Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_B04
(1293 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 40 0.004
12_02_0299 - 17051570-17052474,17053542-17053755 38 0.013
02_05_0686 - 30900748-30902167,30903442-30904742 38 0.017
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 35 0.16
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 34 0.28
01_05_0490 + 22672241-22674679 34 0.28
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 33 0.37
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047... 33 0.49
09_02_0603 - 11150739-11150746,11150791-11151340 31 2.0
07_01_0479 + 3606663-3607448 31 2.0
12_01_0292 + 2193309-2193338,2193565-2193640,2193744-2195203,219... 30 3.5
12_02_1174 - 26696869-26698191 29 8.0
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 39.9 bits (89), Expect = 0.004
Identities = 27/95 (28%), Positives = 32/95 (33%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVX 553
PP PPP + P P + PP G PPP PPP
Sbjct: 19 PPQPPPMNPYGPPPPQQPA--YGHMPPPQGA--PPPFLAPPPPPPPGPPPPHQPQFNFGP 74
Query: 552 XPKIXPXXPPGXGFFFXGKXXPPPPPXGKKKXXPP 448
P PP ++ + PPPPP G PP
Sbjct: 75 GPPQQQQPPPPPQMYY--QPPPPPPPYGVNSSQPP 107
Score = 36.7 bits (81), Expect = 0.040
Identities = 29/97 (29%), Positives = 32/97 (32%), Gaps = 2/97 (2%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVX 553
PP PPP P P F F PP P PPP PPP +
Sbjct: 54 PPPPPPPGPPPPHQPQ---FNFGPGPPQQQQPPPPPQMYYQPPPPPP------PYGVNSS 104
Query: 552 XPKIXPXXPPGXGFFFXGKXXPPP--PPXGKKKXXPP 448
P P PP PPP PP + + PP
Sbjct: 105 QPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPP 141
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 38.3 bits (85), Expect = 0.013
Identities = 32/113 (28%), Positives = 32/113 (28%), Gaps = 1/113 (0%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVX 553
PP P P F P F PP PFP P P P F
Sbjct: 210 PPWPWPPIPFCTPRPWFPPIPFLTPPPPPFLPFPLPPIPFLTPPSPPPPAFPFPLPPWPW 269
Query: 552 XPKIXPXXP-PGXGFFFXGKXXPPPPPXGKKKXXPPXXXXXFFPPXXFFQKXP 397
P P P P F PPPPP P FPP F P
Sbjct: 270 AP--PPAFPFPHLPPIFSPPSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSP 320
Score = 37.5 bits (83), Expect = 0.023
Identities = 31/105 (29%), Positives = 33/105 (31%), Gaps = 1/105 (0%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVX 553
PP PPP P P PP P PP PPP F F
Sbjct: 252 PPSPPPPAFPFPLPPWPWA-----PPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFPQL-- 304
Query: 552 XPKIXPXXPPGXGFF-FXGKXXPPPPPXGKKKXXPPXXXXXFFPP 421
P + P PP F+ PPPPP P FPP
Sbjct: 305 -PPL-PHFPPLPSFYPSPPPPPPPPPPPPPSFPWPFPPLAPLFPP 347
Score = 31.9 bits (69), Expect = 1.1
Identities = 24/70 (34%), Positives = 25/70 (35%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVX 553
PP PPP F PF F P F P PPP PPP F A +
Sbjct: 290 PPPPPPAFPF-PFPQLPPLPHFPPLPSFYPSPPPPP---PPPPPPPPSFPWPFPPLAPLF 345
Query: 552 XPKIXPXXPP 523
P P PP
Sbjct: 346 PP--YPSPPP 353
Score = 30.3 bits (65), Expect = 3.5
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = -2
Query: 1130 FXPPXXPXFFXXXTPGXPXXKXFFFPGGXXXXXPXXXPPXXPXGXFSPXPPXXGXPPPXF 951
F P P F +P P F FP P P P PP PPP F
Sbjct: 275 FPFPHLPPIFSPPSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSF 334
Query: 950 XXXXP 936
P
Sbjct: 335 PWPFP 339
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 37.9 bits (84), Expect = 0.017
Identities = 30/95 (31%), Positives = 30/95 (31%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVX 553
PP PPP P PP G P PPP G PPP
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKG------------ 361
Query: 552 XPKIXPXXPPGXGFFFXGKXXPPPPPXGKKKXXPP 448
P P PPG K PPPPP PP
Sbjct: 362 -PSPPPPPPPGGK-----KGGPPPPPPKGGASRPP 390
Score = 29.1 bits (62), Expect = 8.0
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -2
Query: 1031 PXXXPPXXPXGXFSPXPPXXGXPPPXFXXXXPXXXXKPPLXXXGG 897
P PP P P PP G PPP PP GG
Sbjct: 332 PKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGG 376
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 34.7 bits (76), Expect = 0.16
Identities = 33/134 (24%), Positives = 36/134 (26%), Gaps = 4/134 (2%)
Frame = -1
Query: 849 PPGFXXGXTPXFFFXXGXPPPXXXXXXXXXXXXXXXXXXPPXPPPXXXFXPFXPXGXX-- 676
PP G P F PPP PP PP P P
Sbjct: 550 PPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPP 609
Query: 675 --FFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVXXPKIXPXXPPGXGFFFX 502
PP P PPP PPP + + P PG G F
Sbjct: 610 PILPNRSVPP--PPPPPPPLPNHSVLPPPPPPPP----PPSLPNRLVPPPPAPGIGNKFP 663
Query: 501 GKXXPPPPPXGKKK 460
PPPPP +
Sbjct: 664 APPPPPPPPRSSSR 677
Score = 34.3 bits (75), Expect = 0.21
Identities = 29/103 (28%), Positives = 30/103 (29%), Gaps = 8/103 (7%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPP------PXXGXXXXPPPXXXXXFFX 571
PP PPP P G PP P PP P PPP
Sbjct: 665 PPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPPPPPPANRS 724
Query: 570 FXAXVXXPKIXPXXPPGXGFFFXGKXXPPPPP--XGKKKXXPP 448
P + P P PPPPP GKK PP
Sbjct: 725 NGPSAPAPPLPPPLPAAAN--KRNPPAPPPPPLMTGKKAPAPP 765
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 33.9 bits (74), Expect = 0.28
Identities = 31/110 (28%), Positives = 33/110 (30%), Gaps = 6/110 (5%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGX---PFPPPXXGXXXXPPPXXXXXFFXFXA 562
PP PPP P + PP G P PPP G PPP A
Sbjct: 1082 PPLPPP------LPPTLGDYGVAPPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQA 1135
Query: 561 XVXXP---KIXPXXPPGXGFFFXGKXXPPPPPXGKKKXXPPXXXXXFFPP 421
P I PP G PPPP + PP PP
Sbjct: 1136 PPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPP 1185
Score = 32.7 bits (71), Expect = 0.65
Identities = 28/98 (28%), Positives = 29/98 (29%), Gaps = 3/98 (3%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPP---FXGXPFPPPXXGXXXXPPPXXXXXFFXFXA 562
PP P P P G PP F G PP G PPP
Sbjct: 1139 PPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGP 1198
Query: 561 XVXXPKIXPXXPPGXGFFFXGKXXPPPPPXGKKKXXPP 448
P PPG PPPPP G+ PP
Sbjct: 1199 PTPPGAPAPPMPPGV------PGGPPPPPGGRGLPAPP 1230
>01_05_0490 + 22672241-22674679
Length = 812
Score = 33.9 bits (74), Expect = 0.28
Identities = 19/67 (28%), Positives = 21/67 (31%)
Frame = -1
Query: 795 PPPXXXXXXXXXXXXXXXXXXPPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXG 616
PPP PP PPP PF P ++ P P PPP
Sbjct: 643 PPPPPTTRRSRKPPQPPSRPAPPPPPPPQQQPPFYPRRAVVYYTYPLPPPSPPLPPP--- 699
Query: 615 XXXXPPP 595
PPP
Sbjct: 700 PPPPPPP 706
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 33.5 bits (73), Expect = 0.37
Identities = 24/83 (28%), Positives = 26/83 (31%)
Frame = -1
Query: 729 PXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVXX 550
P PPP + P P G PP+ P PPP PPP
Sbjct: 423 PPPPPPGSYAPV-PWGQP------PPYASYPPPPPGSSMYNPPPPAPGQATPPPYGVQYA 475
Query: 549 PKIXPXXPPGXGFFFXGKXXPPP 481
P P PPG G PP
Sbjct: 476 PPPAPIPPPGTAPSTDGAQNYPP 498
>07_03_1530 + 27502546-27502671,27503487-27503561,27504670-27504746,
27505576-27507522,27508478-27508946,27509898-27510079,
27510746-27511208,27511295-27511691,27511810-27511937,
27512106-27512273,27512452-27512559,27512830-27512838
Length = 1382
Score = 33.1 bits (72), Expect = 0.49
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 6/52 (11%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPF------PPPXXGXXXXPPP 595
PP PPP PF P G F PP G + PPP PPP
Sbjct: 1162 PPLPPPPPV-APFHPPGPHFSGPSVPPHHGNNYHQPPSVPPPNNAYHLQPPP 1212
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPP 595
PP PPP F P G PP G F PP PPP
Sbjct: 44 PPPPPPGSTFVPLPQSG-----VPPPPPLGSFFVPPPQSRVPPPPP 84
>07_01_0479 + 3606663-3607448
Length = 261
Score = 31.1 bits (67), Expect = 2.0
Identities = 26/87 (29%), Positives = 27/87 (31%), Gaps = 4/87 (4%)
Frame = -1
Query: 723 PPPXXXFXPFXPXGXXFFFXXXP----PFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXV 556
PPP P P F P F G P PPP PPP
Sbjct: 169 PPPGQMPPPMRPPQMPIPFQRPPGVPPAFPGGP-PPPPGPFMRGPPPMGPPQVRPGMPGG 227
Query: 555 XXPKIXPXXPPGXGFFFXGKXXPPPPP 475
P + P PP F G PPP P
Sbjct: 228 PPPGMRPGMPPPP--FRPGMPPPPPGP 252
>12_01_0292 +
2193309-2193338,2193565-2193640,2193744-2195203,
2195479-2195505,2195794-2196024,2196523-2196692,
2197278-2197421,2198036-2198083,2198503-2198566
Length = 749
Score = 30.3 bits (65), Expect = 3.5
Identities = 18/64 (28%), Positives = 21/64 (32%)
Frame = +2
Query: 509 KXPXPGGXXGXIXGXXTCAXKXKKXXXXXGGGXXXXPXXGGGNGXPXKGGXXXKKXFXPX 688
K P G G + +K GGG P GGG G P G +K
Sbjct: 66 KAGKPAELWGSKVGVAAVNNQFQKLHLDGGGGGKGQPKDGGGKGHPKDAGGKGQKGGGGG 125
Query: 689 GXKG 700
G G
Sbjct: 126 GGNG 129
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.1 bits (62), Expect = 8.0
Identities = 29/104 (27%), Positives = 29/104 (27%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVX 553
PP PPP P PP P PPP PP V
Sbjct: 124 PPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPP--------VV 175
Query: 552 XPKIXPXXPPGXGFFFXGKXXPPPPPXGKKKXXPPXXXXXFFPP 421
PK P PP PPPPP PP PP
Sbjct: 176 QPK--PQPPPS----LQPPSPPPPPPTRPPSVKPPVVQPKPQPP 213
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.148 0.478
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,954,925
Number of Sequences: 37544
Number of extensions: 476157
Number of successful extensions: 1443
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4027319592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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