Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_B06
         (1293 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    26   2.1  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   3.6  
AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    24   8.4  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 16/67 (23%), Positives = 33/67 (49%)
 Frame = +2

Query: 311 AYIKTNNLYIVSTTKKNANIALVFVFLYKIVEVMTEYFKELEEESIRDNFVVIYELLDEL 490
           A + T+N+ +   TKK AN+ L+    +K+        K L++ +++     +   + E 
Sbjct: 276 AVLPTDNIDVYRLTKKGANLDLMSFISFKV-----SIPKSLKDLALQSTIWPVSLTVREF 330

Query: 491 IDFGYPQ 511
           +D G P+
Sbjct: 331 VDRGLPK 337


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 25.4 bits (53), Expect = 3.6
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
 Frame = -1

Query: 369 ILAFFFVVDTMYKLLVL-I*ANVHSLVCNKGVNIPSSSFSISKGMNLSITPRSTSPR*FL 193
           ++A FF+   +Y L+++ +   +   V   G+  PSS F ++  + + IT     P+   
Sbjct: 629 LIAAFFI-SAIYSLVMMAVLVGIVVQVMEDGILAPSSVFFLAVALQIVIT-GVLHPQ--- 683

Query: 192 EMRTLPLTSSMYIAEEDMVKQFLLY 118
           EM  LP     YI    M    ++Y
Sbjct: 684 EMEALPAGLVYYITIPSMYMLLVIY 708


>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 24.2 bits (50), Expect = 8.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 864 DYHVLKMIGPSHLYPLMVN 920
           D+ VLK + P H  P +V+
Sbjct: 38  DFEVLKKVNPQHTIPTLVD 56


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,103,362
Number of Sequences: 2352
Number of extensions: 21824
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 148783908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)