Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_B06
(1293 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 366 e-101
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 295 6e-80
02_05_0373 + 28374298-28374380,28375126-28375303,28375975-283760... 277 1e-74
07_03_1297 + 25587445-25587502,25587646-25587740,25588426-255886... 181 1e-45
05_04_0141 - 18364065-18364176,18364722-18364948,18365183-183653... 144 1e-34
05_03_0442 + 14040280-14040371,14040449-14040517,14041217-140413... 46 5e-05
12_02_0592 + 20868884-20868954,20869091-20869216,20869554-208698... 42 8e-04
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 34 0.28
11_04_0007 - 12074472-12074538,12074908-12075116,12077202-120774... 32 0.86
03_06_0198 - 32299480-32299643,32300084-32300126,32300843-323009... 32 1.1
05_04_0359 + 20615362-20615549,20615701-20615767,20616126-206161... 31 1.5
01_06_1397 - 37017468-37017561,37017763-37017836,37019128-370191... 31 2.0
08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686 31 2.6
12_01_0662 + 5601147-5601176,5601419-5601517,5601601-5601651,560... 30 4.6
03_02_0034 - 5166987-5167010,5167596-5167659,5168071-5168174,516... 30 4.6
09_06_0315 - 22246879-22247643,22247722-22247862,22248509-222485... 29 6.0
02_05_0376 + 28406547-28406870 29 8.0
01_06_1282 + 35972234-35972244,35972451-35972522,35972714-359727... 29 8.0
>01_06_0412 + 29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 366 bits (900), Expect = e-101
Identities = 162/290 (55%), Positives = 235/290 (81%), Gaps = 3/290 (1%)
Frame = +2
Query: 149 SAIYILDVXGKVLISRNYRGDVDLGVIDKFMPLLMEKEEEGML-TPLL-QTSECTFAYIK 322
SA+++LD+ G+VL+ R+YRGDV ++F L++KE + +P++ + T+ +I+
Sbjct: 6 SALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKEGDSEAHSPVVYDDAGVTYMFIQ 65
Query: 323 TNNLYIVSTTKKNANIALVFVFLYKIVEVMTEYFKELEEESIRDNFVVIYELLDELIDFG 502
NN+++++ +++N N A + +FL+++V+V YF+ELEEES+RDNFVV+YELLDE++DFG
Sbjct: 66 HNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFG 125
Query: 503 YPQTTDSKILQEYITQEGHKLEMQPKIPMAVTNAVSWRSEGIKYRKNEVFLDVIESVNLL 682
YPQ T++KIL E+I + +++E+ + PMAVTNAVSWRSEGI+Y+KNEVFLDV+ESVN+L
Sbjct: 126 YPQYTEAKILSEFIKTDAYRMEVSQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNIL 185
Query: 683 ANSNGNVLRSEIVGAIKMRVYLSGMPELRLGLNDKVLFESTGRG-KSKSVELEDVKFHQC 859
NSNG ++RS++VGA+KMR YLSGMPE +LGLND+VL E+ GR K K+++L+D+KFHQC
Sbjct: 186 VNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRATKGKAIDLDDIKFHQC 245
Query: 860 VRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIXIESVXERHAHXEL 1009
VRL+RFENDRTISFIPPDG F+LM+YRL+T VKPLI +E+ E+H+ +
Sbjct: 246 VRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQIEKHSRSRI 295
>05_06_0262 - 26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 295 bits (723), Expect = 6e-80
Identities = 139/290 (47%), Positives = 211/290 (72%), Gaps = 3/290 (1%)
Frame = +2
Query: 149 SAIYILDVXGKVLISRNYRGDVDLGVIDKFMPLLMEKEEEG-MLTPLLQTSE-CTFAYIK 322
SA+++LD+ G+VL+ R+YRGDV ++F L++KE + +L+P++ ++ +I+
Sbjct: 7 SALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKESDAEVLSPVVHDDAGVSYMFIQ 66
Query: 323 TNNLYIVSTTKKNANIALVFVFLYKIVEVMTEYFKELEEESIRDNFVVIYELLDELIDFG 502
NN+++++ +++N N A + +FL+++V+V YF+ELEEES+RDNFVV+YELLDE++DFG
Sbjct: 67 HNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFG 126
Query: 503 YPQTTDSKILQEYITQEGHKLEMQPKIPMAVTNAVSWRSEGIKYRKNEVFLDVIESVNLL 682
YPQ T++ IL E+I + +++ EVFLDV+ESVN+L
Sbjct: 127 YPQYTEAMILSEFIKTDAYRM--------------------------EVFLDVVESVNIL 160
Query: 683 ANSNGNVLRSEIVGAIKMRVYLSGMPELRLGLNDKVLFESTGRG-KSKSVELEDVKFHQC 859
NSNG ++RS+++G +KMR +LSGMPE +LGLND+VL E+ GR K K+++L+D+KFHQC
Sbjct: 161 VNSNGQIVRSDVIGELKMRTFLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLDDIKFHQC 220
Query: 860 VRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIXIESVXERHAHXEL 1009
VRL+RFENDRTISFIPPDG F+LM+YRL+T VKPLI +E+ E+H+ +
Sbjct: 221 VRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQVEKHSRSRI 270
>02_05_0373 +
28374298-28374380,28375126-28375303,28375975-28376065,
28376162-28376256,28376379-28376468,28376789-28376837,
28376941-28377079,28377224-28377340,28377437-28377527,
28377604-28377746,28378009-28378123,28378439-28378483,
28378565-28378645
Length = 438
Score = 277 bits (679), Expect = 1e-74
Identities = 142/299 (47%), Positives = 201/299 (67%), Gaps = 16/299 (5%)
Frame = +2
Query: 140 MSSSAIYILDVXGKVLISRNYRGDVDLGVIDKFMPLLMEKEEEGMLTPLLQTSECTFAYI 319
+++SAIY L++ G VLI+R YR DV ++D F +M+ +E G P+ Q C+F Y+
Sbjct: 3 VAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRMHIMQTKELGTC-PVRQIGGCSFLYM 61
Query: 320 KTNNLYIVSTTKKNANIALVFVFLYKIVEVMTEYFK-ELEEESIRDNFVVIYELLDELID 496
+ +N+YIV NAN+A F F+ + V + YF +E++IR+NFV+IYELLDE++D
Sbjct: 62 RISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMD 121
Query: 497 FGYPQTTDSKILQEYITQEGHKLEMQPK-----IPMA---VTNAVSWRSEGIKYRKNEVF 652
FGYPQ +IL+ YITQEG + K +P A VT AV WR EG+ Y+KNEVF
Sbjct: 122 FGYPQNLSPEILKLYITQEGVRSPFSSKPSDKPVPNATLQVTGAVGWRREGLMYKKNEVF 181
Query: 653 LDVIESVNLLANSNGNVLRSEIVGAIKMRVYLSGMPELRLGLNDKVLFESTGRGKS---- 820
LD++ESVNLL +S G+VLR ++ G I M+ +LSGMP+L+LGLNDK+ E + KS
Sbjct: 182 LDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKEAQLKSRPAK 241
Query: 821 --KSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVK-PLIXIESVXE 988
K++EL+DV FHQCV L+RF +++T+SF+PPDGEFELM YR+ V P + ++ E
Sbjct: 242 SGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKE 300
>07_03_1297 +
25587445-25587502,25587646-25587740,25588426-25588629,
25588843-25588959,25589084-25589212,25589591-25589717,
25590174-25590277,25590369-25590473,25590969-25591190,
25591869-25591967
Length = 419
Score = 181 bits (441), Expect = 1e-45
Identities = 108/306 (35%), Positives = 169/306 (55%), Gaps = 26/306 (8%)
Frame = +2
Query: 149 SAIYILDVXGKVLISRNYRGDVDLGVIDKFMPLLM--EKEEEGMLTPLLQTSECTFAYIK 322
S ++L G ++ R+YRG+V G + F + +E P+ + ++K
Sbjct: 3 SQFFVLSQRGDHIVFRDYRGEVPKGSAEIFFRKVKFWNDDEAEEAPPVFNVDGVNYIHVK 62
Query: 323 TNNLYIVSTTKKNANIALVFVFLYKIVEVMTEYFKELEEESIRDNFVVIYELLDELIDFG 502
L+ V TT N + +L+ L +I V +Y L E+S+R NF+++YELLDE+IDFG
Sbjct: 63 VAGLFFVVTTMVNVSPSLLLELLQRIARVTKDYLGVLNEDSLRKNFILVYELLDEVIDFG 122
Query: 503 YPQTTDSKILQEYITQE------GHKLEMQP---------KIP-MAVTNAVSWRSEGIKY 634
YPQTT +++L+ YI E G + P ++P AVT +V G K
Sbjct: 123 YPQTTSTEVLKSYIFNEPIMVDAGRLPPLGPAAMFMQGTKRMPGTAVTKSVVATEPGGK- 181
Query: 635 RKNEVFLDVIESVNLLANSNGNVLRSEIVGAIKMRVYLSGMPELRLGLNDKVLFESTGRG 814
++ E+F+D+IE +++ +S+G +L SEI G I+M+ YL+G PE+RL LN+ + TG
Sbjct: 182 KREEIFVDIIERISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRTGSS 241
Query: 815 ----KSKS----VELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIX 970
+S S V L+D FH+ V L F+ DRT+ IPPDGEF +M+YR+ KP
Sbjct: 242 SYDYRSSSGGGAVILDDCNFHESVHLDSFDIDRTLHLIPPDGEFAVMNYRITQEFKPPFR 301
Query: 971 IESVXE 988
+ ++ E
Sbjct: 302 VTALIE 307
>05_04_0141 -
18364065-18364176,18364722-18364948,18365183-18365390,
18365497-18365706,18366078-18366180,18366214-18366325,
18367061-18367204,18367835-18367936,18368081-18368186,
18368301-18368335
Length = 452
Score = 144 bits (350), Expect = 1e-34
Identities = 69/195 (35%), Positives = 119/195 (61%)
Frame = +2
Query: 359 NANIALVFVFLYKIVEVMTEYFKELEEESIRDNFVVIYELLDELIDFGYPQTTDSKILQE 538
+ N+ F FL ++ +V+T+Y +L E+ I+DNFV++Y++LDE++D G+P TT+ IL+E
Sbjct: 91 SVNMICDFQFLSRVADVLTDYLGDLNEDIIKDNFVLVYQILDEMMDNGFPLTTEPNILKE 150
Query: 539 YITQEGHKLEMQPKIPMAVTNAVSWRSEGIKYRKNEVFLDVIESVNLLANSNGNVLRSEI 718
I +M + A + V WR+ +K NEV+++++E ++ N G +++ E
Sbjct: 151 MIAPPNIVSKMLNVVTDAAASFVPWRTTVVKDASNEVYVNIVEELDACVNREGALVKCEA 210
Query: 719 VGAIKMRVYLSGMPELRLGLNDKVLFESTGRGKSKSVELEDVKFHQCVRLSRFENDRTIS 898
G I++ L G+PEL L ++ + + DV+FH CVR +E+++ +S
Sbjct: 211 YGKIQVNSSLPGVPELTLSFSNPTI-------------INDVRFHPCVRFRPWESNQILS 257
Query: 899 FIPPDGEFELMSYRL 943
F+PPDG+FELMSYR+
Sbjct: 258 FVPPDGQFELMSYRV 272
>05_03_0442 +
14040280-14040371,14040449-14040517,14041217-14041329,
14043110-14043209,14044508-14044682,14044768-14044881,
14045157-14045287,14048401-14048464,14048585-14048624,
14049002-14049225,14049634-14049876,14050145-14050313,
14050569-14050873,14051325-14051511,14051622-14051775,
14052145-14052207,14052300-14052396,14052500-14052589
Length = 809
Score = 46.4 bits (105), Expect = 5e-05
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 5/159 (3%)
Frame = +2
Query: 122 SRNCFTMSSSAIYILDVXGKVLISRNYRGDVDLGVIDKFMPLLMEKEEEGMLTPLLQTSE 301
++ M A I+ GK L+SR + D+ I+ + + G ++T
Sbjct: 280 TKKALKMVVLAASIISKSGKALVSRQFV-DMSRIRIEGLLAAFPKLVGTGKQHTYVETEN 338
Query: 302 CTFAYIKTNNLYIVSTTKKNANIALVFVFLYKIVEVMTEYFKELEEESIRDNFVVIYELL 481
+ Y LY++ T K +NI L + +++ EY L+EE + +
Sbjct: 339 VRYVYQPIEGLYLLLITNKQSNILEDLDTLRLLSKLVPEYSPSLDEEGVCKTAFELIFAF 398
Query: 482 DELIDFGYPQTTDSKILQEYITQE-----GHKLEMQPKI 583
DE I G + + +++Y E HKL MQ KI
Sbjct: 399 DEAISLGNKENVTVQQVKQYCEMESHEEKAHKLMMQSKI 437
>12_02_0592 +
20868884-20868954,20869091-20869216,20869554-20869862,
20870017-20870300,20870410-20871305,20871586-20871642,
20872293-20872340,20873046-20873114
Length = 619
Score = 42.3 bits (95), Expect = 8e-04
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +2
Query: 608 SWRSEGIKYRKNEVFLDVIESVNLLANSNGNVLRS-EIVGAIKMRVYLSGMPELRLGLND 784
+W+ K R+ +F +E++N +V + G + R L G+P++ L L+
Sbjct: 295 AWKPYLYKGRQRTLFSS-LETLNAALYDRDDVQDFLSVSGQVTCRAELEGLPDVSLPLSG 353
Query: 785 KVLFESTGRGKSKSVELEDVKFHQCVRLSRFENDR-TISFIPPDGEFELMSYRLNTHVKP 961
K+ +E FH CV+ S ND+ T+ F PP G F LM Y+ + ++ P
Sbjct: 354 L-----------KAARVEVSSFHHCVQASEPTNDKQTLIFQPPLGNFVLMHYQASCNMDP 402
>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
3536083-3536226,3536974-3537375,3537499-3537721,
3537830-3542368,3542480-3542599,3543005-3543038,
3543922-3544102,3544198-3544815,3545022-3551098,
3551139-3551304,3551508-3551614,3552056-3552178,
3553417-3553642
Length = 5100
Score = 33.9 bits (74), Expect = 0.28
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = +2
Query: 128 NCFTMSSSAIYILDVXGKVLISRNYRGDVDLGVIDKFMPLLMEKEEEGMLTPLLQTSECT 307
+C + + IY+L+ K++ N R VD+GVI K + ++M + +GM T + + +
Sbjct: 1180 SCVLVINEIIYMLNGCIKIM-QPNDRDLVDVGVISKLLSMIMTIKSDGMFTSIHKLCDSI 1238
Query: 308 F 310
F
Sbjct: 1239 F 1239
>11_04_0007 -
12074472-12074538,12074908-12075116,12077202-12077463,
12077547-12078043,12078651-12078719,12079258-12079363,
12080272-12080295,12081184-12081242,12081383-12081520
Length = 476
Score = 32.3 bits (70), Expect = 0.86
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +2
Query: 398 IVEVMTEYFKELEEESIRDNFVVIY---ELLDELIDFGYPQTTDSKILQEYITQEG 556
++ +TE+FKE +E+ D+ + + ++ D L++F S+ L E+ T+EG
Sbjct: 246 VLSFITEFFKEYLKENTLDDLIALLKKGKMEDNLLEFFPSAKRTSEALSEHFTKEG 301
>03_06_0198 -
32299480-32299643,32300084-32300126,32300843-32300929,
32301063-32301098,32301187-32301295,32301408-32301499,
32302029-32302115,32303887-32304222
Length = 317
Score = 31.9 bits (69), Expect = 1.1
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = +2
Query: 314 YIKTNNLYIVSTTKKNANIALVFVFLYKIVEVMTEYFKELEEESIRDNFVVIYELLDELI 493
Y + +LY N V ++ VEV+ YF + E + NF Y +LDE++
Sbjct: 170 YRRYASLYFCMCIDAEDNELEVLEIIHHFVEVLDRYFGSVCELDLIFNFHKAYYILDEIL 229
Query: 494 DFGYPQTTDSKILQEYITQE 553
G Q + K + I +
Sbjct: 230 IAGELQESSKKNVARLIAAQ 249
>05_04_0359 +
20615362-20615549,20615701-20615767,20616126-20616191,
20616319-20616348,20616461-20616505,20617020-20617286
Length = 220
Score = 31.5 bits (68), Expect = 1.5
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Frame = +2
Query: 461 VVIYELLDELIDFGYPQTTDSKILQEYITQEGHKL---EMQPKIPMAVTNAVS 610
VVI+ +L D+ P+TT S+IL++Y T G L + +PK +A+ A++
Sbjct: 45 VVIFSSAGKLSDYCTPKTTLSRILEKYQTNSGKILWDEKHKPKELIAIEEALN 97
>01_06_1397 -
37017468-37017561,37017763-37017836,37019128-37019193,
37019543-37019623,37019735-37019943,37020096-37020192,
37020497-37020514,37020597-37020727,37021040-37021088,
37021450-37021539,37021616-37021721,37021815-37021885,
37021963-37022037,37022059-37022120,37022677-37022887,
37023599-37024069,37024387-37024719
Length = 745
Score = 31.1 bits (67), Expect = 2.0
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Frame = +2
Query: 419 YFKELEEESIRDNFVVIYELLDELIDFGYPQTTDSKILQEYITQEGHKLEMQPKIPMAVT 598
+F+E +E +R F ++YE +EL+D Y ++ E + ++ P IP ++
Sbjct: 406 FFREFDENLLRKVFELMYE--NELLDLPYAPDVGDYLVCEDTNFAPNNKDVAP-IPEGMS 462
Query: 599 NA-VSWRSEGIKYRKNEVFLDVIESVNLLANSNGNVLR 709
A V R G+ Y +++ I S L++ +G LR
Sbjct: 463 GAEVGKRLNGLAYPRDQ---KQIPSSTRLSDDDGVALR 497
>08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686
Length = 959
Score = 30.7 bits (66), Expect = 2.6
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +2
Query: 716 IVGAIKMRVYLSGMPELRLGLNDKVLFESTGRGKSKSVELEDVKFHQCVRLSRFENDRTI 895
++G ++ R+ P LG K LF+ + ++L KF C+R+ + R I
Sbjct: 360 VLGKLRARMLAPDAPSYILGYELKELFQEVNNVDNAQLQLNPTKFFACIRVL---DARFI 416
Query: 896 SFIPPDGEFELMSYRLN 946
S D EL+ + LN
Sbjct: 417 SSDMQDSH-ELLCFLLN 432
>12_01_0662 +
5601147-5601176,5601419-5601517,5601601-5601651,
5602822-5602995,5603869-5603928,5604759-5604800
Length = 151
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +2
Query: 389 LYKIVEVMTEYFKELEEESIRDNFVVIYELLDELIDFGYPQTTDSKILQEYITQEGHKLE 568
++ VE++ +F + E + NF +Y +LDE I G Q T + + E + E KLE
Sbjct: 93 IHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKRAIIERM-GELEKLE 151
>03_02_0034 -
5166987-5167010,5167596-5167659,5168071-5168174,
5168685-5168829,5168914-5169055,5169432-5169751,
5169895-5170196,5170603-5170647,5171218-5171268,
5171374-5171460,5171587-5171764,5172453-5172528,
5173018-5173234,5173604-5173909
Length = 686
Score = 29.9 bits (64), Expect = 4.6
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +2
Query: 494 DFGYPQTTDSKILQEYITQEGHKLEMQPKIPMAVTNAVSWRSEGIKYRKNEVFLDVIESV 673
++G P D K+ E +T E+ I + + +G Y F D + +
Sbjct: 538 EWGVPVHDDQKLF-ELLTLSQALAEITWPIILNKRDEFREMFDGFNYASVSEFTD--KKI 594
Query: 674 NLLANSNGNVLRSE 715
NLL+ SNGN+L SE
Sbjct: 595 NLLSKSNGNMLLSE 608
>09_06_0315 -
22246879-22247643,22247722-22247862,22248509-22248561,
22248755-22248919,22249685-22249799,22249937-22250025,
22250578-22250608
Length = 452
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 852 WNFTSSNSTDFDFPLPVLSNKTLS 781
W T SNSTDF P++ N L+
Sbjct: 152 WTITKSNSTDFSLTTPIVINTMLA 175
>02_05_0376 + 28406547-28406870
Length = 107
Score = 29.1 bits (62), Expect = 8.0
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 254 PSVKA*ICRSHPDQHHHGNFSK 189
PS KA ICR+ P HHHG S+
Sbjct: 6 PSCKATICRT-PGNHHHGTTSE 26
>01_06_1282 +
35972234-35972244,35972451-35972522,35972714-35972747,
35973247-35973360,35974833-35975036,35975290-35975449,
35976093-35976240,35976345-35976422,35976854-35976938,
35977142-35977213
Length = 325
Score = 29.1 bits (62), Expect = 8.0
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 452 DNFVVIYELLDELIDFGYPQTTDSKILQEYITQEGHKLE 568
+N +I+ LDE++D G TD+K + E ++ GH LE
Sbjct: 258 ENLDLIFLCLDEVVDGGIVLETDAKAILEKVS--GHGLE 294
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,340,417
Number of Sequences: 37544
Number of extensions: 524955
Number of successful extensions: 1071
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4027319592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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