Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_B06
         (1293 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   2.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   3.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   3.8  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 466 HHKVVSNAFFL*FFEVLSHNFNNFVQEYKHKC 371
           H K+  +AF + F  +L H F+     Y  KC
Sbjct: 141 HKKIRYSAFGMIFVALLEHCFSMLNYVYSSKC 172


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -1

Query: 420 YSVITSTILYKNTNTSAILAFFFVVDTMY 334
           ++V  S +    T T+ ++ F +V+DTMY
Sbjct: 270 FTVKISGLFEITTITAMVMWFGYVIDTMY 298


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -1

Query: 420 YSVITSTILYKNTNTSAILAFFFVVDTMY 334
           ++V  S +    T T+ ++ F +V+DTMY
Sbjct: 226 FTVKISGLFEITTITAMVMWFGYVIDTMY 254


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 256,039
Number of Sequences: 336
Number of extensions: 5473
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 38124331
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)