Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_B07
         (1261 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77663-9|CAB01203.1|  239|Caenorhabditis elegans Hypothetical pr...   293   2e-79
U80030-8|AAG24166.2|  375|Caenorhabditis elegans Serpentine rece...    31   1.7  
AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPas...    30   4.0  
Z68213-3|CAA92438.1|  223|Caenorhabditis elegans Hypothetical pr...    29   5.3  
Z49130-3|CAA88968.1|  395|Caenorhabditis elegans Hypothetical pr...    29   6.9  
AC024807-3|AAK84614.1|  252|Caenorhabditis elegans Hypothetical ...    29   9.2  

>Z77663-9|CAB01203.1|  239|Caenorhabditis elegans Hypothetical
           protein F53F4.10 protein.
          Length = 239

 Score =  293 bits (719), Expect = 2e-79
 Identities = 133/214 (62%), Positives = 167/214 (78%)
 Frame = +2

Query: 200 LFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPIS 379
           L VHRDT E+N ++ F+F+  NQ+R++A++ IYPEGHK GA+IPLLDLAQRQ G WLPIS
Sbjct: 27  LMVHRDTKENNLNVKFKFTSENQERIKAIMDIYPEGHKAGALIPLLDLAQRQHG-WLPIS 85

Query: 380 AMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQET 559
           AMH+VA+IL +P+MR YEVATFYTMF R+P+GKY +QVC TTPC LRG++ I   I+++ 
Sbjct: 86  AMHEVAKILEVPRMRAYEVATFYTMFNRQPVGKYFLQVCATTPCMLRGAETITETIEKKL 145

Query: 560 NCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKP 739
               G  +  G F+++EVECLGACVNAPMIQ+NDDY+EDL+ +D  EI+  LK   KP  
Sbjct: 146 GIHAGETTKDGLFTLAEVECLGACVNAPMIQINDDYFEDLTPKDVNEILDDLKAGRKPAA 205

Query: 740 GPRSGRFASEPLGGLTSLTEEPTGPGFGVQDALK 841
           GPRSGR A+EP G LTSL E P GPGFG+Q ALK
Sbjct: 206 GPRSGRLAAEPFGELTSLKETPPGPGFGLQAALK 239


>U80030-8|AAG24166.2|  375|Caenorhabditis elegans Serpentine
           receptor, class w protein112 protein.
          Length = 375

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
 Frame = -1

Query: 892 MIYLKXSYLHKTTPDLRLECVLYS--------EARSCGFFSQRGQSSERLRRESSTPGSR 737
           +IY    YL   T  L + C+LY         E R      ++  SS   +++SS   ++
Sbjct: 217 LIYNIFFYLEGVTSKL-IPCLLYPIATVFLIIEIRKAAINRKKISSSSSSQQDSSGRTTK 275

Query: 736 FRFLILL*FADNFFCIFYRQVLIVIIIDLYHWGVHTSSQTFNL*NGKLSTRTVASNLTVC 557
             F + + F    F +    +L  I+     WG +T    F      L T T A ++ +C
Sbjct: 276 LIFYLTVIFYIGEFPMAVFYILNPILQMSIQWGFYTYLVYFEFLFSTLLTATTAIHMPIC 335

Query: 556 FLFNCIQYGIRA 521
            L +  QY I A
Sbjct: 336 LLMSS-QYKITA 346


>AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPase
           protein.
          Length = 1237

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -3

Query: 497 YILGHGIYQLVVL*TL 450
           YILGH +YQLV+L TL
Sbjct: 899 YILGHAVYQLVILFTL 914


>Z68213-3|CAA92438.1|  223|Caenorhabditis elegans Hypothetical
           protein C01F6.5 protein.
          Length = 223

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +2

Query: 680 SVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSLTEEPTGPGFGVQDALKA 844
           ++ D+  I +++K  E P+  P +GR A          + +PTG G G Q  LKA
Sbjct: 143 AIIDSANIANRVKFPEAPRRAPSNGRPAQRAPKRQNVKSGKPTG-GAGAQKKLKA 196


>Z49130-3|CAA88968.1|  395|Caenorhabditis elegans Hypothetical
           protein T06D8.5 protein.
          Length = 395

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +2

Query: 299 PEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTM 454
           P+  +R A+   L LAQ   G W+  S +       ++P++  Y +AT  TM
Sbjct: 162 PDMKRRMALATTLLLAQGGIGWWMVKSGLDPSKNSSDVPRVSQYRLATHLTM 213


>AC024807-3|AAK84614.1|  252|Caenorhabditis elegans Hypothetical
           protein Y53G8AL.3 protein.
          Length = 252

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = +2

Query: 491 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY- 667
           VC ++P  L     +  +I+   + + G N      S  +    GAC+  P I  +  Y 
Sbjct: 84  VCVSSPPPLSHHSYLETSIETSKSEQCGANRKTTSMSFQKSFVTGACLTYPFIGQSLTYR 143

Query: 668 -YEDLSVEDTKEIIS 709
             EDL+ +D  +I++
Sbjct: 144 NQEDLAAQDYSKIMT 158


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,407,337
Number of Sequences: 27780
Number of extensions: 490541
Number of successful extensions: 1371
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3505977888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)