 625
Y + + +GKY ++ C C L G+D ++ ++ + + +P G SV +VECLG
Sbjct: 67 YENYNHKKVGKYVIRFCHNISCMLNGADDLIAYLENKLGVQTDEVTPDGLISVKKVECLG 126
Query: 626 ACVNAPMIQVNDDYYEDLSVEDTKEIISKLK 718
ACV APM Q+ND+Y+E+L+ + +I+ LK
Sbjct: 127 ACVGAPMFQINDEYFENLTFDKIDKIVDNLK 157
>UniRef50_A5UZH6 Cluster: NADH-quinone oxidoreductase, E subunit;
n=5; Chloroflexi (class)|Rep: NADH-quinone
oxidoreductase, E subunit - Roseiflexus sp. RS-1
Length = 174
Score = 117 bits (282), Expect = 6e-25
Identities = 60/165 (36%), Positives = 105/165 (63%), Gaps = 2/165 (1%)
Frame = +2
Query: 275 VEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTM 454
+EA++A YP HK A++PLL +AQ + G +L +AM +VAE+L++P V+EVA FY++
Sbjct: 11 IEAIIARYP--HKPSAVLPLLFIAQDEYG-YLTEAAMREVAELLDMPPTDVFEVAGFYSL 67
Query: 455 FIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACV 634
+P+GK+ +QVC PC G++ ++ ++ + V +P G F++ V+CL C
Sbjct: 68 LYEQPVGKWVLQVCDDVPCAFCGAEDLIATLQAKLGIGVDQTTPDGMFTLQRVKCLADCD 127
Query: 635 NAPMIQVNDDYYEDLSV-EDTKEIISKLK-KDEKPKPGPRSGRFA 763
+AP++Q N +YY DL+ E +++++ L+ + E + SGR+A
Sbjct: 128 HAPVLQANLEYYHDLTTPEKVEQVLAMLRQRAESGEQLSISGRYA 172
>UniRef50_A7HLQ9 Cluster: NADH-quinone oxidoreductase, E subunit;
n=3; Thermotogaceae|Rep: NADH-quinone oxidoreductase, E
subunit - Fervidobacterium nodosum Rt17-B1
Length = 161
Score = 116 bits (280), Expect = 1e-24
Identities = 58/140 (41%), Positives = 81/140 (57%), Gaps = 1/140 (0%)
Frame = +2
Query: 311 KRGAMIPLLDLAQ-RQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHV 487
+R ++ LL Q ++P +AE LN+P +VYEV TFYTMF +P GKY +
Sbjct: 20 ERDMLVYLLHRVQDHYQSHYIPPEVGEMIAEELNIPSSKVYEVLTFYTMFSTKPRGKYII 79
Query: 488 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 667
+VCT+ PC + G I+ +KQ+ + G + G F++ E CLG C +P+I VND Y
Sbjct: 80 RVCTSLPCHVPGGREIVQFLKQKLGVDFGETTKDGLFTLEETGCLGLCGVSPVIMVNDQY 139
Query: 668 YEDLSVEDTKEIISKLKKDE 727
Y DL+VE EII LK E
Sbjct: 140 YGDLTVEKVNEIIENLKGGE 159
>UniRef50_Q9PGJ1 Cluster: NADH-ubiquinone oxidoreductase, NQO2
subunit; n=13; Gammaproteobacteria|Rep: NADH-ubiquinone
oxidoreductase, NQO2 subunit - Xylella fastidiosa
Length = 175
Score = 116 bits (279), Expect = 1e-24
Identities = 53/149 (35%), Positives = 91/149 (61%), Gaps = 1/149 (0%)
Frame = +2
Query: 275 VEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTM 454
++ LA +P KR A++ L AQ Q+ GWL + VA+ L++P + YEVATFY+M
Sbjct: 27 IDHWLAKFPADQKRSALLQGLYAAQEQNQGWLTDELIAAVAKYLDIPSVWAYEVATFYSM 86
Query: 455 FIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGK-FSVSEVECLGAC 631
F R +G+++V CT CWL G++ +++ +++ C++G ++ G+ + E ECL AC
Sbjct: 87 FETRKVGRHNVAFCTNVSCWLNGAEDLVSYAEEKLGCKLGQSTADGRVYLKCEEECLAAC 146
Query: 632 VNAPMIQVNDDYYEDLSVEDTKEIISKLK 718
APM+ +N Y+E L+ E +++ L+
Sbjct: 147 AGAPMMVINGHYHERLTKEKVDQLLDGLE 175
>UniRef50_Q0EZQ5 Cluster: NADH dehydrogenase I chain E; n=1;
Mariprofundus ferrooxydans PV-1|Rep: NADH dehydrogenase
I chain E - Mariprofundus ferrooxydans PV-1
Length = 170
Score = 115 bits (276), Expect = 3e-24
Identities = 58/158 (36%), Positives = 95/158 (60%)
Frame = +2
Query: 251 FSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVY 430
FS+A + L+ YP + A++P+L +AQ + G+L + VA++L L M+V
Sbjct: 12 FSEARLAEIAELVKRYPGA--QSALMPVLYMAQ-EDFGYLSMDVQQHVADVLGLRLMQVR 68
Query: 431 EVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSE 610
EV TFYTMF +P G Y ++VCT C L G++ ++ + + +VG + G F+V+E
Sbjct: 69 EVVTFYTMFREKPCGTYLLEVCTNAGCMLNGANELVAHMCETLGIKVGETTDDGLFTVAE 128
Query: 611 VECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKD 724
VEC GAC AP++QVN Y+E ++ E +I++++ D
Sbjct: 129 VECAGACGGAPVVQVNHTYHEKVTPETMDALITQMRAD 166
>UniRef50_A6FCN2 Cluster: NuoE2 NADH I CHAIN E; n=1; Moritella sp.
PE36|Rep: NuoE2 NADH I CHAIN E - Moritella sp. PE36
Length = 207
Score = 111 bits (268), Expect = 3e-23
Identities = 56/151 (37%), Positives = 96/151 (63%), Gaps = 1/151 (0%)
Frame = +2
Query: 284 LLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIR 463
++ YP +R A++P L LAQ + G+L +A +AEIL++P++ V+E+A+FYT++
Sbjct: 21 IVKCYPT--QRSAIMPALYLAQ-DTYGFLDETAYRAIAEILDIPEIWVFELASFYTLYKN 77
Query: 464 RPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAP 643
+ IGKY++Q+CT PC LRG+ +L ++ G S G F+++ VEC+G+C AP
Sbjct: 78 KKIGKYNLQLCTNVPCMLRGAYDLLGHLQTRLGINKGDTSTDGLFTLTTVECIGSCDLAP 137
Query: 644 MIQVNDDYYEDLSVEDTKEIISKLKKDE-KP 733
+ VN+ Y+ +LS E +++ +L + KP
Sbjct: 138 AMMVNETYHTNLSKERVDKLLDQLSQSSIKP 168
>UniRef50_Q02CT9 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Solibacter usitatus Ellin6076|Rep: NADH-quinone
oxidoreductase, E subunit - Solibacter usitatus (strain
Ellin6076)
Length = 160
Score = 111 bits (267), Expect = 4e-23
Identities = 57/154 (37%), Positives = 89/154 (57%)
Frame = +2
Query: 266 QKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATF 445
+ R E LL YP G +R AMIP+L AQ + G + + +VA + + ++V EV T+
Sbjct: 8 EARFEKLLTSYPPGRQRSAMIPMLMYAQDELG-CVSDELIAEVARRIGVTPLQVNEVLTY 66
Query: 446 YTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLG 625
Y+M R+P+GKYHVQVCT C L D + ++ + G+FS+ EVEC+G
Sbjct: 67 YSMLHRKPLGKYHVQVCTNISCLLHDGDKLYEHTCKKLGITHKEVTADGQFSIEEVECMG 126
Query: 626 ACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDE 727
AC AP IQ+N D++ ++ E +++ L+K +
Sbjct: 127 ACSWAPAIQINYDFHHYVTPEKLDQLLDGLRKKQ 160
>UniRef50_A1WXW3 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Halorhodospira halophila SL1|Rep: NADH-quinone
oxidoreductase, E subunit - Halorhodospira halophila
(strain DSM 244 / SL1) (Ectothiorhodospirahalophila
(strain DSM 244 / SL1))
Length = 170
Score = 110 bits (264), Expect = 8e-23
Identities = 58/165 (35%), Positives = 94/165 (56%), Gaps = 5/165 (3%)
Frame = +2
Query: 236 SIPFEFSQANQKR-VEALLAIYPEGH--KRGAMIPLLDLAQRQSGGWLPISAMHKVAEIL 406
++ E A+Q+R ++ LA YP+ + A+IP L + Q +GGWL S + A+ +
Sbjct: 5 TVEAEILNADQRRRIDHWLAKYPDDEQGRASAIIPALHILQDDNGGWLERSHVAAAADYI 64
Query: 407 NLPKMRVYEVATFYTMF-IRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNS 583
+P+ +EVATFY+MF + P+G++ V CT C L G+D ++ +++ +G +
Sbjct: 65 GMPRASAFEVATFYSMFHLDEPVGRHKVNFCTNISCCLNGADELVAYAEEKLGIRLGETT 124
Query: 584 PCGKFS-VSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKL 715
P G+ + V E ECL AC APM+ V+ YY L+ E EI+ L
Sbjct: 125 PDGRITLVREEECLAACTRAPMMVVDGHYYTHLTRERIDEILDGL 169
>UniRef50_Q9S5X7 Cluster: Fe-hydrogenase, subunit gamma; n=5;
Thermotogaceae|Rep: Fe-hydrogenase, subunit gamma -
Thermotoga maritima
Length = 164
Score = 109 bits (261), Expect = 2e-22
Identities = 56/154 (36%), Positives = 92/154 (59%)
Frame = +2
Query: 269 KRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFY 448
++VE +L Y G+KR +I +L L ++ +LP ++ V+ + +P ++Y VATFY
Sbjct: 9 EKVEEILKKY--GYKRENLIKIL-LEIQEIYRYLPEDVINYVSTAMGIPPAKIYGVATFY 65
Query: 449 TMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGA 628
F +P GKY + VC T C + GS +L AI++ET G + FS+ +V CLGA
Sbjct: 66 AQFSLKPKGKYTIMVCDGTACHMAGSPEVLKAIEEETGLTPGNVTEDLMFSLDQVGCLGA 125
Query: 629 CVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEK 730
C AP++ +N + Y +L+ + KEI+ K+K+ E+
Sbjct: 126 CALAPVMVINGEVYGNLTADKVKEILRKIKEKER 159
>UniRef50_A7HII1 Cluster: NADH-quinone oxidoreductase, E subunit;
n=2; Anaeromyxobacter|Rep: NADH-quinone oxidoreductase,
E subunit - Anaeromyxobacter sp. Fw109-5
Length = 188
Score = 109 bits (261), Expect = 2e-22
Identities = 58/160 (36%), Positives = 87/160 (54%)
Frame = +2
Query: 239 IPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPK 418
+P E + + + +L YP K AM+P L + Q + G+L + A+ L
Sbjct: 30 LPREKVEHFDRDLAEVLRRYPPDRKAAAMLPALRIGQ-EIFGYLTPAVQRLAADRLGTSP 88
Query: 419 MRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKF 598
R EVATFY MF RPIG++ V+VCT C L G D + +K + GG S G+
Sbjct: 89 ARAEEVATFYVMFNTRPIGRHLVEVCTNVSCCLTGGDRLFEYLKHKYGVTNGGTSQDGRV 148
Query: 599 SVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLK 718
++ EVECLGAC AP + V+++ YE L + +EI+ +L+
Sbjct: 149 TLREVECLGACGTAPAMLVDEEMYERLDPKKVEEILGRLE 188
>UniRef50_Q6A6G2 Cluster: NADH dehydrogenase I chain E; n=1;
Propionibacterium acnes|Rep: NADH dehydrogenase I chain
E - Propionibacterium acnes
Length = 261
Score = 107 bits (258), Expect = 5e-22
Identities = 52/145 (35%), Positives = 87/145 (60%)
Frame = +2
Query: 296 YPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIG 475
YP+ R A++P+L L Q G P+ + AE+L + +V VATFYTM+ + P G
Sbjct: 51 YPDS--RSALLPILHLVQSVDGRISPVG-IETAAEVLGITTAQVSGVATFYTMYKKHPAG 107
Query: 476 KYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQV 655
++H+ VCTT C + G + +L ++++ + G +P GKFS+ VEC AC AP++ V
Sbjct: 108 QHHIGVCTTALCAVMGGEEVLARVEKKLGIKEGQTTPDGKFSLERVECNAACDFAPIMMV 167
Query: 656 NDDYYEDLSVEDTKEIISKLKKDEK 730
N +Y ++++ +EI+ L +DE+
Sbjct: 168 NWEYMDNMTPIRAEEILDSLARDEE 192
>UniRef50_Q2JFL6 Cluster: NADH-quinone oxidoreductase, E subunit;
n=5; Actinomycetales|Rep: NADH-quinone oxidoreductase, E
subunit - Frankia sp. (strain CcI3)
Length = 262
Score = 107 bits (258), Expect = 5e-22
Identities = 62/196 (31%), Positives = 94/196 (47%), Gaps = 5/196 (2%)
Frame = +2
Query: 251 FSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVY 430
FS + ++A YP G R A++PLL L Q + G + + A++L + + V
Sbjct: 3 FSPETHAAAQEIIARYPAGRSRSALLPLLHLVQAEQG-CVTAQGVAFCADVLGITRAEVG 61
Query: 431 EVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSE 610
VATFYTM+ R P+G Y V VCT C L G + + + + +P G ++
Sbjct: 62 AVATFYTMYKRHPVGDYLVSVCTNLSCALLGGEDVYERVSKLLGVGHDETTPDGSITLEH 121
Query: 611 VECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKP---GPR-SGRFASEPLG 778
ECL AC AP++ VN ++Y+ + + + I+ L+ +P P GP S S L
Sbjct: 122 AECLAACDYAPVMTVNYEFYDQVDPDSAQAIVEDLRAGRRPAPTRGGPLCSFAEVSRQLA 181
Query: 779 GL-TSLTEEPTGPGFG 823
G E GPG G
Sbjct: 182 GFGDPRPEGVAGPGVG 197
>UniRef50_A4SXP9 Cluster: NADH-quinone oxidoreductase, E subunit;
n=51; Burkholderiales|Rep: NADH-quinone oxidoreductase,
E subunit - Polynucleobacter sp. QLW-P1DMWA-1
Length = 168
Score = 107 bits (256), Expect = 8e-22
Identities = 54/149 (36%), Positives = 84/149 (56%), Gaps = 1/149 (0%)
Frame = +2
Query: 287 LAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 466
+A YP HK+ A++ L AQ + G W+ + VA+IL +P + V EVATFY M+ +
Sbjct: 19 IAKYPAEHKQSAVMACLIAAQTEVG-WVSPEVIEAVAQILEMPTIAVDEVATFYNMYNTK 77
Query: 467 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPM 646
PIGKY + +CT PC L + +K+ +PCG F++ E EC+GAC ++P+
Sbjct: 78 PIGKYKLVICTNLPCQLTHGETAATYLKETLGIGFNETTPCGTFTLKEGECMGACGDSPV 137
Query: 647 IQVNDD-YYEDLSVEDTKEIISKLKKDEK 730
+ VND +S E ++S+L+ K
Sbjct: 138 MLVNDKRMCSFMSKEKIDALLSELRAGGK 166
>UniRef50_Q0C8X0 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 312
Score = 107 bits (256), Expect = 8e-22
Identities = 52/111 (46%), Positives = 73/111 (65%)
Frame = +2
Query: 125 RTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPE 304
R +Q L + R DSL VHR+ P +NPSIPF+F++ N K ++ +L YP
Sbjct: 111 RQFLQSLPKTQCRPFSAGPQLYSDSLSVHRNKPNNNPSIPFKFNEQNLKLIDEILKRYPP 170
Query: 305 GHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMF 457
+K+ A++P+LDL QRQ G+ IS M++VA +L +P MRVYEVATFYTM+
Sbjct: 171 QYKKAAVMPILDLGQRQH-GFTSISVMNEVARLLEMPPMRVYEVATFYTMY 220
Score = 78.2 bits (184), Expect = 4e-13
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Frame = +2
Query: 596 FSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKD-----EKPKPGPRSGRF 760
+++ +ECLGACVNAPM+Q+NDDYYEDL+ E K +++ LK+ + P PGP SGR
Sbjct: 217 YTMYNLECLGACVNAPMVQINDDYYEDLTPESIKALLTALKESSTGSAKVPAPGPLSGRQ 276
Query: 761 ASEPLGGLTSLTEEPTGP 814
E GLT+L + P
Sbjct: 277 TCENSAGLTNLRDPVWDP 294
>UniRef50_Q9RU91 Cluster: NADH dehydrogenase I, E subunit; n=2;
Deinococcus|Rep: NADH dehydrogenase I, E subunit -
Deinococcus radiodurans
Length = 207
Score = 106 bits (255), Expect = 1e-21
Identities = 53/146 (36%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
Frame = +2
Query: 299 PEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGK 478
P+G +R A++PLL Q + G++ + ++AE+ V V +FY+ + P G+
Sbjct: 22 PQG-RRSALMPLLREVQ-DAEGFVAAPRLAEIAELCGTTATEVRSVMSFYSTYHTVPTGR 79
Query: 479 YHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVN 658
YH+QVC+T C L GSDA+ + + + + G +P G+FSV +VECLG+C AP++Q+N
Sbjct: 80 YHLQVCSTLMCALAGSDALWDELVTRLDVQPGEVTPDGRFSVQKVECLGSCGTAPVLQLN 139
Query: 659 DD-YYEDLSVEDTKEIISKLKKDEKP 733
D+ +YE + E+++ L+ D+KP
Sbjct: 140 DEGFYERVGPARLAELLAALQADQKP 165
>UniRef50_Q0AZ71 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit-like protein precursor; n=4; Clostridiales|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit-like
protein precursor - Syntrophomonas wolfei subsp. wolfei
(strain Goettingen)
Length = 182
Score = 106 bits (254), Expect = 1e-21
Identities = 55/148 (37%), Positives = 81/148 (54%)
Frame = +2
Query: 284 LLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIR 463
L I + H++G++I +L AQ G+LP+S + +A L + +VY +ATFYT F
Sbjct: 26 LKIIEEKRHEKGSLIAILQQAQ-DIYGYLPLSVLKCIARELGIKPAKVYGIATFYTQFRL 84
Query: 464 RPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAP 643
+P GKY + C T C + GS+ I + + QE + G +P G FS+ CLG C AP
Sbjct: 85 QPAGKYQIMFCQGTACHVNGSERIESTLCQELKIKRGETTPDGLFSLESAACLGCCSLAP 144
Query: 644 MIQVNDDYYEDLSVEDTKEIISKLKKDE 727
++ +N Y LS E II K+K E
Sbjct: 145 VMMINGQAYGPLSAEKAIAIIRKIKAAE 172
>UniRef50_Q82TU7 Cluster: Respiratory-chain NADH dehydrogenase 24 Kd
subunit; n=27; Proteobacteria|Rep: Respiratory-chain
NADH dehydrogenase 24 Kd subunit - Nitrosomonas europaea
Length = 162
Score = 105 bits (253), Expect = 2e-21
Identities = 50/141 (35%), Positives = 81/141 (57%)
Frame = +2
Query: 269 KRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFY 448
++++ +A YP K+ A++ L +AQ + G WL M +A+ L +P + VYEVATFY
Sbjct: 12 RKIDREVAKYPADRKQSAVMSALAIAQDEKG-WLATETMDFIADYLEMPAIAVYEVATFY 70
Query: 449 TMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGA 628
M+ +P+GKY + VCT PC L G + + +KQ+ + G F++ E EC+G+
Sbjct: 71 NMYNLKPVGKYKLTVCTNLPCALSGGNQTADYLKQKLGIGFNETTTDGLFTLKEGECMGS 130
Query: 629 CVNAPMIQVNDDYYEDLSVED 691
C +AP++ VN+ ED
Sbjct: 131 CGDAPVLLVNNKRMCSFMTED 151
>UniRef50_Q8ABI7 Cluster: NADH-ubiquinone oxidoreductase subunit;
n=3; Bacteroides|Rep: NADH-ubiquinone oxidoreductase
subunit - Bacteroides thetaiotaomicron
Length = 158
Score = 104 bits (250), Expect = 4e-21
Identities = 52/138 (37%), Positives = 78/138 (56%)
Frame = +2
Query: 305 GHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYH 484
G+ G +I +L AQ G +LP +A L +P +VY V TFYT F P GK+
Sbjct: 22 GNNAGELINILHEAQHLHG-YLPEEMQRIIASKLRIPVSKVYGVVTFYTFFTMTPKGKHP 80
Query: 485 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 664
+ VC T C++RGS+ +L K+ EVG +P GK+S+ + C+GAC AP++ + +
Sbjct: 81 ISVCMGTACYVRGSEKLLEEFKRVLGIEVGETTPDGKYSLDCLRCVGACGLAPVVMIGEK 140
Query: 665 YYEDLSVEDTKEIISKLK 718
Y L D K+II +L+
Sbjct: 141 VYGRLQPVDVKKIIEELE 158
>UniRef50_A7CUG1 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Opitutaceae bacterium TAV2|Rep: NADH-quinone
oxidoreductase, E subunit - Opitutaceae bacterium TAV2
Length = 163
Score = 104 bits (250), Expect = 4e-21
Identities = 50/151 (33%), Positives = 91/151 (60%)
Frame = +2
Query: 269 KRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFY 448
+R++ ++ YP KR A +PLL L Q + G++ AM +A+ L + ++ V EV TFY
Sbjct: 9 QRIDEVITHYPV--KRSATLPLLHLIQ-EDAGYISDEAMEWIADKLGIERIHVLEVVTFY 65
Query: 449 TMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGA 628
MF R+PIG+ H++VC T C L G + +++E + + SP G+ +V VECL +
Sbjct: 66 PMFRRKPIGRRHIKVCRTLSCALMGGYKVCETMQKEFDTHLNEVSPDGEVTVEFVECLAS 125
Query: 629 CVNAPMIQVNDDYYEDLSVEDTKEIISKLKK 721
C AP++ +++ +E+++ +E+ + +K+
Sbjct: 126 CGTAPVVMIDETLHENVTPARARELAALIKQ 156
>UniRef50_A0UV12 Cluster: NADH-quinone oxidoreductase, E subunit;
n=8; Bacteria|Rep: NADH-quinone oxidoreductase, E
subunit - Clostridium cellulolyticum H10
Length = 163
Score = 104 bits (250), Expect = 4e-21
Identities = 50/135 (37%), Positives = 79/135 (58%)
Frame = +2
Query: 314 RGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 493
RGA+IP+L Q + G+L + +++E LN+ +Y V TFYT F P G++ + +
Sbjct: 29 RGALIPVLHEVQ-EVYGYLSEDVLKEISEKLNVSLAEIYGVVTFYTQFSLNPKGRFKINI 87
Query: 494 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 673
C T C+++GS IL K++ +VG + GKFS+ C+GAC AP+I +NDD +
Sbjct: 88 CMGTACYVKGSGEILEKFKEKLGIDVGQCTEDGKFSLDACRCIGACGLAPVIMINDDVHG 147
Query: 674 DLSVEDTKEIISKLK 718
L +D + I+ K K
Sbjct: 148 RLLPDDVEAILEKYK 162
>UniRef50_Q092T1 Cluster: NADH-ubiquinone oxidoreductase 24 kDa
subunit; n=2; Cystobacterineae|Rep: NADH-ubiquinone
oxidoreductase 24 kDa subunit - Stigmatella aurantiaca
DW4/3-1
Length = 162
Score = 104 bits (249), Expect = 6e-21
Identities = 56/159 (35%), Positives = 89/159 (55%), Gaps = 4/159 (2%)
Frame = +2
Query: 251 FSQANQKRVEA----LLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPK 418
F+ QK+ +A +L+ YP K M+P L L Q G W P + VA+ L +
Sbjct: 6 FTPEEQKKFDAGISEILSHYPPDRKSAGMLPALRLLQDLKG-WCPPEGIRLVAKNLEVTP 64
Query: 419 MRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKF 598
R YEVA+FY M+ + GKY + VCT C LRG++ +L ++ + + G + F
Sbjct: 65 ERAYEVASFYVMYHLKKPGKYTIDVCTNLSCSLRGAEKMLAYLENKLGLKAGEANE--TF 122
Query: 599 SVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKL 715
++ E ECL +C AP +QVN+D++E+L+ E+++KL
Sbjct: 123 TLRETECLASCGTAPCLQVNEDHHENLTKARVDELLAKL 161
>UniRef50_A4J528 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Desulfotomaculum reducens MI-1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Desulfotomaculum reducens MI-1
Length = 158
Score = 103 bits (248), Expect = 7e-21
Identities = 52/150 (34%), Positives = 89/150 (59%)
Frame = +2
Query: 263 NQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVAT 442
NQ +++AL A Y +G+ G ++ + A ++S G+LP + + AE L +P VY VAT
Sbjct: 10 NQSKLDALFAQY-KGNPNGLIVVMA--AIQESQGYLPKDLLVRTAEELGVPLSDVYGVAT 66
Query: 443 FYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECL 622
FY F RP G++ V +C T C+++G+ + + +++E + G + +FS+ V CL
Sbjct: 67 FYAAFSLRPRGRHSVNLCLGTACYVKGAPEVQSMLEKEMGIKAGNTTEDRRFSLDLVRCL 126
Query: 623 GACVNAPMIQVNDDYYEDLSVEDTKEIISK 712
GAC AP++ VN + Y ++ E E++SK
Sbjct: 127 GACGIAPVLTVNGEVYPRMTAEKVTEVLSK 156
>UniRef50_Q67P18 Cluster: NADH dehydrogenase I subunit E; n=1;
Symbiobacterium thermophilum|Rep: NADH dehydrogenase I
subunit E - Symbiobacterium thermophilum
Length = 274
Score = 103 bits (247), Expect = 1e-20
Identities = 58/167 (34%), Positives = 92/167 (55%), Gaps = 3/167 (1%)
Frame = +2
Query: 242 PFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQ-SGGWLPISAMHKVAEILNLPK 418
P + + + VEA+L YPEG +R A++PLL LA R+ G ++ S + VAEI +
Sbjct: 7 PPRWPETCKDEVEAILRRYPEGRERSAILPLLHLAMREREGRYIAQSDIEAVAEICGVAP 66
Query: 419 MRVYEVATFYTMFIRRPIGKYHVQVCTTTPC-WLRGSDAILNAIKQETNCEVGGNSPCGK 595
V V +FYTMF R+P+GKY + VC C L G ++ +++ +VG +P G
Sbjct: 67 SYVQSVCSFYTMFRRQPVGKYLITVCGNMACHLLAGGSQLVEHMEKTLGIKVGETTPDGL 126
Query: 596 FSVSEV-ECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKP 733
++ ECL AC AP+I V+ +Y ++ E +++ L+ E P
Sbjct: 127 ITLEVTGECLAACDLAPVIHVDTEYVVKVTREKFDALVAALRAGEGP 173
>UniRef50_Q8RBD2 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=3; Thermoanaerobacter|Rep: NADH:ubiquinone
oxidoreductase 24 kD subunit - Thermoanaerobacter
tengcongensis
Length = 169
Score = 101 bits (243), Expect = 3e-20
Identities = 45/134 (33%), Positives = 81/134 (60%)
Frame = +2
Query: 317 GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVC 496
G++I +++ AQ + G+LPI +++ + +P ++ ++TFY+ F +P GKY + +C
Sbjct: 37 GSLIAVMNDAQ-EIFGYLPIEVQLFISQEMKVPLTEIFGISTFYSRFTLKPSGKYKINLC 95
Query: 497 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 676
T C++RG+ +L IK++ EVG + GKFS+ CLGAC AP++ +N + +
Sbjct: 96 MGTACYVRGAAMLLEKIKEKLGIEVGETTEDGKFSLEPTRCLGACALAPVMMINGEVFGR 155
Query: 677 LSVEDTKEIISKLK 718
L+ D EI+ K +
Sbjct: 156 LTPNDVDEILKKFE 169
>UniRef50_A3ERJ3 Cluster: NADH ubiquinone oxidoreductase 24 kD
subunit; n=2; Leptospirillum|Rep: NADH ubiquinone
oxidoreductase 24 kD subunit - Leptospirillum sp. Group
II UBA
Length = 168
Score = 101 bits (243), Expect = 3e-20
Identities = 47/146 (32%), Positives = 85/146 (58%)
Frame = +2
Query: 308 HKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHV 487
++ GA++ +L Q + G ++P A+ V EIL +PK ++Y V TFY+ F + P GK+ +
Sbjct: 23 NREGAVVQILQKVQEKYG-YVPADALEFVGEILEIPKSKMYGVLTFYSQFYQEPRGKFVL 81
Query: 488 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 667
++C T C +RG+ +++ +K+E + E G N+ F++ V CLG+C APM V
Sbjct: 82 KICVGTACHVRGAGLLVDKVKEELHIEPGENTEDMLFTLEPVACLGSCALAPMAMVQGTA 141
Query: 668 YEDLSVEDTKEIISKLKKDEKPKPGP 745
Y LS + +I + +++ + + P
Sbjct: 142 YGKLSADKMVSLIRQFEEEAEKEEEP 167
>UniRef50_Q1EVZ9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Clostridium oremlandii OhILAs|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Clostridium
oremlandii OhILAs
Length = 166
Score = 101 bits (242), Expect = 4e-20
Identities = 52/152 (34%), Positives = 86/152 (56%)
Frame = +2
Query: 257 QANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEV 436
Q N ++A A+ GA+IP L Q G+LP A+ V+E L++P ++Y V
Sbjct: 13 QTNSTMLKAKEALQDIKGTEGALIPALHKIQ-SIYGYLPEEALILVSEELDIPITQIYGV 71
Query: 437 ATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVE 616
A+FY++F P G++ + VC T C+++GS IL + E N + G + GKF++
Sbjct: 72 ASFYSLFSLEPKGQHVISVCLGTACYVKGSQNILERLSSELNIQEGNTTEDGKFTLQATR 131
Query: 617 CLGACVNAPMIQVNDDYYEDLSVEDTKEIISK 712
C+GAC AP+I +++ Y L+ D +I+S+
Sbjct: 132 CIGACGLAPVIMIDEKVYGRLTPSDVPKILSE 163
>UniRef50_Q5JIQ1 Cluster: NADH:ubiquinone oxidoreductase, subunit E;
n=2; cellular organisms|Rep: NADH:ubiquinone
oxidoreductase, subunit E - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 154
Score = 101 bits (242), Expect = 4e-20
Identities = 49/134 (36%), Positives = 78/134 (58%)
Frame = +2
Query: 320 AMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCT 499
++IPLL Q + G +LP + ++A L +P RVY VATFY F P+GKY V+VC
Sbjct: 17 SLIPLLQRTQERFG-YLPREVLEEIANYLGIPLSRVYGVATFYAQFRFEPLGKYVVKVCH 75
Query: 500 TTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDL 679
T C + G+ I A+K+E E G + G ++ V CLG C AP+I +N+ + L
Sbjct: 76 GTACHVNGAVNIAQALKEELGIEEGQTTEDGLVTLERVACLGCCSLAPVIMINEKVFGKL 135
Query: 680 SVEDTKEIISKLKK 721
+ + ++++ +LK+
Sbjct: 136 TPDKVRKLVKQLKE 149
>UniRef50_A6PRE1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Victivallis vadensis ATCC BAA-548|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Victivallis vadensis ATCC BAA-548
Length = 176
Score = 100 bits (240), Expect = 7e-20
Identities = 47/132 (35%), Positives = 79/132 (59%)
Frame = +2
Query: 311 KRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQ 490
+RG++I +L AQ G +L VA LN+ + VY V +FY+ FI +PIG+Y +
Sbjct: 41 RRGSLIQILHRAQHLFG-YLSEEVQSFVAARLNISRAEVYGVISFYSYFIDQPIGRYKIN 99
Query: 491 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 670
VCT T C+++G+ +L+ K+ G ++P GKF + + C+GAC AP++ VN+ Y
Sbjct: 100 VCTGTACFVKGAPKVLDEFKRRLEIREGESTPDGKFFLGALRCVGACSLAPVVMVNEKVY 159
Query: 671 EDLSVEDTKEII 706
+++ E +I+
Sbjct: 160 GNVTAEKVADIL 171
>UniRef50_Q6MDR2 Cluster: Putative NADH-ubiquinone oxidoreductase
chain E; n=1; Candidatus Protochlamydia amoebophila
UWE25|Rep: Putative NADH-ubiquinone oxidoreductase chain
E - Protochlamydia amoebophila (strain UWE25)
Length = 159
Score = 100 bits (239), Expect = 9e-20
Identities = 51/143 (35%), Positives = 79/143 (55%)
Frame = +2
Query: 293 IYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPI 472
+YP +KR A+IP L LAQ + G +LPI +++A + +L V + TFY MF P+
Sbjct: 4 LYP--NKRSALIPALHLAQAEKG-YLPIEVQNELAFLFDLEPSEVNSIVTFYDMFFEEPV 60
Query: 473 GKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQ 652
GK+ + VC C LRG+D L + Q+ + G + G+F+V ECL AC AP++
Sbjct: 61 GKHVIHVCKNISCMLRGADGFLARLCQKMHISPGETTQDGEFTVIASECLAACDKAPVMI 120
Query: 653 VNDDYYEDLSVEDTKEIISKLKK 721
V+D + + + I K K+
Sbjct: 121 VDDKVIGPVEITQIDDYIQKAKQ 143
>UniRef50_Q9WXM7 Cluster: NADP-reducing hydrogenase, subunit A; n=4;
Thermotogaceae|Rep: NADP-reducing hydrogenase, subunit A
- Thermotoga maritima
Length = 176
Score = 99 bits (238), Expect = 1e-19
Identities = 50/139 (35%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
Frame = +2
Query: 311 KRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQ 490
K+ A+I +L AQ + G+LP + +++ L++P +VY V TFY F +P GK+ ++
Sbjct: 38 KKDALIQVLHKAQ-ELFGYLPADVLEYISDKLDVPLSKVYGVVTFYNFFSTKPKGKHQIK 96
Query: 491 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVN-DDY 667
VC T C+++G+D I +E + G FSV V CLGAC AP++ V+ DD+
Sbjct: 97 VCLGTACYVKGADRIFERFLEELKVNPDEPTSDGMFSVHGVRCLGACSMAPVVMVDEDDF 156
Query: 668 YEDLSVEDTKEIISKLKKD 724
Y ++ + +IISK K++
Sbjct: 157 YGRVTPDMVPQIISKYKRE 175
>UniRef50_Q1IS36 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Acidobacteria bacterium Ellin345|Rep: NADH-quinone
oxidoreductase, E subunit - Acidobacteria bacterium
(strain Ellin345)
Length = 160
Score = 99 bits (238), Expect = 1e-19
Identities = 54/146 (36%), Positives = 82/146 (56%), Gaps = 3/146 (2%)
Frame = +2
Query: 302 EGH---KRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPI 472
+GH KR ++P L Q + G +L A+ ++A + L + V V ++Y+M +PI
Sbjct: 15 QGHYPTKRSPLVPFLLYVQDEVG-YLSDEAIVEIANRVELTPLEVRNVISYYSMLRTKPI 73
Query: 473 GKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQ 652
GKY+VQVCT C RG + I K+ +P G FS+ EVEC+GAC AP +Q
Sbjct: 74 GKYNVQVCTNICCLQRGGEDIFEHCKKTLGIGHKQTTPDGLFSLEEVECIGACSWAPAVQ 133
Query: 653 VNDDYYEDLSVEDTKEIISKLKKDEK 730
VN D++E+L+ E +I +K E+
Sbjct: 134 VNYDFHENLTPETMDAVIESYRKREQ 159
>UniRef50_A3THI9 Cluster: ATP synthase subunit E; n=3;
Actinomycetales|Rep: ATP synthase subunit E - Janibacter
sp. HTCC2649
Length = 417
Score = 99.1 bits (236), Expect = 2e-19
Identities = 61/186 (32%), Positives = 96/186 (51%), Gaps = 6/186 (3%)
Frame = +2
Query: 278 EALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMF 457
E ++A YP+ KR A++PLL L Q G ++ + AE+L L + V VATFYT +
Sbjct: 36 ELVVAKYPQ--KRSALLPLLHLVQSVDG-YVTGRGIDFCAEVLELSRAEVSGVATFYTQY 92
Query: 458 IRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVN 637
R P G+Y V VCT T C + G D I +++ + + GK ++ +EC AC
Sbjct: 93 KRHPNGEYTVGVCTNTLCAIMGGDEIWDSVSEHLGIGHDETTDDGKVTLERIECNAACDY 152
Query: 638 APMIQVNDDYYEDLSVEDTKEIISKLKKDE--KPKPGPR---SGRFASEPLGGLT-SLTE 799
AP++ N +++++ + E T +++ L+ KP GP S + S L G L +
Sbjct: 153 APVVMANWEFFDNQTPESTNQLVDDLRAGTPVKPTRGPNSLCSFKQMSRVLAGFNDGLAD 212
Query: 800 EPTGPG 817
E G G
Sbjct: 213 EGVGAG 218
>UniRef50_A4J9N9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=11; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Desulfotomaculum reducens
MI-1
Length = 177
Score = 98.7 bits (235), Expect = 3e-19
Identities = 48/132 (36%), Positives = 75/132 (56%)
Frame = +2
Query: 314 RGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 493
+GA+I +L AQ G +LP +A L +P VY V +FY+ F +P GK+ + V
Sbjct: 36 KGALIEILHKAQHIFG-YLPRDVQLFIARKLGIPGAEVYGVVSFYSYFTTKPSGKHTISV 94
Query: 494 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 673
C T C++RG+D I+ K+ E + G F++ +V C+GAC AP++ V+D Y
Sbjct: 95 CMGTACFVRGADKIVEKFKERLGIESNETTEDGLFTIKDVRCIGACGLAPVVMVDDKVYG 154
Query: 674 DLSVEDTKEIIS 709
+ VED +II+
Sbjct: 155 RVKVEDVDDIIN 166
>UniRef50_A1HP41 Cluster: NADH-quinone oxidoreductase, E subunit;
n=9; Bacteria|Rep: NADH-quinone oxidoreductase, E
subunit - Thermosinus carboxydivorans Nor1
Length = 166
Score = 98.3 bits (234), Expect = 4e-19
Identities = 54/147 (36%), Positives = 87/147 (59%)
Frame = +2
Query: 272 RVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYT 451
+++ +LA Y +G K GA+IP+L AQ + G+L + +AE L++P ++Y V TFY
Sbjct: 21 QLDEILAKY-QGVK-GALIPVLQEAQN-AYGYLSKEVIEYIAEKLDIPVSQIYGVVTFYA 77
Query: 452 MFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGAC 631
F P G+ ++VC T C +RG+ AIL A++ GG + KF++ V C+GAC
Sbjct: 78 QFHLNPRGRNIIRVCQGTACHVRGAKAILKALEDNLKITAGGTTADLKFTLETVACIGAC 137
Query: 632 VNAPMIQVNDDYYEDLSVEDTKEIISK 712
AP++ +NDD + L+ E I++K
Sbjct: 138 GLAPVMMINDDTHGRLTPEVIPSILAK 164
>UniRef50_P65574 Cluster: NADH-quinone oxidoreductase subunit E;
n=23; Actinomycetales|Rep: NADH-quinone oxidoreductase
subunit E - Mycobacterium bovis
Length = 252
Score = 98.3 bits (234), Expect = 4e-19
Identities = 61/184 (33%), Positives = 95/184 (51%), Gaps = 6/184 (3%)
Frame = +2
Query: 284 LLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIR 463
++ YP+ +R A++PLL L Q + +L + + A+ L L V VA+FYTM+ R
Sbjct: 47 IIGRYPD--RRSALLPLLHLVQGEDS-YLTPAGLRFCADQLGLTGAEVSAVASFYTMYRR 103
Query: 464 RPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAP 643
RP G+Y V VCT T C + G DAI + +K+ + G ++ +EC AC AP
Sbjct: 104 RPTGEYLVGVCTNTLCAVMGGDAIFDRLKEHLGVGHDETTSDGVVTLQHIECNAACDYAP 163
Query: 644 MIQVNDDYYEDLSVEDTKEIISKLKKDEKPKP---GPRSG-RFASEPLGGLTSL--TEEP 805
++ VN +++++ + E +E++ L+ D P P G R S L GL E
Sbjct: 164 VVMVNWEFFDNQTPESARELVDSLRSDTPKAPTRGAPLCGFRQTSRILAGLPDQRPDEGQ 223
Query: 806 TGPG 817
GPG
Sbjct: 224 GGPG 227
>UniRef50_P0AFD3 Cluster: NADH-quinone oxidoreductase subunit E;
n=66; Gammaproteobacteria|Rep: NADH-quinone
oxidoreductase subunit E - Shigella flexneri
Length = 166
Score = 97.9 bits (233), Expect = 5e-19
Identities = 48/158 (30%), Positives = 88/158 (55%)
Frame = +2
Query: 245 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 424
FE S A ++ +E + Y + R A I L + Q+Q G W+P A+H +A++L +P
Sbjct: 12 FELSAAEREAIEHEMHHYED--PRAASIEALKIVQKQRG-WVPDGAIHAIADVLGIPASD 68
Query: 425 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSV 604
V VATFY+ R+P+G++ ++ C + C + G I A++++ N + G + G+F++
Sbjct: 69 VEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGYQGIQAALEKKLNIKPGQTTFDGRFTL 128
Query: 605 SEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLK 718
CLG C P + +++D + L+ E E++ + K
Sbjct: 129 LPTCCLGNCDKGPNMMIDEDTHAHLTPEAIPELLERYK 166
>UniRef50_O66842 Cluster: NADH-quinone oxidoreductase subunit E;
n=2; Aquifex aeolicus|Rep: NADH-quinone oxidoreductase
subunit E - Aquifex aeolicus
Length = 160
Score = 97.5 bits (232), Expect = 6e-19
Identities = 53/156 (33%), Positives = 86/156 (55%)
Frame = +2
Query: 245 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 424
FEF + + +++ + +P+ KR A++ L Q G ++P ++ +A++L LP
Sbjct: 6 FEFPEELKTKLQEHINYFPK--KRQAILLCLHEIQNYYG-YIPPESLKPLADMLELPLNH 62
Query: 425 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSV 604
V V FY MF R KY ++VC + C L G++ +L A++ + G +P GKF +
Sbjct: 63 VEGVVAFYDMFDREDKAKYRIRVCVSIVCHLMGTNKLLKALENILGIKPGEVTPDGKFKI 122
Query: 605 SEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISK 712
V+CLGAC AP+ VNDD Y+ S EI+S+
Sbjct: 123 VPVQCLGACSEAPVFMVNDDEYKFESEVQLNEILSR 158
>UniRef50_Q3ZXM4 Cluster: Hydrogenase subunit HymA; n=13; cellular
organisms|Rep: Hydrogenase subunit HymA -
Dehalococcoides sp. (strain CBDB1)
Length = 161
Score = 95.9 bits (228), Expect = 2e-18
Identities = 48/133 (36%), Positives = 77/133 (57%)
Frame = +2
Query: 311 KRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQ 490
K +I +L Q++ WLP A++KV++ LN+P RVY VATFY +F P GK++V
Sbjct: 27 KADMLIQVLLKIQKEYN-WLPKEALYKVSQTLNVPVNRVYHVATFYKLFSVIPKGKHNVS 85
Query: 491 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 670
VC T C + G+ IL+ +++ + G + KFS+ V CLG C P++ V+ Y+
Sbjct: 86 VCVGTACHVFGAPKILDRLEKSLGIKAGETTSDLKFSLETVNCLGCCALGPVVVVDGHYH 145
Query: 671 EDLSVEDTKEIIS 709
L D ++I++
Sbjct: 146 GKLPTADAEKILA 158
>UniRef50_Q2LYE8 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit NuoE; n=1; Syntrophus aciditrophicus SB|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit NuoE -
Syntrophus aciditrophicus (strain SB)
Length = 173
Score = 95.1 bits (226), Expect = 3e-18
Identities = 45/155 (29%), Positives = 90/155 (58%)
Frame = +2
Query: 257 QANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEV 436
+ ++ ++ +++ Y +G K A+ L DL ++ +LP A+ V++ L +P R+YE+
Sbjct: 17 EVDRGKIREIISKY-DGEKSAAVAVLQDL--QEEFRYLPKEALTIVSDELQVPLSRIYEI 73
Query: 437 ATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVE 616
ATFY +F +P GKY ++VC T C ++G ++N +++ N G + F++ EV
Sbjct: 74 ATFYNVFSLKPRGKYLIEVCAGTACHVQGGFNLMNRLERNLNISCGETTEDAMFTLEEVR 133
Query: 617 CLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKK 721
CLG C AP+++++ + + L+ ++ I+ +K
Sbjct: 134 CLGCCSLAPVVRIDGNIHPYLTQDEIPGILKNYRK 168
>UniRef50_Q1PYY2 Cluster: Similar to nuoE subunit of the
NADH:ubiquinone oxidoreductase; n=2; Candidatus Kuenenia
stuttgartiensis|Rep: Similar to nuoE subunit of the
NADH:ubiquinone oxidoreductase - Candidatus Kuenenia
stuttgartiensis
Length = 162
Score = 95.1 bits (226), Expect = 3e-18
Identities = 47/128 (36%), Positives = 76/128 (59%)
Frame = +2
Query: 323 MIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTT 502
+IP+L Q + G +LP++AM +V+ ++P R+Y V TFY+ F + P GK+ V++C
Sbjct: 33 LIPILQEMQEEYG-YLPLTAMEEVSVRTDIPLSRIYGVVTFYSQFSQVPRGKHTVRLCAG 91
Query: 503 TPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLS 682
T C ++G+ I I + G +P KF+ V CLG C AP++ ++D YY L+
Sbjct: 92 TACHIKGAPDIGEKIADVLQVKEGETTPDYKFTHKTVACLGTCFLAPVMMIDDRYYGKLT 151
Query: 683 VEDTKEII 706
E T+EI+
Sbjct: 152 EEKTEEIL 159
>UniRef50_Q2RHR8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Moorella thermoacetica ATCC 39073|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Moorella thermoacetica (strain ATCC 39073)
Length = 157
Score = 94.3 bits (224), Expect = 6e-18
Identities = 46/131 (35%), Positives = 77/131 (58%)
Frame = +2
Query: 320 AMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCT 499
A+I +L +Q + G+LP + +A+ L L +VY V +FY F +P GKY V VC
Sbjct: 26 ALIEVLHQSQ-ELVGYLPRNVQVAIADGLGLSLSQVYSVVSFYNHFTTKPKGKYQVSVCM 84
Query: 500 TTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDL 679
T C+++G+ AIL ++QE +VG + G+F++++V CLG C P++ VN + L
Sbjct: 85 GTACFVKGAPAILERLEQELGTKVGDTTADGRFTINQVRCLGCCALGPVMTVNQKAHGRL 144
Query: 680 SVEDTKEIISK 712
+ + EI+ +
Sbjct: 145 TPDTALEILKE 155
>UniRef50_Q1PWG7 Cluster: Similar to to proton-translocating NADH
dehydrogenase I, 24 kDa subunit; n=1; Candidatus
Kuenenia stuttgartiensis|Rep: Similar to to
proton-translocating NADH dehydrogenase I, 24 kDa
subunit - Candidatus Kuenenia stuttgartiensis
Length = 164
Score = 93.9 bits (223), Expect = 8e-18
Identities = 48/137 (35%), Positives = 78/137 (56%)
Frame = +2
Query: 308 HKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHV 487
H RG++IP+L Q + G+LP + V+E LN+ + VATFY F RP G++ +
Sbjct: 28 HGRGSLIPILQTIQT-AYGYLPEKVVDFVSERLNISVNEIIGVATFYAQFHMRPRGRHII 86
Query: 488 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 667
+ C+ T C ++G+ I+ + ++ + VG + F++ EV CLGAC AP+I V++D
Sbjct: 87 KACSGTACHVKGAKQIIEKLGKKLDIPVGETTKDTMFTLEEVACLGACSLAPVIMVDEDV 146
Query: 668 YEDLSVEDTKEIISKLK 718
Y L II ++K
Sbjct: 147 YGQLLHNTVGNIIDEIK 163
>UniRef50_A5D2H5 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=1; Pelotomaculum thermopropionicum SI|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit -
Pelotomaculum thermopropionicum SI
Length = 192
Score = 93.5 bits (222), Expect = 1e-17
Identities = 47/139 (33%), Positives = 76/139 (54%)
Frame = +2
Query: 314 RGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 493
+G +I +L AQ G+LP +AE L +P V V TFY++F RP GKY + V
Sbjct: 49 KGQLIRILQKAQ-DIFGYLPDDVQAFIAERLRVPVAEVNGVVTFYSLFSTRPKGKYIINV 107
Query: 494 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 673
C T C+++G+ +++A+K+ + G +P G F++ C+GAC AP++ VN
Sbjct: 108 CMGTACYVKGAQQVMDALKKRLKIDEGETTPDGLFTLKSTRCVGACGLAPILAVNGKVQG 167
Query: 674 DLSVEDTKEIISKLKKDEK 730
+ +E+I +K EK
Sbjct: 168 MVDPGKIQELIKNCRKGEK 186
>UniRef50_Q746S5 Cluster: NADH dehydrogenase I, E subunit; n=4;
Desulfuromonadales|Rep: NADH dehydrogenase I, E subunit
- Geobacter sulfurreducens
Length = 162
Score = 93.1 bits (221), Expect = 1e-17
Identities = 46/132 (34%), Positives = 73/132 (55%)
Frame = +2
Query: 314 RGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 493
R A + ++ QR G WL A+ + AE+L L ++V E+ATFY M RRP+GK + V
Sbjct: 21 REAAVDVMKALQRHYG-WLTDEAVGEAAELLGLTPLQVEELATFYEMIYRRPVGKRVIHV 79
Query: 494 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 673
C + CW G ++++ + N E GG + G F++ CLG C AP + V D +
Sbjct: 80 CDSISCWALGGESLMAHLAAALNIEPGGTTADGLFTLLPCCCLGNCGEAPTLMVGDTLHG 139
Query: 674 DLSVEDTKEIIS 709
+++E EI++
Sbjct: 140 RVTLERAGEILA 151
>UniRef50_Q67JG1 Cluster: Putative iron hydrogenase small subunit
gamma; n=3; Firmicutes|Rep: Putative iron hydrogenase
small subunit gamma - Symbiobacterium thermophilum
Length = 186
Score = 92.7 bits (220), Expect = 2e-17
Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 3/143 (2%)
Frame = +2
Query: 323 MIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTT 502
+I +L AQ + G+LP VA L++P VY V TFY F P+GKY + VC
Sbjct: 34 LIAVLHKAQ-EIFGFLPEEVQRHVAAALHVPPSEVYGVVTFYNYFTLTPVGKYPINVCMG 92
Query: 503 TPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLS 682
T C+++G+ +L+ ++E + G +P G FS+ CLGAC AP++ V + + L+
Sbjct: 93 TACYVQGAGRLLSLFERELGIQPGQVTPDGLFSLEVCRCLGACGLAPVVTVAGEVHGKLT 152
Query: 683 VEDTKEIISKLKK---DEKPKPG 742
D +++++L++ E+P+ G
Sbjct: 153 ESDALKLVAELRQRAAAEQPQAG 175
>UniRef50_Q1PW48 Cluster: Similar to NADH:ubiquinone oxidoreductase
24 kDa subunit, mitochondrial; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Similar to NADH:ubiquinone
oxidoreductase 24 kDa subunit, mitochondrial -
Candidatus Kuenenia stuttgartiensis
Length = 152
Score = 92.7 bits (220), Expect = 2e-17
Identities = 49/154 (31%), Positives = 81/154 (52%)
Frame = +2
Query: 263 NQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVAT 442
+Q V+ L I G+ + A IP+L Q + G +LP+ + +V E + K +Y VAT
Sbjct: 2 SQSNVKKYLEIC--GNTKEASIPILQSIQEEYG-YLPLDVLDQVCEESEITKSHLYGVAT 58
Query: 443 FYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECL 622
FY F P G+ ++VC T C ++G+D + A+K + ++ + G FS+ V CL
Sbjct: 59 FYAQFKLTPKGRNAIKVCKGTACHVKGADITIVAMKDQLGIDIDQTTEDGAFSMETVACL 118
Query: 623 GACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKD 724
G C AP+I +N+D + S + + K K+
Sbjct: 119 GCCSLAPVIMINEDVFGGFSSAKVRGTLKKYGKE 152
>UniRef50_A1ALP3 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Pelobacter propionicus DSM 2379|Rep: NADH-quinone
oxidoreductase, E subunit - Pelobacter propionicus
(strain DSM 2379)
Length = 154
Score = 91.9 bits (218), Expect = 3e-17
Identities = 46/150 (30%), Positives = 82/150 (54%)
Frame = +2
Query: 266 QKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATF 445
+++ L A YP+ ++P L + + A+ +A L LP M+V E T+
Sbjct: 5 EEKFAQLRATYPKELNSSLVMPFLRIMLDEKKSLGESDAVF-IANYLGLPAMQVKEALTW 63
Query: 446 YTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLG 625
YTMF R P+G + ++VC C L G++ I++ + Q+ + G + G+F++ VECL
Sbjct: 64 YTMFYRHPVGTHVIKVCRNIACSLMGAERIIDHLSQKLGIKPGETTADGRFTLLLVECLA 123
Query: 626 ACVNAPMIQVNDDYYEDLSVEDTKEIISKL 715
+C AP++Q++D Y+E L+ +I+ L
Sbjct: 124 SCGTAPVMQIDDTYHEQLTEAKIDQILKGL 153
>UniRef50_Q3A461 Cluster: NADP-reducing hydrogenase chain A; n=5;
Deltaproteobacteria|Rep: NADP-reducing hydrogenase chain
A - Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 173
Score = 90.6 bits (215), Expect = 7e-17
Identities = 44/133 (33%), Positives = 76/133 (57%)
Frame = +2
Query: 311 KRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQ 490
K G ++ +L AQ G +LP VA+ + + +VY V +FYT F P GK+ +
Sbjct: 39 KEGHLVTVLHKAQSLFG-YLPKEVQEFVADHMEVSLAQVYGVVSFYTFFTMIPKGKHPIS 97
Query: 491 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 670
VC T C+++G+D +++A K + V + GKFS+ + C+GAC AP++ V + Y
Sbjct: 98 VCMGTACFVKGADKVVDAFKNQLGVTVSEVTRDGKFSIDCLRCVGACALAPVVLVGEKVY 157
Query: 671 EDLSVEDTKEIIS 709
+++ + K+II+
Sbjct: 158 ANVTPDQVKDIIA 170
>UniRef50_Q2AG84 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Halothermothrix orenii H
168
Length = 167
Score = 90.2 bits (214), Expect = 1e-16
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 1/157 (0%)
Frame = +2
Query: 248 EFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRV 427
E ++ N RV + I G + +IP+L Q++ +LP + +A +++L V
Sbjct: 5 EAARHNFTRVNEI--IEKHGKDQSKLIPILQEVQKEYR-YLPEEILTYIATVMDLSPATV 61
Query: 428 YEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGG-NSPCGKFSV 604
Y VATFY F P GKY + VC T C + GS +LNAI+++ N E G + F+V
Sbjct: 62 YGVATFYAQFSLDPKGKYVINVCDGTACHVSGSLPVLNAIRKKLNLEDGKFTTDDLMFTV 121
Query: 605 SEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKL 715
V CLGAC AP++ +N Y ++ E + II +L
Sbjct: 122 ETVSCLGACGLAPVVTINGKVYGKMTPEAIEVIIDEL 158
>UniRef50_A0LJN9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=3; Deltaproteobacteria|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 163
Score = 89.8 bits (213), Expect = 1e-16
Identities = 41/118 (34%), Positives = 65/118 (55%)
Frame = +2
Query: 362 GWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILN 541
G++ AM + A IL + + + E+ATFY R P+G+Y + VC + CW+ G I++
Sbjct: 36 GYMTDEAMEEAAGILGMTTLELEELATFYDHIYRSPVGRYVIHVCDSAVCWMEGYQRIID 95
Query: 542 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKL 715
+ Q VGG SP G F++ V C+G C AP + +N + Y L+ E I+ +L
Sbjct: 96 YLCQRLKLTVGGTSPDGLFTLLPVCCIGYCDRAPAMMINRNVYGRLTREKIDRILDRL 153
>UniRef50_Q0AVX7 Cluster: Fe-hydrogenase, gamma subunit; n=4;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
Fe-hydrogenase, gamma subunit - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 148
Score = 89.4 bits (212), Expect = 2e-16
Identities = 39/134 (29%), Positives = 77/134 (57%)
Frame = +2
Query: 317 GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVC 496
G +I Q++ ++P A+ A++ ++P+ + Y VATFY+ P GK +++C
Sbjct: 16 GGIIEAYHAVQKEYS-YIPEDAVVYAAQVFDIPEAKAYGVATFYSYLKVGPRGKNVIRIC 74
Query: 497 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 676
+ PC + G+D ++ A+++E ++G +P GKF++ EC+G C P+I +N Y D
Sbjct: 75 ESAPCHIAGADKVVAALEKELGIKMGETTPDGKFTLEFAECVGQCQATPVITINSQPYGD 134
Query: 677 LSVEDTKEIISKLK 718
++ + I+++ K
Sbjct: 135 VTADKIAAILTEYK 148
>UniRef50_Q89AU3 Cluster: NADH-quinone oxidoreductase subunit E;
n=1; Buchnera aphidicola (Baizongia pistaciae)|Rep:
NADH-quinone oxidoreductase subunit E - Buchnera
aphidicola subsp. Baizongia pistaciae
Length = 171
Score = 89.4 bits (212), Expect = 2e-16
Identities = 45/153 (29%), Positives = 83/153 (54%)
Frame = +2
Query: 224 EDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEI 403
E + I +F Q+++E I R ++I +L Q+ S GW+ + ++A I
Sbjct: 8 EMSKKIDIKFKLTIQEKIEIFNIIKNYRTVRSSLIEILKFVQK-SYGWISNELITELACI 66
Query: 404 LNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNS 583
L + K + E+ATFY+ R+PIG+ ++ C + C++ G + I ++++ N VG +
Sbjct: 67 LKISKCDIEEIATFYSQIFRQPIGRNIIKYCDSVVCYVNGCEKIRCSLEKNLNVNVGETT 126
Query: 584 PCGKFSVSEVECLGACVNAPMIQVNDDYYEDLS 682
KF++ + CLG C +P I +NDD Y +++
Sbjct: 127 KDFKFTLLPICCLGNCDKSPTIMINDDLYSNVT 159
>UniRef50_A0LLS9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Syntrophobacter fumaroxidans MPOB|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 151
Score = 88.6 bits (210), Expect = 3e-16
Identities = 47/133 (35%), Positives = 69/133 (51%)
Frame = +2
Query: 311 KRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQ 490
KR A+IP+L Q + G +LP AM A + VY V+TFY F P+G++ V
Sbjct: 15 KRDALIPVLQDIQGEFG-YLPPHAMQAAARHCRTSAVEVYGVSTFYAQFKFSPVGRHTVT 73
Query: 491 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 670
VC T C + G IL K + + G +P G F++ V C+GAC +P + V+ D Y
Sbjct: 74 VCQGTACHVMGGHRILEECKSQLGVQPGQTTPDGMFTLETVACIGACALSPAVVVDKDTY 133
Query: 671 EDLSVEDTKEIIS 709
+ E EI++
Sbjct: 134 GRMKPERITEILN 146
>UniRef50_Q3A640 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=1; Pelobacter carbinolicus DSM 2380|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 159
Score = 88.2 bits (209), Expect = 4e-16
Identities = 44/155 (28%), Positives = 86/155 (55%)
Frame = +2
Query: 248 EFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRV 427
EF++ V+ L+ Y H G +IPLL+ Q G +LP+S ++E ++ R+
Sbjct: 6 EFTKEQIDEVDGLIDRYG-AHPSG-LIPLLEKVQELLG-YLPLSIQEYISEKTHISPNRI 62
Query: 428 YEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVS 607
Y V TFY+ F ++ VQ+C T C+++G+DA++ I+ + G ++ G+F+
Sbjct: 63 YGVVTFYSFFTMEARARHRVQLCLGTACYVKGADAMVEKIENDYQINFGESTEDGRFTFE 122
Query: 608 EVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISK 712
+ C+GAC AP++ ++ + + ++V+ I+ +
Sbjct: 123 KARCVGACGLAPVVIIDGEVFGKVTVDSLDGILEQ 157
>UniRef50_Q6SGN4 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; uncultured bacterium 463|Rep: NADH-quinone
oxidoreductase, E subunit - uncultured bacterium 463
Length = 167
Score = 87.8 bits (208), Expect = 5e-16
Identities = 44/151 (29%), Positives = 79/151 (52%)
Frame = +2
Query: 254 SQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYE 433
SQ + ++A +A P ++ I L + Q G W+ ++ +A L++ +
Sbjct: 14 SQEELQAIDAEIAHVP--YRDAVAIDALKIVQAHRG-WVSDESLSAIAAHLHMSADELDG 70
Query: 434 VATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEV 613
+ATFY + RRP+G + +C + CW++G D + I +E E+G + ++++ V
Sbjct: 71 IATFYNLIYRRPVGDKVILLCNSISCWIKGCDNLQQRITEELGVELGETTSDNRYTLLPV 130
Query: 614 ECLGACVNAPMIQVNDDYYEDLSVEDTKEII 706
CLGAC AP++ V D+ +EDL E I+
Sbjct: 131 TCLGACDKAPVMMVGDELHEDLCEESIIRIL 161
>UniRef50_Q0AWA4 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit NuoE precursor; n=1; Syntrophomonas wolfei
subsp. wolfei str. Goettingen|Rep: NADH:ubiquinone
oxidoreductase 24 kD subunit NuoE precursor -
Syntrophomonas wolfei subsp. wolfei (strain Goettingen)
Length = 166
Score = 87.8 bits (208), Expect = 5e-16
Identities = 41/118 (34%), Positives = 69/118 (58%)
Frame = +2
Query: 365 WLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNA 544
+LP SA+ AE + +P +VY +ATFY F +P G+++++VC T C ++GS+ +L+
Sbjct: 40 YLPRSALELTAEYVGVPFSQVYSMATFYRAFSLQPRGRFNIKVCDGTTCHIKGSNILLDE 99
Query: 545 IKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLK 718
I + G + +FS+ V C+GAC AP + VN+ Y ++ KEII + +
Sbjct: 100 IHKNLGIGPGETTADREFSLETVNCIGACAIAPALLVNERVYPRVNAAALKEIIKEYR 157
>UniRef50_A5FSK9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=3; Dehalococcoides|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Dehalococcoides sp. BAV1
Length = 155
Score = 87.4 bits (207), Expect = 7e-16
Identities = 40/142 (28%), Positives = 79/142 (55%)
Frame = +2
Query: 293 IYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPI 472
I G R +++P L+ Q + G ++P A++ + E L++P + +Y + TFY++
Sbjct: 13 ITQSGSSRLSLLPCLEAVQEECG-YIPHEAVNYLRECLSIPSIDIYGMITFYSLLSTNQK 71
Query: 473 GKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQ 652
GKY +++C + PC+L G++ IL+ + E G + +F++ V CLG C +P +
Sbjct: 72 GKYVIRLCNSLPCYLNGTENILDTLVDNLGIEPGQTTLDRRFTLELVPCLGLCDQSPAMV 131
Query: 653 VNDDYYEDLSVEDTKEIISKLK 718
+N Y L+ + E++ +L+
Sbjct: 132 INGVVYGKLTAQLVTEVLDELR 153
>UniRef50_O27591 Cluster: NADP-reducing hydrogenase, subunit A; n=1;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
NADP-reducing hydrogenase, subunit A - Methanobacterium
thermoautotrophicum
Length = 149
Score = 87.0 bits (206), Expect = 9e-16
Identities = 45/136 (33%), Positives = 73/136 (53%)
Frame = +2
Query: 305 GHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYH 484
GHK +IP+L Q + G+LP A+ +VA + + +Y VATFY F +P G+ H
Sbjct: 14 GHK-SEIIPILQDIQ-DAYGYLPEDALEEVASFTGVSRAHLYGVATFYAQFRFKPRGRKH 71
Query: 485 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 664
+ VCT T C + G++ +L+A+++ E G + ++S+ V C+G C AP VND+
Sbjct: 72 IMVCTGTACHVSGAEQVLDALERHLGIEEGDVTDDMEYSLESVGCIGCCSLAPCAMVNDE 131
Query: 665 YYEDLSVEDTKEIISK 712
+ +I K
Sbjct: 132 VVSRIKPSRVGKIFPK 147
>UniRef50_Q0PIE2 Cluster: NAD(P)H-quinone oxidoreductase 24 kDa
subunit; n=1; Heliobacillus mobilis|Rep: NAD(P)H-quinone
oxidoreductase 24 kDa subunit - Heliobacillus mobilis
Length = 171
Score = 85.8 bits (203), Expect = 2e-15
Identities = 44/143 (30%), Positives = 78/143 (54%)
Frame = +2
Query: 284 LLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIR 463
+L YP+ +R + L D+ + ++P +M +A+ L LP ++Y +ATFY
Sbjct: 15 ILEGYPK-EQRYTLAMLQDIQKEFQ--FIPRESMELIADYLELPLSKIYSLATFYKALSL 71
Query: 464 RPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAP 643
RP GK+ +++C T C +R S + N + G + G+FS+ V CLGAC AP
Sbjct: 72 RPKGKHVIKICDGTACHIRSSQMLANELYTLLKIRPGETTEDGQFSIEMVNCLGACAIAP 131
Query: 644 MIQVNDDYYEDLSVEDTKEIISK 712
+I +++ +Y ++ +EII++
Sbjct: 132 VIVIDETFYGKVTPAKLQEIIAQ 154
>UniRef50_Q608Y0 Cluster: NADH dehydrogenase I, E subunit; n=5;
Bacteria|Rep: NADH dehydrogenase I, E subunit -
Methylococcus capsulatus
Length = 157
Score = 85.4 bits (202), Expect = 3e-15
Identities = 36/135 (26%), Positives = 73/135 (54%)
Frame = +2
Query: 308 HKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHV 487
H A I L++ QR S GW+ + ++AE+L + + +ATFY + RRP+G+ +
Sbjct: 20 HPSAAAIEALNIVQR-SHGWISDELLQEIAELLGMSPAELDSIATFYNLIYRRPVGRRVI 78
Query: 488 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 667
C + CW+ G++ + ++ VG + G++++ + CLGAC AP++ + D+
Sbjct: 79 HYCNSVSCWMLGAEDNRRHLSEKLGIAVGETTGNGEYTLLPIVCLGACDKAPVLMIGDET 138
Query: 668 YEDLSVEDTKEIISK 712
+ ++ +I+ +
Sbjct: 139 HFNVDPARLDDILGE 153
>UniRef50_Q7NZH7 Cluster: NADH-ubiquinone oxidoreductase, chain E;
n=8; Betaproteobacteria|Rep: NADH-ubiquinone
oxidoreductase, chain E - Chromobacterium violaceum
Length = 166
Score = 85.0 bits (201), Expect = 4e-15
Identities = 46/137 (33%), Positives = 75/137 (54%), Gaps = 8/137 (5%)
Frame = +2
Query: 275 VEALLAIYPEGHKRGAMIPLLDLA--QRQSGGWLPISA------MHKVAEILNLPKMRVY 430
++ +A YP KR A++ L +A +R++ G P + + VA L + + Y
Sbjct: 10 IDREVAKYPADQKRSAVMGALRIALDERRAAGETPEARCLNPELIEFVANYLGIAPVAAY 69
Query: 431 EVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSE 610
EVATFY M+ +P+GK+ + VCT PC L G I ++ +G S G +++ E
Sbjct: 70 EVATFYNMYDMKPVGKFKITVCTNLPCALSGGVNAAEYISKKLGIAIGETSADGMYTLLE 129
Query: 611 VECLGACVNAPMIQVND 661
EC+GAC +AP++ VN+
Sbjct: 130 GECMGACGDAPVLLVNN 146
>UniRef50_A4M6K3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Petrotoga mobilis SJ95
Length = 154
Score = 85.0 bits (201), Expect = 4e-15
Identities = 41/123 (33%), Positives = 69/123 (56%)
Frame = +2
Query: 350 RQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 529
+++ G++ + ++A+ ++PK R+Y V +FY+MF P GKY V+VC + C L S
Sbjct: 32 QETYGFISEEDILRIAQKRDIPKARLYGVISFYSMFHLEPTGKYIVRVCDSVSCRLNESA 91
Query: 530 AILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIIS 709
++ A+K E + KF++ ECLG C P++ VND YY L+V +I+
Sbjct: 92 DLVRALKDYLKVEENETTKDKKFTLEVAECLGHCDEGPVMMVNDTYYTHLTVTKAIQILD 151
Query: 710 KLK 718
L+
Sbjct: 152 SLE 154
>UniRef50_A0UVM6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Clostridium cellulolyticum H10|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Clostridium
cellulolyticum H10
Length = 163
Score = 85.0 bits (201), Expect = 4e-15
Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 1/158 (0%)
Frame = +2
Query: 257 QANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSG-GWLPISAMHKVAEILNLPKMRVYE 433
+A ++V +L + G+ + +I ++ Q SG LP + VAE L++P +VY
Sbjct: 5 RAKMEKVREILNRH--GNSKDNLIQVMLELQSMSGTNSLPHEWVVFVAEALDMPVSKVYS 62
Query: 434 VATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEV 613
V TFY+MF P G+Y V+VC + PC + G+ +L ++++ + G + F++ +
Sbjct: 63 VITFYSMFGTEPRGRYLVEVCKSGPCHVSGAKNVLQLLEEKLGIKPGQTTQDRVFTLIQS 122
Query: 614 ECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDE 727
C GAC AP I++ + Y +L+ E EI+ ++ +
Sbjct: 123 SCFGACDIAPAIKIGEKVYGNLTSEKLSEIVDSYREGQ 160
>UniRef50_Q6FE68 Cluster: NADH dehydrogenase I chain E; n=5;
Moraxellaceae|Rep: NADH dehydrogenase I chain E -
Acinetobacter sp. (strain ADP1)
Length = 170
Score = 84.6 bits (200), Expect = 5e-15
Identities = 38/139 (27%), Positives = 79/139 (56%)
Frame = +2
Query: 296 YPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIG 475
YP + R A + L QR++G W+ + M+ +A++L++ + VATFY R+P+G
Sbjct: 33 YP--YPRAASLDALKCVQRRNG-WVDDAQMNAIAQMLSISVADLEGVATFYNRIYRQPVG 89
Query: 476 KYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQV 655
++ + +C + C+L G++ + A ++E + G + G+F++ + CLG C P + +
Sbjct: 90 RHVILLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRFTLLPICCLGNCDKGPTLMI 149
Query: 656 NDDYYEDLSVEDTKEIISK 712
++D + + V K+++ K
Sbjct: 150 DEDTHGLVDVSSVKQLLEK 168
>UniRef50_Q2S5I9 Cluster: NADH-ubiquinone oxidoreductase 24 kDa
subunit, putative; n=2; Sphingobacteriales genera
incertae sedis|Rep: NADH-ubiquinone oxidoreductase 24
kDa subunit, putative - Salinibacter ruber (strain DSM
13855)
Length = 249
Score = 84.6 bits (200), Expect = 5e-15
Identities = 49/179 (27%), Positives = 93/179 (51%), Gaps = 6/179 (3%)
Frame = +2
Query: 215 DTPEDNPSIPFE-----FSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPIS 379
+ P+ +P F ++ + ++EA YPE + A++ +L LAQ + G +L
Sbjct: 36 ELPDQDPDPAFSDDELVWTDEEEAQIEAWKDQYPED--QAAIMKVLWLAQEKFG-YLAPE 92
Query: 380 AMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQET 559
+ A+ L++ + Y VATFY + + G Y + VCT C + G +L+ ++++
Sbjct: 93 VIQLCADTLDMTFTQAYGVATFYHQYFKEEKGTYVLDVCTCFTCQVCGGYDVLHYLEEKL 152
Query: 560 NCEVGGNSPCGKFSVSEVECLGACVNAPMIQV-NDDYYEDLSVEDTKEIISKLKKDEKP 733
G + G F++ E ECLG+C +APM+++ N Y +L+ + +++ L+ E P
Sbjct: 153 GVHAGETTDDGMFTIQEAECLGSCGSAPMMEITNGVYVHNLTPDKIDDLVESLRAGEVP 211
>UniRef50_Q4AHT8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Chlorobium phaeobacteroides BS1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Chlorobium
phaeobacteroides BS1
Length = 172
Score = 84.6 bits (200), Expect = 5e-15
Identities = 47/160 (29%), Positives = 84/160 (52%)
Frame = +2
Query: 248 EFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRV 427
E + N + L+ Y +G K+G +IP+L Q G++P A K+ E + L +
Sbjct: 14 ESPEVNLSLINPLIEKY-QG-KKGNLIPVLQGVQ-SIFGYVPREAFIKLNEEMGLQLSDM 70
Query: 428 YEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVS 607
Y VATFY F P+GK+ ++VC T C ++ + I A+++E + G + F++
Sbjct: 71 YGVATFYAQFRLNPVGKHIIKVCHGTACHVQSATKITEALEKELGVKDGHTTEDNLFTLE 130
Query: 608 EVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDE 727
V CLG C AP++ + D+ + L+ + +I +++ E
Sbjct: 131 SVACLGCCSLAPVMMIGDETFGSLNGKKAARVIKDIRRKE 170
>UniRef50_A0J5R7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Shewanella woodyi ATCC 51908|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Shewanella
woodyi ATCC 51908
Length = 179
Score = 84.6 bits (200), Expect = 5e-15
Identities = 43/154 (27%), Positives = 81/154 (52%)
Frame = +2
Query: 254 SQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYE 433
S Q+ ++ L++ P+ G I L L Q + G W+ +++H ++ +P +
Sbjct: 22 SSKEQQGIDELISHSPQ--LAGITIDALKLIQAERG-WVSDASLHALSLYTQIPVADLDS 78
Query: 434 VATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEV 613
VATFY + R+P+GK + C C L G + I +KQ+ N G + +F++ +
Sbjct: 79 VATFYNLIFRQPVGKVVLHPCDGISCDLMGGEHIRQCLKQQLNITAGETTTDNRFTLIPL 138
Query: 614 ECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKL 715
CLGAC AP++ N +E+++ ++ +++S L
Sbjct: 139 PCLGACDKAPVMIANKQLFENMTTDELPKLLSTL 172
>UniRef50_A6PPY8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Victivallis vadensis ATCC BAA-548|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Victivallis vadensis ATCC BAA-548
Length = 170
Score = 84.2 bits (199), Expect = 6e-15
Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
Frame = +2
Query: 248 EFSQANQKRVEALLAIYPE-GHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 424
E +QA K + A+ I + + +IP+L Q +L + VA + +P R
Sbjct: 6 ETTQAMVKHLAAVNKILEKYDYSESKLIPILQEVQAVYK-YLSKDMISYVATSIGVPPSR 64
Query: 425 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGK-FS 601
VY VATFY F +P GKY +++C T C ++ S ILNA+ ++ + + F+
Sbjct: 65 VYGVATFYAHFSMQPKGKYIIKLCDGTACHVKKSHGILNALYEKLKLSGDKRTSDDQLFT 124
Query: 602 VSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEK 730
+ V CLGAC AP++ VN++ Y + E EI+ ++ +EK
Sbjct: 125 IETVSCLGACGLAPVMVVNEEVYGQCTPEKAIEIVDRIIAEEK 167
>UniRef50_Q74GA4 Cluster: NADH dehydrogenase I, E subunit; n=6;
Geobacter|Rep: NADH dehydrogenase I, E subunit -
Geobacter sulfurreducens
Length = 173
Score = 83.0 bits (196), Expect = 1e-14
Identities = 41/132 (31%), Positives = 77/132 (58%)
Frame = +2
Query: 317 GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVC 496
G ++P+L Q + G ++P + VAE LN+ +++ V TFY F +P G++ ++VC
Sbjct: 36 GNLMPVLQGIQDEYG-YVPRPTIDLVAERLNVYPSQIFGVLTFYAQFHLKPRGRFIIRVC 94
Query: 497 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 676
T C ++G+ I++ ++ +P +++ +V CLGAC AP+ VNDD +
Sbjct: 95 VGTACHVQGAPRIVDTFFEKLGIGHAETTPDLRYTFEKVACLGACGMAPLAMVNDDTFGK 154
Query: 677 LSVEDTKEIISK 712
++V+ +EII++
Sbjct: 155 MTVQKVEEIIAE 166
>UniRef50_Q8YYU5 Cluster: NADH dehydrogenase I chain E; n=4;
Bacteria|Rep: NADH dehydrogenase I chain E - Anabaena
sp. (strain PCC 7120)
Length = 164
Score = 81.8 bits (193), Expect = 3e-14
Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Frame = +2
Query: 260 ANQKRVEAL-LAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEV 436
+ KR++ L AI +++ A+I +L AQ + G+L + +A L LP RVY V
Sbjct: 12 SGDKRLKMLDAAIKRHQYQQDALIEILHKAQ-ELFGYLENDLLLYIAHSLKLPPSRVYGV 70
Query: 437 ATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVE 616
ATFY +F P G + VCT T C+++GS AIL +++ T G + G+ S+
Sbjct: 71 ATFYHLFSLAPQGVHSCVVCTGTACYVKGSSAILADLEKATRIHAGETTADGQLSLLTAR 130
Query: 617 CLGACVNAPMI 649
CLGAC AP +
Sbjct: 131 CLGACGIAPAV 141
>UniRef50_A3DCI7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Clostridium|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Clostridium thermocellum
(strain ATCC 27405 / DSM 1237)
Length = 165
Score = 81.4 bits (192), Expect = 4e-14
Identities = 46/144 (31%), Positives = 77/144 (53%), Gaps = 3/144 (2%)
Frame = +2
Query: 305 GHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYH 484
G A+I +L Q + ++P +++ L + + R++ VATFY F P GKY
Sbjct: 22 GTSETAIIAILQSIQEEYH-YIPKEVFPYLSKKLKVSEARIFSVATFYENFSLEPKGKYI 80
Query: 485 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCG---KFSVSEVECLGACVNAPMIQV 655
++VC T C +R S I+ +++E + G P F+V V CLGAC AP+I V
Sbjct: 81 IKVCDGTACHVRKSIPIIERLRKELG--LSGTKPTTDDLMFTVETVSCLGACGLAPVITV 138
Query: 656 NDDYYEDLSVEDTKEIISKLKKDE 727
ND Y +++ + E+I +L++ +
Sbjct: 139 NDKVYAEMTPDKASELIKQLREGD 162
>UniRef50_A5UZ48 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=10; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Roseiflexus sp. RS-1
Length = 178
Score = 81.0 bits (191), Expect = 6e-14
Identities = 44/114 (38%), Positives = 64/114 (56%)
Frame = +2
Query: 308 HKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHV 487
++ A+I +L AQ + G+L + +A L+LP RVY VATFY F P G++
Sbjct: 35 YRPDALIEVLHRAQ-ELFGYLSTDLLLFIANSLHLPPSRVYGVATFYHFFSLAPKGEHSC 93
Query: 488 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMI 649
VC T C++RG+ AIL A +Q + G +P G+ S+ CLGAC AP +
Sbjct: 94 VVCLGTACYVRGAAAILAAAEQMLGIKAGHTTPDGRLSLETARCLGACGIAPTV 147
>UniRef50_A5FS13 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=3; Dehalococcoides|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Dehalococcoides sp. BAV1
Length = 154
Score = 81.0 bits (191), Expect = 6e-14
Identities = 45/151 (29%), Positives = 78/151 (51%)
Frame = +2
Query: 269 KRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFY 448
K +L++Y K+ +IP+L LA +++ +L M KVA + +P+ VY +ATFY
Sbjct: 7 KTYTPVLSLYEA--KKENLIPIL-LAFQRNFSYLSRDMMQKVAAYVGVPESSVYNIATFY 63
Query: 449 TMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGA 628
+ F P G + V VC T C + G++ +L I++ + G + + S+ + C G
Sbjct: 64 SQFRLEPPGIHRVHVCRGTACHVMGAERLLRNIEKRLGIKAGETTLDNEISLDTINCAGI 123
Query: 629 CVNAPMIQVNDDYYEDLSVEDTKEIISKLKK 721
C AP ++V+ Y L+ I+ K K+
Sbjct: 124 CGLAPTLEVDGKLYTRLNGSSLNRILGKKKR 154
>UniRef50_Q2C5T5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Vibrionaceae|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Photobacterium sp. SKA34
Length = 188
Score = 80.6 bits (190), Expect = 8e-14
Identities = 49/152 (32%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
Frame = +2
Query: 275 VEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTM 454
+E +A YPE KR I L Q + G ++ +++ V+E+ +L ++ E+ TFYT+
Sbjct: 10 LEEHIAHYPE--KRAGAIYCLYFMQDKYG-YITKPSLNLVSELTDLSTTQLDELITFYTL 66
Query: 455 FIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACV 634
RRP+G+ ++VC + C RG+ +L A + T +G + G +V CLG C
Sbjct: 67 LRRRPVGRNIMRVCDSISCHTRGAKKVLEAAENATGKALGEIANDGSITVLPSICLGLCD 126
Query: 635 NAPMIQVNDDYYE-DLSVEDTKEIISKLKKDE 727
AP +NDD E +L+ E + I+++L ++E
Sbjct: 127 RAPAALINDDRVEGELTPERMRMILTELAEEE 158
>UniRef50_A0LGJ1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB)
Length = 162
Score = 80.6 bits (190), Expect = 8e-14
Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Frame = +2
Query: 293 IYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPI 472
I P + ++I +L AQ G +LP +VAE L L +Y V TFY F P
Sbjct: 21 IEPYRGQPNSLIQVLAKAQEYIG-YLPKWVQVQVAEGLGLSLQEIYGVTTFYAFFSLIPR 79
Query: 473 GKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQ 652
G++ + VC T C+++G+ +L ++ + G +P +F++ V C+GAC AP +
Sbjct: 80 GRHKLSVCAGTACYVKGTKNVLKGVRDAIGIKPGQTTPDSRFTMEIVRCIGACGLAPAVI 139
Query: 653 VN-DDYYEDLSVEDTKEIIS 709
VN D + L E EI+S
Sbjct: 140 VNGKDVHGRLEAEQIPEILS 159
>UniRef50_Q835I9 Cluster: NAD-dependent formate dehydrogenase, gamma
subunit, putative; n=1; Enterococcus faecalis|Rep:
NAD-dependent formate dehydrogenase, gamma subunit,
putative - Enterococcus faecalis (Streptococcus
faecalis)
Length = 162
Score = 79.8 bits (188), Expect = 1e-13
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Frame = +2
Query: 332 LLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPC 511
L++L G++ VAE L+L + RVYE+ +FY + P KY +++C +TPC
Sbjct: 27 LIELQFASEEGYIDQETAQLVAEHLHLTEARVYEIVSFYAILKTEPQAKYVLKICNSTPC 86
Query: 512 WLRGSDAILNAIKQETNCEVGGNSPC--GKFSVSEVECLGACVNAPMIQVNDDYYEDLSV 685
G + + ET EV N P G F + C+GAC P+I++ D + L+
Sbjct: 87 HYTGGAMVAEVL--ETILEVPENQPTPDGLFMYHSIPCIGACDLGPVIKIKDTVFSQLTE 144
Query: 686 EDTKEIISKLKKD 724
E ++I L+ D
Sbjct: 145 EKIYQLIQHLQND 157
>UniRef50_Q4AMU5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Chlorobium phaeobacteroides BS1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Chlorobium
phaeobacteroides BS1
Length = 195
Score = 79.8 bits (188), Expect = 1e-13
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Frame = +2
Query: 305 GHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYH 484
G A +PLL Q + G +LP AM + ++ ++Y VATFY+ F P+G++
Sbjct: 23 GKSVSAAVPLLQAVQNEYG-YLPREAMDIIVAETDVGASQLYGVATFYSQFRLDPVGRHV 81
Query: 485 VQVCTTTPCWLRGSDAILNAIKQETNC--EVGGNSPCGKFSVSEVECLGACVNAPMIQVN 658
++VC T C + G+D I A++Q E + G ++V +V C+G C AP++ +
Sbjct: 82 IKVCHGTACHVSGADRINTALRQSLGIKNEDEDTASNGSYTVEDVACIGCCSLAPVMVIG 141
Query: 659 DDYYEDLSVEDTKEIISK 712
D+ + +L D + + K
Sbjct: 142 DETFGNLKGTDAQRSLKK 159
>UniRef50_Q0PQQ4 Cluster: NADH dehydrogenase I E subunit; n=1;
Endoriftia persephone 'Hot96_1+Hot96_2'|Rep: NADH
dehydrogenase I E subunit - Endoriftia persephone
'Hot96_1+Hot96_2'
Length = 123
Score = 79.8 bits (188), Expect = 1e-13
Identities = 37/112 (33%), Positives = 65/112 (58%)
Frame = +2
Query: 218 TPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVA 397
T E N + FS ++ ++ +A YP ++ A++ L + Q +GGWL + M VA
Sbjct: 3 TTEANNKVEL-FSSEVREEIDRWVAKYPAEWRQSAVMAALRIVQDANGGWLTTALMDDVA 61
Query: 398 EILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQ 553
L++ + VYEVATFY+M+ +P+GK+ + +CT C + SD I+ +++
Sbjct: 62 AYLDMAPIAVYEVATFYSMYELKPVGKHKICICTNVSCMINNSDRIVEHLEK 113
>UniRef50_Q01WJ0 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Solibacter usitatus
(strain Ellin6076)
Length = 170
Score = 79.8 bits (188), Expect = 1e-13
Identities = 45/140 (32%), Positives = 76/140 (54%)
Frame = +2
Query: 305 GHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYH 484
G + A+I L Q + G+L + + VA +L +P RVY ATFY F +P G++
Sbjct: 28 GREPHALIETLHTVQ-ECFGYLDEAGLRFVASVLRVPLSRVYGAATFYHFFTLKPKGRHT 86
Query: 485 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 664
VCT T C+++G+ A+L AI+++ + G + G+ SV CLG+C AP ++
Sbjct: 87 CVVCTGTACYIKGAPALLGAIEKQYGIKPGETTADGELSVLTARCLGSCGLAPAAVMDQA 146
Query: 665 YYEDLSVEDTKEIISKLKKD 724
L E++++++KD
Sbjct: 147 V---LGKIGPAEMLARIEKD 163
>UniRef50_Q1NQY7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - delta proteobacterium
MLMS-1
Length = 200
Score = 79.4 bits (187), Expect = 2e-13
Identities = 42/124 (33%), Positives = 66/124 (53%)
Frame = +2
Query: 290 AIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRP 469
A+ G++ G +I L Q QS G++ AM ++A L LP +VY V TFY F +P
Sbjct: 26 AMRRNGYQAGGLIEALHAVQ-QSYGYIDEEAMGRLATALTLPLSKVYGVVTFYHFFHLKP 84
Query: 470 IGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMI 649
G++ VC T C+++G+ IL I + + G + G S+ C+GAC AP +
Sbjct: 85 KGRHSCVVCLGTACYIKGAAEILGDIAAAYHIKAGETTADGALSLLTARCVGACGQAPAV 144
Query: 650 QVND 661
++D
Sbjct: 145 VLDD 148
>UniRef50_A3ETZ6 Cluster: NADH ubiquinone oxidoreductase; n=1;
Leptospirillum sp. Group II UBA|Rep: NADH ubiquinone
oxidoreductase - Leptospirillum sp. Group II UBA
Length = 627
Score = 79.0 bits (186), Expect = 2e-13
Identities = 37/134 (27%), Positives = 65/134 (48%)
Frame = +2
Query: 320 AMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCT 499
A++PLL + ++ + + +++++ L + + TFY F+ P GK V+VC
Sbjct: 29 AVLPLLHYYMEKKN-YISEADVSRISQLTGLSVSDILGIGTFYQHFVFHPTGKNSVRVCL 87
Query: 500 TTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDL 679
TTPC RG + + + +P G F++ +CLG C AP +NDD Y +
Sbjct: 88 TTPCLFRGGKKTFETLSKSLGIGLEETTPDGLFTLYPAQCLGQCSEAPSFSINDDVYVGI 147
Query: 680 SVEDTKEIISKLKK 721
E I+ + +K
Sbjct: 148 PPEKIPSILDEYRK 161
>UniRef50_Q2LS97 Cluster: NADH-quinone oxidoreductase chain F; n=2;
Syntrophus aciditrophicus SB|Rep: NADH-quinone
oxidoreductase chain F - Syntrophus aciditrophicus
(strain SB)
Length = 638
Score = 78.6 bits (185), Expect = 3e-13
Identities = 47/161 (29%), Positives = 73/161 (45%)
Frame = +2
Query: 323 MIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTT 502
M L DL L ++ VAE +NLP+ V FYTMF RP K+ ++VC +
Sbjct: 52 MAILRDLENLSGNQQLSPETLNAVAEAMNLPQSTVAGFVGFYTMFSTRPRAKFLIRVCKS 111
Query: 503 TPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLS 682
PC + G+ I + +++ G + G F + ECLG C AP + +N D + +L+
Sbjct: 112 GPCHVMGARTIFDYVEKHLGISPGQTTADGLFHLEACECLGICSVAPAMMINYDLHGNLT 171
Query: 683 VEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSLTEEP 805
E I+ + E P G + G + +EP
Sbjct: 172 EERIATILDGYRSRE-----PFFGEACGPEVEGRVCMLDEP 207
>UniRef50_A7IL17 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa
subunit; n=3; Alphaproteobacteria|Rep: NADH
dehydrogenase (Ubiquinone) 24 kDa subunit - Xanthobacter
sp. (strain Py2)
Length = 176
Score = 78.2 bits (184), Expect = 4e-13
Identities = 42/132 (31%), Positives = 68/132 (51%)
Frame = +2
Query: 308 HKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHV 487
H GA +P+L Q ++ G++P A+ +AE LNL + VY V TFY F R G++ V
Sbjct: 33 HLEGATMPILHALQ-ETFGFVPDPAVPMIAESLNLSRAEVYGVLTFYHDFRREAPGRHVV 91
Query: 488 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 667
++C C G A+ ++++ ++G SP G+ ++ + CLG C AP V+
Sbjct: 92 KLCAAEACQSVGGKALAQYVEEKLGVDMGSTSPDGRVTLEPIYCLGLCACAPSALVDGQL 151
Query: 668 YEDLSVEDTKEI 703
L + EI
Sbjct: 152 VGRLDRDAIDEI 163
>UniRef50_Q47WZ1 Cluster: Formate dehydrogenase, gamma subunit; n=1;
Colwellia psychrerythraea 34H|Rep: Formate
dehydrogenase, gamma subunit - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 163
Score = 77.0 bits (181), Expect = 1e-12
Identities = 44/153 (28%), Positives = 81/153 (52%), Gaps = 2/153 (1%)
Frame = +2
Query: 263 NQKRVEALLAIYPEGHKR--GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEV 436
N K ++ + I E H+ GAM+P+L Q ++P +A+ +A+ LN+ K V+ V
Sbjct: 5 NDKGLQQIATII-EQHQTLPGAMLPILHAIQNDLS-FIPSNALPLIAKALNVSKAEVHGV 62
Query: 437 ATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVE 616
+FY F G + +++C C GS A+ IKQ + + S ++++ V
Sbjct: 63 ISFYHHFRTEEPGAHVIEICRGESCQAMGSRALEENIKQNLSIDYHQTSKDRQYTLEPVY 122
Query: 617 CLGACVNAPMIQVNDDYYEDLSVEDTKEIISKL 715
CLG C +P +++ DD + +L ++ ++II+ L
Sbjct: 123 CLGNCACSPAMRIGDDIHGELDLQKFEQIIASL 155
>UniRef50_A0RMD2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kDa
subunit; n=1; Campylobacter fetus subsp. fetus
82-40|Rep: Hydrogenosomal NADH dehydrogenase 24 kDa
subunit - Campylobacter fetus subsp. fetus (strain
82-40)
Length = 163
Score = 77.0 bits (181), Expect = 1e-12
Identities = 41/137 (29%), Positives = 69/137 (50%)
Frame = +2
Query: 314 RGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 493
R ++P L + QR G ++ + + + L + M E FY+MF ++ GK+ ++
Sbjct: 24 RALVLPSLWMVQRAQG-FIDAKDVLYLEKTLGIRSMFYAEAIGFYSMFNQKSKGKFELKF 82
Query: 494 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 673
C T C LRGSD ++ + ++G S G FS+ E ECLG C AP + N + +
Sbjct: 83 CKTITCKLRGSDELIKFTQDILGIKMGETSSDGLFSLGETECLGYCEKAPCMLCNLEQID 142
Query: 674 DLSVEDTKEIISKLKKD 724
L +I K++K+
Sbjct: 143 SLDENSITNLIEKIRKE 159
>UniRef50_Q749M0 Cluster: NAD-reducing hydrogenase, putative; n=4;
Bacteria|Rep: NAD-reducing hydrogenase, putative -
Geobacter sulfurreducens
Length = 191
Score = 76.6 bits (180), Expect = 1e-12
Identities = 45/132 (34%), Positives = 73/132 (55%)
Frame = +2
Query: 269 KRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFY 448
K VE L Y ++ A++ +L +AQ ++ G L M VA L +P RVY VATFY
Sbjct: 23 KVVERTLKQYQ--YRADALLEVLHVAQ-ETFGCLSDELMTHVARQLRVPPSRVYGVATFY 79
Query: 449 TMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGA 628
F G++ VCT T C+++ S I+ ++ E + + G + GK ++S V CLG+
Sbjct: 80 HFFTLEARGEHSCVVCTGTACYVKRSAEIVTRLENEFDVKAGKTTADGKLTLSTVRCLGS 139
Query: 629 CVNAPMIQVNDD 664
C AP++ ++ +
Sbjct: 140 CGLAPIVVLDGE 151
>UniRef50_Q2FP98 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Methanospirillum hungatei JF-1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 160
Score = 76.6 bits (180), Expect = 1e-12
Identities = 44/155 (28%), Positives = 84/155 (54%), Gaps = 7/155 (4%)
Frame = +2
Query: 263 NQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVAT 442
++KR++ ++ YP + G + +L Q Q +P+ + V+E L+LP ++ + T
Sbjct: 2 DEKRLDEIIEKYP--YPAGRTLGVLREIQIQERH-IPMDTLKLVSEKLDLPLSELFALVT 58
Query: 443 FYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNC--EVGG-----NSPCGKFS 601
FY+ F +P+G++ + VC TPC ++G++ IL +++ EV +P KF+
Sbjct: 59 FYSFFSLKPVGEHLITVCMGTPCHVKGAEKILETLEEHLGLSGEVQDGKYLQTTPDNKFT 118
Query: 602 VSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEII 706
V C GAC AP++ V+ + + ++ E EI+
Sbjct: 119 VEIARCFGACSMAPVLHVDGELHGYVTPERIPEIL 153
>UniRef50_Q6N1Z1 Cluster: NADH-ubiquinone dehydrogenase chain E;
n=8; Alphaproteobacteria|Rep: NADH-ubiquinone
dehydrogenase chain E - Rhodopseudomonas palustris
Length = 162
Score = 76.2 bits (179), Expect = 2e-12
Identities = 35/120 (29%), Positives = 64/120 (53%)
Frame = +2
Query: 305 GHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYH 484
G + AM+ L L Q ++ GW+ + + + A++L + + +ATFY+ R P+G
Sbjct: 19 GGAKAAMVEALKLVQ-EAEGWVSDAHLKEAADVLGVTPAEIDALATFYSQIFRSPVGDTV 77
Query: 485 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 664
+ +C C+L G DA+ +A+ + G +P GKF++ + C+G C AP+ V +
Sbjct: 78 ILLCDGLSCYLCGGDAVRDAVMSKLGIGFGETTPDGKFTLINICCVGGCDRAPVALVGPE 137
>UniRef50_A1FMP2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Pseudomonas|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Pseudomonas putida W619
Length = 160
Score = 74.9 bits (176), Expect = 4e-12
Identities = 39/136 (28%), Positives = 74/136 (54%)
Frame = +2
Query: 317 GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVC 496
GA++P+L Q +S G++P +A+ +A LNL V V +FY F P ++ +++C
Sbjct: 23 GALLPILHAVQ-ESIGFIPDAAVADIAHALNLSLAEVRGVISFYHDFRTAPPARHTLRLC 81
Query: 497 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 676
C RGS+A+ ++++ + G S G S+ V CLGAC +P ++++ +
Sbjct: 82 RAESCQSRGSEALAAQLREQLALDDHGTSADGAISLRPVYCLGACACSPALELDGQVHAR 141
Query: 677 LSVEDTKEIISKLKKD 724
L+ E + +++ +D
Sbjct: 142 LTPERLRSLVNGCLED 157
>UniRef50_A6PMG8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit precursor; n=1; Victivallis vadensis ATCC
BAA-548|Rep: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit precursor - Victivallis vadensis ATCC BAA-548
Length = 150
Score = 72.9 bits (171), Expect = 2e-11
Identities = 35/117 (29%), Positives = 59/117 (50%)
Frame = +2
Query: 362 GWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILN 541
G++ ++ ++E +P++ V V +FY F R GKY + +C T C ++GS +
Sbjct: 30 GYVSDESIRAISEYFGIPEVEVEGVLSFYAQFKRVKPGKYKIAICDGTACHIKGSPLVQE 89
Query: 542 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISK 712
+ + E G G FS+ V CLG C AP++ VN Y L + T +I+ +
Sbjct: 90 WVSRALGIEDGQTDERGHFSLETVACLGCCSLAPVMSVNGRVYGKLDRKSTIKILKE 146
>UniRef50_Q608U6 Cluster: Formate dehydrogenase, gamma subunit; n=3;
Proteobacteria|Rep: Formate dehydrogenase, gamma subunit
- Methylococcus capsulatus
Length = 159
Score = 72.5 bits (170), Expect = 2e-11
Identities = 38/135 (28%), Positives = 70/135 (51%)
Frame = +2
Query: 317 GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVC 496
GA++P+L Q + G ++P A+ ++A+ LNL + V+ V +FY F GK+ + +C
Sbjct: 23 GALLPILHGIQDRIG-FIPEDAVPQIAKALNLSRAEVHGVISFYHYFRTTAPGKHTIHLC 81
Query: 497 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 676
C S+++ +K + + G FS+ V CLG C +P + ++ + Y
Sbjct: 82 RAESCQAMNSESLETHVKARLGIDYHETTADGAFSLEPVYCLGNCACSPSMMIDHEVYGH 141
Query: 677 LSVEDTKEIISKLKK 721
+S + II +LK+
Sbjct: 142 VSPQSFDAIIDELKE 156
>UniRef50_Q5BT40 Cluster: SJCHGC02806 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02806 protein - Schistosoma
japonicum (Blood fluke)
Length = 82
Score = 71.3 bits (167), Expect = 5e-11
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = +2
Query: 521 GSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 670
GS+AILN +K+ E G +P F+++EVECLGACVNAPM+Q+NDDYY
Sbjct: 6 GSEAILNTLKKTLGIEPGQTTPDKMFTLTEVECLGACVNAPMLQINDDYY 55
>UniRef50_A3Z0U6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Synechococcus sp. WH 5701|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Synechococcus sp. WH 5701
Length = 168
Score = 70.1 bits (164), Expect = 1e-10
Identities = 38/113 (33%), Positives = 64/113 (56%)
Frame = +2
Query: 320 AMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCT 499
A+I +L AQ+ +L + VA L LP RV A+FY +F +P ++ VCT
Sbjct: 36 ALIEVLHGAQKLYS-YLSDDLLRHVATRLQLPLSRVKGTASFYHLFRFQPPARHRCVVCT 94
Query: 500 TTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVN 658
T C ++G+ A++ A+++ ++G G S+SEV CLG C +AP++ ++
Sbjct: 95 GTACQIQGAPALIAAMEEGLGLKLGARRGDGWASLSEVRCLGTCSDAPLVLID 147
>UniRef50_A3YBB2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Marinomonas sp. MED121|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Marinomonas
sp. MED121
Length = 189
Score = 70.1 bits (164), Expect = 1e-10
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 2/155 (1%)
Frame = +2
Query: 260 ANQKRVEALLAIYPEGHKR--GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYE 433
ANQ +E+++ K G ++P+L Q Q G ++P S++ + + LN+ + V+
Sbjct: 22 ANQAEIESVVGRILVELKDIPGPLLPILHEVQHQLG-YVPDSSLPIIGKALNISRAEVHG 80
Query: 434 VATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEV 613
V TFY F +P G++ ++VC C G + K + + + ++ V
Sbjct: 81 VVTFYHHFSSKPRGRHIIEVCRAESCQSMGGRDLEAHAKSALGLDWYQTTMDKEITLEPV 140
Query: 614 ECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLK 718
CLG C +P I+V D+ Y + E EI+ +L+
Sbjct: 141 FCLGNCACSPAIRVGDEVYGRMDAEQFDEIVDELR 175
>UniRef50_UPI0000E87F9D Cluster: ATP synthase subunit E; n=1;
Methylophilales bacterium HTCC2181|Rep: ATP synthase
subunit E - Methylophilales bacterium HTCC2181
Length = 157
Score = 69.7 bits (163), Expect = 1e-10
Identities = 41/137 (29%), Positives = 65/137 (47%)
Frame = +2
Query: 311 KRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQ 490
K GA++PL+ Q S G++P + ++ NL ++ TFY F P GK +Q
Sbjct: 21 KPGALLPLMHAIQ-DSLGYIPEDSYPIISSAYNLSIAEIHGFVTFYHHFRTSPSGKNILQ 79
Query: 491 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 670
VC C GS++I N K+ + S G ++ V CLG C +P + +ND
Sbjct: 80 VCRAESCQSMGSESIENYCKKVLGVDYHETSKDGVITLEPVYCLGNCACSPSVMMNDKVI 139
Query: 671 EDLSVEDTKEIISKLKK 721
++ E II +K+
Sbjct: 140 GRVTPEKIDNIIKAVKQ 156
>UniRef50_O13691 Cluster: Probable NADH-ubiquinone oxidoreductase 24
kDa subunit, mitochondrial precursor; n=1;
Schizosaccharomyces pombe|Rep: Probable NADH-ubiquinone
oxidoreductase 24 kDa subunit, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 162
Score = 69.7 bits (163), Expect = 1e-10
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 3/158 (1%)
Frame = +2
Query: 251 FSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVY 430
F N + +A+LA YP + A++PLLDLAQRQ G W+P +AM+++A + + V+
Sbjct: 7 FKPENLQLAKAILARYPLRFQSAALVPLLDLAQRQHGTWIPPTAMYEIASLAGVSIDYVH 66
Query: 431 EVATFY-TMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGK--FS 601
+ Y F RP K V++C + C + + +N + S K F
Sbjct: 67 SLILAYPNDFFWRP-KKPRVRICNSWMCQQAAEE------QGNSNWDSQCRSVATKYGFD 119
Query: 602 VSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKL 715
V CLG C P + +ND Y + E +I+ L
Sbjct: 120 VENTGCLGNCFQGPAMWINDKIYGVNTKEKLVDIMEAL 157
>UniRef50_Q98BW7 Cluster: NAD-dependent formate dehydrogenase gamma
subunit; n=15; Proteobacteria|Rep: NAD-dependent formate
dehydrogenase gamma subunit - Rhizobium loti
(Mesorhizobium loti)
Length = 159
Score = 69.3 bits (162), Expect = 2e-10
Identities = 39/134 (29%), Positives = 69/134 (51%)
Frame = +2
Query: 317 GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVC 496
G ++P+L Q + G +P +A+ +A+ LNL + V+ V TFY F RP G++ +++C
Sbjct: 26 GPLLPILHEIQDEFGH-VPQAALPVIADGLNLSRAEVHGVVTFYHDFRARPAGRHVLKLC 84
Query: 497 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 676
C GSDA+ IKQ + G ++ V CLG C +P ++ +
Sbjct: 85 QAEACQSMGSDAVAAKIKQLLGIGFHETTRDGSVTLEPVYCLGLCACSPSAMLDGEVIGR 144
Query: 677 LSVEDTKEIISKLK 718
L + EI+++++
Sbjct: 145 LDDDKIDEILAEVR 158
>UniRef50_A3JB74 Cluster: ATP synthase subunit E; n=1; Marinobacter
sp. ELB17|Rep: ATP synthase subunit E - Marinobacter sp.
ELB17
Length = 178
Score = 69.3 bits (162), Expect = 2e-10
Identities = 37/136 (27%), Positives = 69/136 (50%)
Frame = +2
Query: 308 HKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHV 487
HK GA++P+L Q + G ++P A+ +AE+L + ++ V +FY F P G +
Sbjct: 36 HKPGALLPILHAIQDRVG-YVPEDAVPIIAEMLQQTRADIHGVISFYHHFRTHPSGSNLL 94
Query: 488 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 667
+VC C RG A+ +++ + + +F++ V CLG C P I+VN+D
Sbjct: 95 EVCRAEACQARGGRALERHVQERLSVGYHDTTADNEFTLVPVYCLGNCACGPSIRVNNDI 154
Query: 668 YEDLSVEDTKEIISKL 715
++ + +++ L
Sbjct: 155 IGRVTPQKFDQLVDAL 170
>UniRef50_A1AP34 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit precursor; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit precursor - Pelobacter
propionicus (strain DSM 2379)
Length = 169
Score = 68.9 bits (161), Expect = 3e-10
Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Frame = +2
Query: 320 AMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCT 499
A + L+ A + +LP+ + V E L++P +V+ V +FY F P GKY +++C
Sbjct: 30 ARLTLILQAIQDEYRYLPMEVLSHVIEELDIPATKVFGVVSFYAHFTLEPRGKYVIRLCD 89
Query: 500 TTPCWLRGSDAILNAIKQETNCEVGG-NSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 676
T C + S IL A+ + +P F+V V CLGAC AP++ +N++ Y
Sbjct: 90 GTACHAKRSIPILEALYAKLGLSSKKVTTPDMLFTVETVTCLGACGLAPVMLINEEVYGR 149
Query: 677 LSVEDTKEIISKL 715
++ +I ++
Sbjct: 150 VTPASAVALIDEI 162
>UniRef50_Q483I3 Cluster: Formate dehydrogenase, gamma subunit; n=1;
Colwellia psychrerythraea 34H|Rep: Formate
dehydrogenase, gamma subunit - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 168
Score = 68.5 bits (160), Expect = 3e-10
Identities = 39/133 (29%), Positives = 67/133 (50%)
Frame = +2
Query: 317 GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVC 496
GA++P+L Q ++P A+ VA+ L + +Y V TFY F G++ +++C
Sbjct: 26 GALLPILHDIQHHFD-YIPKKAIAIVAQGLQQTEAEIYGVITFYAHFQLNKPGRHIIEIC 84
Query: 497 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 676
C GS A+ AIK + + G + F++ V CLG C +P I+V D+ Y
Sbjct: 85 RGEACQAMGSKALEKAIKSQLAVDFGQTTVDKNFTLEPVYCLGNCACSPSIKVADNVYGR 144
Query: 677 LSVEDTKEIISKL 715
++ E ++ +L
Sbjct: 145 MNSEKFAKLSEQL 157
>UniRef50_A5V6C3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Sphingomonadaceae|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Sphingomonas wittichii
RW1
Length = 159
Score = 67.7 bits (158), Expect = 6e-10
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Frame = +2
Query: 275 VEALLA--IYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFY 448
VEA++A + +G +RGA++PLL Q + G ++ + VA +NL + V+ V +FY
Sbjct: 9 VEAMVARLLAAQGERRGALLPLLHDLQEELG-FVGEETVAAVAAAMNLSRAEVHGVVSFY 67
Query: 449 TMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGA 628
F + P G++ V+ C C RG AI A+ +G G+ ++ V CLG
Sbjct: 68 HDFRKAPAGRHVVKYCRAESCRSRGGVAIEAALADRLRVTMGETRADGQVTLEPVYCLGL 127
Query: 629 CVNAP 643
C P
Sbjct: 128 CAIGP 132
>UniRef50_A0QNT7 Cluster: Formate dehydrogenase, gamma subunit; n=1;
Mycobacterium smegmatis str. MC2 155|Rep: Formate
dehydrogenase, gamma subunit - Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155)
Length = 161
Score = 67.7 bits (158), Expect = 6e-10
Identities = 37/119 (31%), Positives = 59/119 (49%)
Frame = +2
Query: 314 RGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 493
RG ++P+L Q + G +P A+ +AE LNL + V+ V TFY F P G+ V+V
Sbjct: 26 RGPLLPILHAVQERLG-CVPAEAVPVLAEELNLSRADVHGVITFYHDFRSEPAGRTTVRV 84
Query: 494 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 670
C C G+ ++ ++ ++G + G + +V CLG C P QV+ Y
Sbjct: 85 CRAEACQALGASRLVAHLQDRHGVQLGDATDDGTLTAEQVFCLGNCALGPSAQVDGRLY 143
>UniRef50_Q057X2 Cluster: NADH dehydrogenase I chain E; n=1;
Buchnera aphidicola str. Cc (Cinara cedri)|Rep: NADH
dehydrogenase I chain E - Buchnera aphidicola subsp.
Cinara cedri
Length = 156
Score = 66.9 bits (156), Expect = 1e-09
Identities = 35/137 (25%), Positives = 67/137 (48%)
Frame = +2
Query: 308 HKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHV 487
+ + A I L + Q W+ ++ +++IL++P V +ATFY R+P+G+ +
Sbjct: 21 NSQAACIEALKIVQEHRK-WICKDSIIAISKILSIPACEVESIATFYCHIFRKPVGRNII 79
Query: 488 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 667
+ C + C++ +I +K N G + ++++ CLGAC P++ VN
Sbjct: 80 RYCDSVVCFINNFKSIKKKLKYILNISPGETTSDCRYTLLPTCCLGACDKGPVMLVNKTL 139
Query: 668 YEDLSVEDTKEIISKLK 718
Y L+ + I+ K K
Sbjct: 140 YTRLTSKMLINILDKYK 156
>UniRef50_Q8NK93 Cluster: NADH-ubiquinone oxidoreductase 24kDa
subunit; n=1; Phanerochaete chrysosporium|Rep:
NADH-ubiquinone oxidoreductase 24kDa subunit -
Phanerochaete chrysosporium (White-rot fungus)
(Sporotrichumpruinosum)
Length = 56
Score = 65.7 bits (153), Expect = 2e-09
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +2
Query: 674 DLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSLTEEPTGPG 817
DL+ E TK+++ KK EKPKPGP+SGR SE GLT+LT EP GPG
Sbjct: 1 DLTPETTKKVLDAFKKGEKPKPGPQSGRHTSENSAGLTALTSEPYGPG 48
>UniRef50_Q89QJ0 Cluster: NADH dehydrogenase I chain E; n=16;
Alphaproteobacteria|Rep: NADH dehydrogenase I chain E -
Bradyrhizobium japonicum
Length = 162
Score = 64.5 bits (150), Expect = 6e-09
Identities = 33/117 (28%), Positives = 58/117 (49%)
Frame = +2
Query: 293 IYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPI 472
I + GA + +L Q + G++P +A+ VA+ LNL + V+ V TFY F +P
Sbjct: 21 IAEHARQEGATLVILHALQA-AFGYVPEAAIPMVAQALNLSRAEVHGVFTFYHDFRHKPA 79
Query: 473 GKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAP 643
G++ +++C C G DA+ + +G + + ++ + CLG C AP
Sbjct: 80 GRHVLKLCRAEACQAAGGDALAARAEARLGVSLGNTTADDRVTLEPIYCLGLCATAP 136
>UniRef50_A6VXL9 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa
subunit; n=3; Gammaproteobacteria|Rep: NADH
dehydrogenase (Ubiquinone) 24 kDa subunit - Marinomonas
sp. MWYL1
Length = 165
Score = 63.7 bits (148), Expect = 1e-08
Identities = 37/138 (26%), Positives = 66/138 (47%)
Frame = +2
Query: 311 KRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQ 490
K GA++PLL Q + ++P A+ +A L L + V+ V +FY F + G++ V+
Sbjct: 24 KPGALLPLLHAIQDRFS-YIPEDAVALIAGALKLSRAEVHGVISFYHHFRTKQPGRHVVE 82
Query: 491 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 670
VC C G+ + K + + + ++ V CLG C P ++V D+ Y
Sbjct: 83 VCRAEACQAVGARHLEAYAKSILDVQYHQTTADNNITLEPVYCLGNCSCGPSVRVGDEIY 142
Query: 671 EDLSVEDTKEIISKLKKD 724
++ + E+I LK +
Sbjct: 143 AEVDTQRFDELIESLKTE 160
>UniRef50_Q28P85 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa
subunit; n=1; Jannaschia sp. CCS1|Rep: NADH
dehydrogenase (Ubiquinone) 24 kDa subunit - Jannaschia
sp. (strain CCS1)
Length = 167
Score = 60.9 bits (141), Expect = 7e-08
Identities = 31/114 (27%), Positives = 58/114 (50%)
Frame = +2
Query: 317 GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVC 496
G ++P+L Q + G++P A +A LN+ + ++ V +FY F R+P GK +++C
Sbjct: 29 GPLLPILHDVQA-AFGYVPDDARALIATALNITEAELHGVISFYHDFRRKPAGKRVLKIC 87
Query: 497 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVN 658
C G++A+ +A+ + G + G +V + CLG C P ++
Sbjct: 88 RAEACQAMGANAMSDAVLAQLGLGWGETAADGGLTVEPIYCLGLCACGPAAMID 141
>UniRef50_A4XP94 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Pseudomonas mendocina ymp|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Pseudomonas
mendocina ymp
Length = 164
Score = 60.9 bits (141), Expect = 7e-08
Identities = 34/132 (25%), Positives = 63/132 (47%)
Frame = +2
Query: 317 GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVC 496
GA++P+L Q + G +P + +AE L L + V+ V +FY F P G+ +++C
Sbjct: 29 GALLPILHDIQDRLGA-VPPELLPLIAEDLCLSRAEVHGVVSFYHDFRATPPGRQVLKLC 87
Query: 497 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 676
C G A+ ++ + +G G S V CLG C AP + +N + +
Sbjct: 88 QAEACQSMGVKALTAELESKLGLPLGETREDGSLSFEPVYCLGNCACAPSVMLNGELHGR 147
Query: 677 LSVEDTKEIISK 712
+ E+ ++++
Sbjct: 148 VDAEEVLALLAE 159
>UniRef50_Q63RZ3 Cluster: NAD-dependent formate dehydrogenase gamma
subunit; n=28; Burkholderia|Rep: NAD-dependent formate
dehydrogenase gamma subunit - Burkholderia pseudomallei
(Pseudomonas pseudomallei)
Length = 171
Score = 60.5 bits (140), Expect = 9e-08
Identities = 28/113 (24%), Positives = 55/113 (48%)
Frame = +2
Query: 344 AQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRG 523
A + G++P + + +A+ LNL + V+ V T+Y F P +++C C G
Sbjct: 42 AIQDDAGYVPPACVEPLAKALNLSRAEVHGVLTYYHHFRTAPPAHVTIRLCRAEACRSMG 101
Query: 524 SDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLS 682
+A++ + C + G + ++ V CLG C +P + +ND+ + +S
Sbjct: 102 GEALVAHAQARAGCRIDGGHG-DRVALESVYCLGLCAQSPSLTINDEPHAKMS 153
>UniRef50_A0NMW4 Cluster: NADH:ubiquinone oxidoreductase,
NADH-binding (51 kD) subunit; n=2; Proteobacteria|Rep:
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD)
subunit - Stappia aggregata IAM 12614
Length = 626
Score = 59.7 bits (138), Expect = 2e-07
Identities = 40/156 (25%), Positives = 68/156 (43%)
Frame = +2
Query: 269 KRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFY 448
+ ++A+ A + G+ + M+ +L Q + P + H +A L ++ V VA+FY
Sbjct: 24 EEIDAICAQF--GNDKHRMLDILREVQDRYRCIAPATMDH-IAAATGLTRIEVEGVASFY 80
Query: 449 TMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGA 628
+ P G+ +++C G + A + E +VG S G FS+ C+G
Sbjct: 81 SFLSLTPKGRVTIRLCDDIVDRFSGLSEVACAFEDELGLKVGETSNDGAFSLEYTPCIGM 140
Query: 629 CVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPK 736
C AP VND L+ E + LK P+
Sbjct: 141 CDQAPAAMVNDIVLTKLTPETARSAAQALKAGRSPE 176
>UniRef50_Q47HE6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit:Respiratory-chain NADH dehydrogenase domain, 51
kDa subunit; n=1; Dechloromonas aromatica RCB|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa
subunit:Respiratory-chain NADH dehydrogenase domain, 51
kDa subunit - Dechloromonas aromatica (strain RCB)
Length = 632
Score = 56.4 bits (130), Expect = 1e-06
Identities = 32/118 (27%), Positives = 53/118 (44%)
Frame = +2
Query: 365 WLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNA 544
W+ A+ ++ L +P+ ++ VA FY F P GKY V + GS A+++
Sbjct: 42 WISPEAIDRMQVTLGVPRTKIEGVAGFYAFFYTEPRGKYRVLFSDNITDRMLGSKAMMDR 101
Query: 545 IKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLK 718
+ E G S G SV++ C G C P + +N+ L+ E EI ++
Sbjct: 102 LCNSLWVERGKVSEDGLVSVAQTACTGMCDQGPALLINNYAIAGLTAERIDEIAELIR 159
>UniRef50_Q0AL75 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Maricaulis maris MCS10|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Maricaulis
maris (strain MCS10)
Length = 163
Score = 55.2 bits (127), Expect = 3e-06
Identities = 35/132 (26%), Positives = 64/132 (48%)
Frame = +2
Query: 320 AMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCT 499
A+I +L Q S G + +A+ +A+ LNL + V V +FY F R+P ++ ++C
Sbjct: 26 ALIEVLHWLQA-SAGHISDAAIATIADALNLSRAEVLGVVSFYHDFRRQPGARHTFKLCR 84
Query: 500 TTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDL 679
C G++A+ AI+ + + P +F + V CLG C P +++ L
Sbjct: 85 AEACQAAGAEAVAAAIEDQLEALSTTDHP-PEFELKSVYCLGNCALGPAAMLDERPLGRL 143
Query: 680 SVEDTKEIISKL 715
+ E +++L
Sbjct: 144 TAERALAALTRL 155
>UniRef50_Q9ZBV8 Cluster: Putative respiratory chain oxidoreductase;
n=2; Streptomyces|Rep: Putative respiratory chain
oxidoreductase - Streptomyces coelicolor
Length = 646
Score = 54.4 bits (125), Expect = 6e-06
Identities = 48/172 (27%), Positives = 68/172 (39%), Gaps = 1/172 (0%)
Frame = +2
Query: 311 KRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQ 490
+R ++P L A GW+ A+ V L +P Y VATFY MF RP +
Sbjct: 34 RRDQLLPALH-ALNDRVGWISEGALDYVCRRLTVPPAEAYGVATFYAMFSVRPRPATVLH 92
Query: 491 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAP-MIQVNDDY 667
VCT C G+ + A++ E G + CLG C AP + +
Sbjct: 93 VCTDLACTAAGASRLCAAVESRLGPESG-------VKLERSPCLGLCERAPATLVIRAGE 145
Query: 668 YEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSLTEEPTGPGFG 823
+ EDT +DE + SG A GG + +E +G G G
Sbjct: 146 SARPAQEDTP--ARPAFEDEAVQAEGGSGGAAPGDGGGTSRSSEAESGGGKG 195
>UniRef50_Q1VMJ2 Cluster: Formate dehydrogenase, beta subunit; n=1;
Psychroflexus torquis ATCC 700755|Rep: Formate
dehydrogenase, beta subunit - Psychroflexus torquis ATCC
700755
Length = 243
Score = 52.8 bits (121), Expect = 2e-05
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 5/134 (3%)
Frame = +2
Query: 260 ANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVA 439
ANQ + + I PE +R +I L L Q + L + +A ++NLP ++EVA
Sbjct: 24 ANQAAINNVKTILPEILQRDMLIEYLHLIQDKVSH-LSSDNLSALAFLMNLPLSEIWEVA 82
Query: 440 TFYTMFI-----RRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSV 604
+FY F + P +++CT+ C L S+ IL I N ++ +F
Sbjct: 83 SFYDHFTLVKDSQNPPPTRTIRICTSVTCSLFNSEKILETIAPNDNTKI-------RFIA 135
Query: 605 SEVECLGACVNAPM 646
S CLGAC AP+
Sbjct: 136 S--PCLGACDKAPV 147
>UniRef50_A0K164 Cluster: NADH dehydrogenase; n=2;
Actinomycetales|Rep: NADH dehydrogenase - Arthrobacter
sp. (strain FB24)
Length = 566
Score = 52.0 bits (119), Expect = 3e-05
Identities = 30/91 (32%), Positives = 40/91 (43%)
Frame = +2
Query: 392 VAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEV 571
VA L LP V A+F+ F P G HV+VC+ C+ A + ++
Sbjct: 53 VARTLGLPAAAVEGPASFFADF-SAPRGARHVRVCSAAACFAATGGAHVPEVEAALGVPS 111
Query: 572 GGNSPCGKFSVSEVECLGACVNAPMIQVNDD 664
G SP G S+ V CLG C P V D+
Sbjct: 112 GSKSPDGTVSLQAVRCLGYCFAGPAALVGDE 142
>UniRef50_A0Z690 Cluster: Formate dehydrogenase subunit gamma; n=1;
marine gamma proteobacterium HTCC2080|Rep: Formate
dehydrogenase subunit gamma - marine gamma
proteobacterium HTCC2080
Length = 165
Score = 47.6 bits (108), Expect = 7e-04
Identities = 31/116 (26%), Positives = 51/116 (43%)
Frame = +2
Query: 362 GWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILN 541
G++P A+ VAE+ N+ + + V ++Y+ + P V++C C G A+
Sbjct: 42 GYVPEGAVAVVAEVCNVTRADAHGVFSYYSDLRKTPPPLISVRLCAAEACQAVGGRALAA 101
Query: 542 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIIS 709
A + C N + V CLG C P VND ++SVE K ++
Sbjct: 102 AWGEA--CAADPNLAGATGTDEPVFCLGNCALGPAALVNDQLIGNVSVEALKSAVA 155
>UniRef50_Q603S6 Cluster: NAD-reducing hydrogenase, alpha subunit;
n=9; Proteobacteria|Rep: NAD-reducing hydrogenase, alpha
subunit - Methylococcus capsulatus
Length = 610
Score = 46.4 bits (105), Expect = 0.002
Identities = 30/118 (25%), Positives = 52/118 (44%)
Frame = +2
Query: 380 AMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQET 559
A KVAE L + +V V FY+ P+GK+ +++ + + GS + + ++
Sbjct: 43 AQQKVAESLGVCITQVRAVVDFYSFLSTVPLGKFDIRISDSITDHMLGSREVAAGLCRKL 102
Query: 560 NCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKP 733
+ G G+ +S C G C P +N Y ED + I++L D+ P
Sbjct: 103 GIQPGEPRQDGRVGLSFTSCTGLCDQGPAGLIN-GYAIPRLTEDRTDQIARLINDDIP 159
>UniRef50_A1WBG0 Cluster: NADH dehydrogenase (Quinone) precursor;
n=6; Proteobacteria|Rep: NADH dehydrogenase (Quinone)
precursor - Acidovorax sp. (strain JS42)
Length = 640
Score = 45.2 bits (102), Expect = 0.004
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 8/187 (4%)
Frame = +2
Query: 275 VEALLAIYP-EGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYT 451
V LL P +G++R +I L G L + +A +NLP +VYEVA+FY
Sbjct: 45 VAQLLGPRPADGYRRDLLIEYLHRLNDHFGV-LHDRHLVALARQMNLPMAQVYEVASFYH 103
Query: 452 MF--IR---RPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVE 616
F +R + V+VC + C + G+ +L A+ + G G V V
Sbjct: 104 HFEIVRGHDAQAPRLVVRVCDSLSCTMAGARELLEAL--PARLQAAGQ---GDVQVVAVP 158
Query: 617 CLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLT--S 790
C+G C AP+ V+ +V+ E ++ LK + P++ + + GL S
Sbjct: 159 CVGRCEQAPVAVVHQCPVPHAAVDAVLETVN-LKPNRALALHPQAPAAINFDIAGLAEHS 217
Query: 791 LTEEPTG 811
+ +P G
Sbjct: 218 VPTQPDG 224
>UniRef50_Q5P4U3 Cluster: Formate dehydrogenase, NAD(P) reducing,
beta subunit; n=41; Proteobacteria|Rep: Formate
dehydrogenase, NAD(P) reducing, beta subunit - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 585
Score = 44.8 bits (101), Expect = 0.005
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 5/168 (2%)
Frame = +2
Query: 272 RVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYT 451
R+ A A+ E + +I L Q + G L + +AE + L + V+EVATFY
Sbjct: 40 RLAASAALAGETPRADRLIEYLHRLQDEHGA-LHADHLAALAEAMKLARAEVFEVATFYH 98
Query: 452 MFIRRPIG-----KYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVE 616
F P G V+VC + C + G + ++ + EV V V
Sbjct: 99 HFDFVPAGGKAPPALTVRVCESLGCAMAGGAELAASLASQLGAEV---------RVQRVP 149
Query: 617 CLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRF 760
C+G C +AP+ V + D + + + E+ +P P + RF
Sbjct: 150 CVGRCDSAPVAVVGQ---RPVLHADADRVAAVVAGGERDEPLPEAIRF 194
>UniRef50_Q2AG56 Cluster: NADH dehydrogenase I chain G; n=1;
Halothermothrix orenii H 168|Rep: NADH dehydrogenase I
chain G - Halothermothrix orenii H 168
Length = 80
Score = 43.2 bits (97), Expect = 0.015
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +2
Query: 476 KYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQV 655
K V+VC T C L GS AI++ +K + + K + V C+ +C P + V
Sbjct: 4 KITVEVCVGTSCHLMGSPAIIDYLKNLPD------NIKDKIEIKHVSCMNSCDRGPRVMV 57
Query: 656 NDDYYEDLSVEDTKEIISKL 715
ND + + E KE I+++
Sbjct: 58 NDTVIYNATPERVKEAITEI 77
>UniRef50_A6GJI0 Cluster: Putative NADH dehydrogenase I chain F;
n=1; Plesiocystis pacifica SIR-1|Rep: Putative NADH
dehydrogenase I chain F - Plesiocystis pacifica SIR-1
Length = 503
Score = 43.2 bits (97), Expect = 0.015
Identities = 35/114 (30%), Positives = 53/114 (46%)
Frame = +2
Query: 302 EGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKY 481
+G KR ++ LL+ + GG P KV+E +P+ VY VA+FYT+ + RP K
Sbjct: 4 KGAKRKVVLQLLE----EHGGMRP-GVARKVSEETGVPEADVYGVASFYTL-LSRPGAK- 56
Query: 482 HVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAP 643
+VC C + G++ ++ +K V V CLG C AP
Sbjct: 57 -TRVCQGLTCVMAGAEQVIAELKARGE------------EVEAVSCLGQCDRAP 97
>UniRef50_A1SU84 Cluster: Hydrogenase, NADP-reducing subunit C; n=1;
Psychromonas ingrahamii 37|Rep: Hydrogenase,
NADP-reducing subunit C - Psychromonas ingrahamii
(strain 37)
Length = 588
Score = 41.9 bits (94), Expect = 0.034
Identities = 29/157 (18%), Positives = 66/157 (42%)
Frame = +2
Query: 368 LPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAI 547
+P A+ ++A L++ ++ + FY P G Y + + + + G + I N +
Sbjct: 37 IPQQAIQQLATTLSISIPKIRALIEFYHFLHYHPRGDYDIYISDSIIDHMSGKNEISNYL 96
Query: 548 KQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDE 727
++ N ++ G+ +VS C G P +N L+ + +I++K++
Sbjct: 97 CEKLNVKLNQPRADGRVTVSNTSCTGMSDQGPAALINGLALTRLTRKKVDQIVTKIEGKI 156
Query: 728 KPKPGPRSGRFASEPLGGLTSLTEEPTGPGFGVQDAL 838
P++ ++ + L + PG ++ AL
Sbjct: 157 AIDRWPKAWFEVTDNIQSKGVLLNSESRPGEAIKKAL 193
>UniRef50_Q5UYB6 Cluster: Colbalt chelase thioredoxin; n=6;
Halobacteriaceae|Rep: Colbalt chelase thioredoxin -
Haloarcula marismortui (Halobacterium marismortui)
Length = 407
Score = 41.9 bits (94), Expect = 0.034
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +2
Query: 482 HVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND 661
HV VCT C G+ A+L ++Q + C ++ CLG C PM+ V
Sbjct: 318 HVAVCTNQTCAQDGAPAVLERLRQAAR----DSDQCDA-RITRSSCLGRCGEGPMVAVYP 372
Query: 662 D--YYEDLSVEDTKEIIS 709
D +Y + ED EI+S
Sbjct: 373 DGVWYGGVEDEDAAEIVS 390
>UniRef50_Q04NF7 Cluster: Ferredoxin related-protein; n=4;
Leptospira|Rep: Ferredoxin related-protein - Leptospira
borgpetersenii serovar Hardjo-bovis (strain JB197)
Length = 397
Score = 41.5 bits (93), Expect = 0.044
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +2
Query: 482 HVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND 661
HV +C +T C +GS ++++ I+ +C + + F VS+ CLG C P + V
Sbjct: 306 HVYICESTNCASKGSISLIHRIR---SC-IKKHGKQTDFRVSKSSCLGRCGEGPTLVVYP 361
Query: 662 D--YYEDLSVEDTKEIISK 712
D +Y+ ++ D +EI+++
Sbjct: 362 DGIWYQRVNENDAEEIVTE 380
>UniRef50_O96948 Cluster: Hydrogenase; n=14; Eukaryota|Rep:
Hydrogenase - Nyctotherus ovalis
Length = 1206
Score = 39.5 bits (88), Expect = 0.18
Identities = 28/131 (21%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Frame = +2
Query: 275 VEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTM 454
++ +LA YP+ ++ ++P++ + + G++ ++ K++E L + ++ + + Y
Sbjct: 639 LDEILAKYPK--EKEYLMPII-IEEHDKKGYISDPSIVKISEHLGMYPAQIESILSSYHY 695
Query: 455 FIRRPIGKYHVQVCTTTP-CWLRGSDAILNAIKQETNCEV--GGNSPCGKFSVSEVECLG 625
F R + +C C ++G +L I++ + GG + G F++ + LG
Sbjct: 696 FPREHTIAILMSICVHCHNCMMKGQGRLLKTIQETYDIHETHGGVAKDGSFTLHTLNWLG 755
Query: 626 ACVN-APMIQV 655
CVN AP + +
Sbjct: 756 YCVNDAPAMMI 766
>UniRef50_A5KR35 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 160
Score = 38.7 bits (86), Expect = 0.31
Identities = 18/82 (21%), Positives = 38/82 (46%)
Frame = +2
Query: 479 YHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVN 658
+ + CT C + IL +++E + G S G+F + CL C +P + ++
Sbjct: 78 HEIIACTGERCGKKDGMTILQNLRRELGIKKDGISSDGRFELRTRNCLKQCRTSPNMYID 137
Query: 659 DDYYEDLSVEDTKEIISKLKKD 724
Y ++D K +++ + K+
Sbjct: 138 RKLYSGEQLKDIKTLLNNICKE 159
>UniRef50_Q8KX55 Cluster: Ferredoxin PetF2; n=1; Synechococcus sp.
PCC 7002|Rep: Ferredoxin PetF2 - Synechococcus sp.
(strain PCC 7002) (Agmenellum quadruplicatum)
Length = 124
Score = 36.3 bits (80), Expect = 1.7
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Frame = +2
Query: 485 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 664
V +C C +GS AIL A + + +V V + C G C N P+++V D
Sbjct: 5 VLICCHHTCPKQGSTAILAAFQAQAPADV---------EVRQAGCFGECGNGPLVRVLPD 55
Query: 665 --YYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSL 793
+Y + D I+ + + +P G+F G + +L
Sbjct: 56 EVWYAHVQQADIPAIVKQHLRQNRPVKQKLYGKFHQPNHGAIAAL 100
>UniRef50_A6PNR9 Cluster: Putative uncharacterized protein
precursor; n=1; Victivallis vadensis ATCC BAA-548|Rep:
Putative uncharacterized protein precursor - Victivallis
vadensis ATCC BAA-548
Length = 540
Score = 36.3 bits (80), Expect = 1.7
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +2
Query: 503 TPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLS 682
+P +R A LNA TN G ++ F++ ++ A +N Q+NDDY S
Sbjct: 349 SPVLIRQLGAALNAGNPVTNAVPGDDAAYVGFTLEQIAARPAMLNEVAKQLNDDYVAAES 408
Query: 683 VEDTKEII-SKLKKDEKPKPGPRSGRFAS 766
++ +E ++L + + KP R+ FA+
Sbjct: 409 LKLAREAAKAELDRIKALKPAERAKAFAA 437
>UniRef50_Q2AG82 Cluster: Ferredoxin:4Fe-4S ferredoxin, iron-sulfur
binding:Iron hydrogenase, small subunit:Hydrogenase
large subunit, C-terminal; n=14; Bacteria|Rep:
Ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding:Iron
hydrogenase, small subunit:Hydrogenase large subunit,
C-terminal - Halothermothrix orenii H 168
Length = 666
Score = 35.9 bits (79), Expect = 2.2
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +2
Query: 485 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 664
VQVC T C+L GS +L + + E G S K + C C NAP ++V +
Sbjct: 591 VQVCVGTCCYLHGSYDLLQGLIERV--EEEGLS--DKVDIEATFCFENCKNAPSVKVGNQ 646
Query: 665 YYEDLSVEDTKEIISKLK 718
VE +I+ LK
Sbjct: 647 LLS--KVESVDDILKHLK 662
>UniRef50_A7HJV1 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit-like protein; n=1; Fervidobacterium nodosum
Rt17-B1|Rep: NADH:ubiquinone oxidoreductase 24 kD
subunit-like protein - Fervidobacterium nodosum Rt17-B1
Length = 96
Score = 35.9 bits (79), Expect = 2.2
Identities = 23/81 (28%), Positives = 40/81 (49%)
Frame = +2
Query: 476 KYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQV 655
K+ V +C + C L+GS +I +K+ NS K S+ CLG CVN I +
Sbjct: 11 KFVVSICFGSSCHLKGSYSIAERLKEFIEKNKLENSVELKGSL----CLGMCVNGVNILI 66
Query: 656 NDDYYEDLSVEDTKEIISKLK 718
+D +++ E+ + + L+
Sbjct: 67 DDKLLSNINCENIEVVYEYLR 87
>UniRef50_Q2Z141 Cluster: Putative ATP-dependent DNA helicase; n=1;
Pseudomonas phage EL|Rep: Putative ATP-dependent DNA
helicase - Pseudomonas phage EL
Length = 760
Score = 35.9 bits (79), Expect = 2.2
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +2
Query: 152 ISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQ---ANQKRVEALLAIYPE 304
+++RS+QT +++ D +F+ PED P PF Q + Q+R+E L + E
Sbjct: 223 VNTRSVQTLLAKEPDGVFIPLCEPEDGPEKPFVTDQLEGSRQQRLEHLRRLMDE 276
>UniRef50_A7PC77 Cluster: Chromosome chr2 scaffold_11, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_11, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 65
Score = 35.5 bits (78), Expect = 2.9
Identities = 21/56 (37%), Positives = 37/56 (66%)
Frame = +2
Query: 110 MLSSLRTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRV 277
ML+ L T + ++R ++ QT+ S +L H D+ ++NPSIP+EF+ AN+++V
Sbjct: 1 MLARLATEARQIFR---QNPQTSRSFS-TALNYHLDSLDNNPSIPWEFNDANKEKV 52
>UniRef50_A2Y635 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 368
Score = 35.5 bits (78), Expect = 2.9
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 542 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY--YEDLSVEDTKEIISKL 715
A+K EV G+ P G F + + + P I +ND Y +E ED +E+ +L
Sbjct: 229 AVKSSETSEVKGSLPEGFFDNKDADLRARGIQPPKIDINDAYKEFEKEIQEDLQEVDDRL 288
Query: 716 KKDE 727
+++E
Sbjct: 289 EEEE 292
>UniRef50_A0UUV1 Cluster: Putative uncharacterized protein; n=1;
Clostridium cellulolyticum H10|Rep: Putative
uncharacterized protein - Clostridium cellulolyticum H10
Length = 86
Score = 35.1 bits (77), Expect = 3.9
Identities = 17/76 (22%), Positives = 36/76 (47%)
Frame = +2
Query: 485 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 664
+ VC + C L+GS I+N ++ + N+ K + C+G C +++ D
Sbjct: 4 IYVCVGSSCHLKGSYQIINCFQR----MIKENNLESKAELKASFCMGHCTTGVCVKIGDT 59
Query: 665 YYEDLSVEDTKEIISK 712
+Y D+ V + + ++
Sbjct: 60 FYGDVGVINAESFFTE 75
>UniRef50_A5ALP4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 100
Score = 34.7 bits (76), Expect = 5.1
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 665 YYEDLSVEDTKEIISKLKKDEKPKPGPR 748
Y +SVE+ KE + K K DEKPKP P+
Sbjct: 45 YATXVSVEEVKEKVDKGKGDEKPKPDPK 72
>UniRef50_UPI00003C0AF2 Cluster: PREDICTED: similar to Bone
morphogenetic protein 10 precursor (BMP-10); n=1; Apis
mellifera|Rep: PREDICTED: similar to Bone morphogenetic
protein 10 precursor (BMP-10) - Apis mellifera
Length = 339
Score = 34.3 bits (75), Expect = 6.7
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 134 VQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKR 274
V GLW+ SSRS QT S+ P +PS+ FS KR
Sbjct: 17 VYGLWKTSSRSWQTPRVHAKASIQFDLSIPASSPSVLHRFSNRTSKR 63
>UniRef50_Q60C55 Cluster: Ferredoxin, 2Fe-2S; n=4;
Proteobacteria|Rep: Ferredoxin, 2Fe-2S - Methylococcus
capsulatus
Length = 108
Score = 34.3 bits (75), Expect = 6.7
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Frame = +2
Query: 482 HVQVCTTT--PCWLRGSDAILN--AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMI 649
HV VC T P RGS L A+ Q + G+F+++ CLG C P +
Sbjct: 7 HVFVCAQTRPPGHPRGSCGQLGSTAVFQTFMQQFEAGQLYGQFALTSTGCLGTCDLGPTV 66
Query: 650 QVNDD--YYEDLSVEDTKEIISKLKKDEKP 733
V + Y +S D EII + K+ +P
Sbjct: 67 LVYPEGVMYSKVSPADVSEIIEEHLKNGRP 96
>UniRef50_Q0LHA0 Cluster: Peptidase S9, prolyl oligopeptidase active
site region; n=1; Herpetosiphon aurantiacus ATCC
23779|Rep: Peptidase S9, prolyl oligopeptidase active
site region - Herpetosiphon aurantiacus ATCC 23779
Length = 682
Score = 34.3 bits (75), Expect = 6.7
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2
Query: 140 GLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKR 274
G++ +++R+ +T A R D +H TPEDNPSI +SQ+ KR
Sbjct: 320 GIYCLATRAARTRAYRYSDGA-MHELTPEDNPSIS-GYSQSLNKR 362
>UniRef50_A7S5S7 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 591
Score = 34.3 bits (75), Expect = 6.7
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +2
Query: 104 KKMLSSLRTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEA 283
+++L SL+ ++ L+ +S + + Q L +D P++ PS + ++A
Sbjct: 218 RRLLLSLKQSLEMLYEDTSEHSSSESRVQLGELLSLKDVPDEEPSRTMTLATRCAAMLDA 277
Query: 284 LLAIYPEGHKRGAMIPL---LDLAQRQSGGWLPI 376
L A+ G R A+IPL L L +R S P+
Sbjct: 278 LTAMTRTGISRFAVIPLEQTLQLVERVSSITEPV 311
>UniRef50_A6F4P8 Cluster: Putative uncharacterized protein; n=1;
Marinobacter algicola DG893|Rep: Putative
uncharacterized protein - Marinobacter algicola DG893
Length = 1036
Score = 33.9 bits (74), Expect = 8.9
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 155 SSRSIQTTASRQHDSLFVHRDTPEDNPSIP 244
S+ SI + ASR H +LFV+RD PE +P
Sbjct: 389 STESITSGASRDHKTLFVYRDAPEKLVRVP 418
>UniRef50_P15799 Cluster: Surface antigen CRP170; n=46; Giardia|Rep:
Surface antigen CRP170 - Giardia lamblia (Giardia
intestinalis)
Length = 328
Score = 33.9 bits (74), Expect = 8.9
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +2
Query: 557 TNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKP 733
T C+ G +P K + + G CV+A Q + YY D SV D KE K + +KP
Sbjct: 117 TKCDANGAAPYLK-KTNPSDPTGTCVSAVDCQGSAGYYTDDSVSDAKE-CKKCAEGQKP 173
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,016,698,879
Number of Sequences: 1657284
Number of extensions: 20121472
Number of successful extensions: 53921
Number of sequences better than 10.0: 174
Number of HSP's better than 10.0 without gapping: 51273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53835
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 127960015844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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