Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_B04
(1293 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.047
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.047
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.062
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.062
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.062
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 35 0.11
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 35 0.14
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.33
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.33
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.33
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 33 0.44
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 33 0.44
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 32 1.0
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 1.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 3.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 4.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 4.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 9.5
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 36.3 bits (80), Expect = 0.047
Identities = 27/87 (31%), Positives = 28/87 (32%), Gaps = 1/87 (1%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVX 553
PP PPP P P P P PPP G PPP
Sbjct: 261 PPVPPPPPSVTPMPPP-----MPPTPGMTPRPPPPPSSGMWPPPPPPPPG---RTPGPPG 312
Query: 552 XPKIXPXXPPG-XGFFFXGKXXPPPPP 475
P + P PP G G PPPPP
Sbjct: 313 MPGMPPPPPPSRFGPPGMGGMPPPPPP 339
Score = 32.3 bits (70), Expect = 0.77
Identities = 27/87 (31%), Positives = 29/87 (33%), Gaps = 1/87 (1%)
Frame = -1
Query: 732 PPXPP-PXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXV 556
PP PP P P P + PP G PP G PPP F
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP--GMPGMPPPPPPSRFGPPGMGG 332
Query: 555 XXPKIXPXXPPGXGFFFXGKXXPPPPP 475
P PP G + G PPPPP
Sbjct: 333 MPP------PPPPGMRYPGGMPPPPPP 353
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 36.3 bits (80), Expect = 0.047
Identities = 27/87 (31%), Positives = 28/87 (32%), Gaps = 1/87 (1%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVX 553
PP PPP P P P P PPP G PPP
Sbjct: 271 PPVPPPPPSVTPMPPP-----MPPTPGMTPRPPPPPSSGMWPPPPPPPPG---RTPGPPG 322
Query: 552 XPKIXPXXPPG-XGFFFXGKXXPPPPP 475
P + P PP G G PPPPP
Sbjct: 323 MPGMPPPPPPSRFGPPGMGGMPPPPPP 349
Score = 32.3 bits (70), Expect = 0.77
Identities = 27/87 (31%), Positives = 29/87 (33%), Gaps = 1/87 (1%)
Frame = -1
Query: 732 PPXPP-PXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXV 556
PP PP P P P + PP G PP G PPP F
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP--GMPGMPPPPPPSRFGPPGMGG 342
Query: 555 XXPKIXPXXPPGXGFFFXGKXXPPPPP 475
P PP G + G PPPPP
Sbjct: 343 MPP------PPPPGMRYPGGMPPPPPP 363
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.9 bits (79), Expect = 0.062
Identities = 27/83 (32%), Positives = 28/83 (33%), Gaps = 4/83 (4%)
Frame = -1
Query: 657 PPFXGXPFPPPXXGXXXX----PPPXXXXXFFXFXAXVXXPKIXPXXPPGXGFFFXGKXX 490
PP G P PPP G PPP + P P PPG
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPGG----CPPPP 772
Query: 489 PPPPPXGKKKXXPPXXXXXFFPP 421
PPPPP G K PP F P
Sbjct: 773 PPPPPGGFKGGPPPPPPPGMFAP 795
Score = 33.9 bits (74), Expect = 0.25
Identities = 29/110 (26%), Positives = 29/110 (26%)
Frame = -1
Query: 1017 PXXXXGGXFXXPPXXGGXPPXXFXXXPXXXXKTPPXXXGGXGXGFFFFXXXXXXXGPPGF 838
P GG PP GG PP P PP GG G P
Sbjct: 696 PSTSAGGSSALPPITGGPPPPP-GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI 754
Query: 837 XXGXTPXFFFXXGXPPPXXXXXXXXXXXXXXXXXXPPXPPPXXXFXPFXP 688
G P PPP PP PPP F P P
Sbjct: 755 SGGPPPP------PPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 33.5 bits (73), Expect = 0.33
Identities = 23/70 (32%), Positives = 23/70 (32%)
Frame = -1
Query: 657 PPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVXXPKIXPXXPPGXGFFFXGKXXPPPP 478
PP G P PPP PP P P PPG G PPPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP---PPPPPGGLPPISGGPPPPPP 763
Query: 477 PXGKKKXXPP 448
P G PP
Sbjct: 764 PPGGCPPPPP 773
Score = 31.9 bits (69), Expect = 1.0
Identities = 22/77 (28%), Positives = 22/77 (28%), Gaps = 3/77 (3%)
Frame = +2
Query: 830 PXXXPGGPXXXXXXXKKKXPXPXPPXXXGGVXXXXXGXXXKXXGGXPPXX---GGXXKXP 1000
P PG P P PP G G GG PP GG P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 1001 PXXXXGGXKXGXXXXXP 1051
P GG K G P
Sbjct: 773 PPPPPGGFKGGPPPPPP 789
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -2
Query: 1124 PPXXPXFFXXXTPGXPXXKXFFFPGGXXXXXPXXXPPXXPXGXFSPXPPXXGXPPP 957
PP P P P GG P P G P PP G PPP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 29.1 bits (62), Expect = 7.2
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 3/73 (4%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXX---GXXXXPPPXXXXXFFXFXA 562
PP PPP P PP G P PPP G PPP F A
Sbjct: 742 PPPPPPPGGLPPISGGPPP----PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMA 797
Query: 561 XVXXPKIXPXXPP 523
V + P P
Sbjct: 798 PVIPDYLPPKKVP 810
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.9 bits (79), Expect = 0.062
Identities = 27/83 (32%), Positives = 28/83 (33%), Gaps = 4/83 (4%)
Frame = -1
Query: 657 PPFXGXPFPPPXXGXXXX----PPPXXXXXFFXFXAXVXXPKIXPXXPPGXGFFFXGKXX 490
PP G P PPP G PPP + P P PPG
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPGG----CPPPP 772
Query: 489 PPPPPXGKKKXXPPXXXXXFFPP 421
PPPPP G K PP F P
Sbjct: 773 PPPPPGGFKGGPPPPPPPGMFAP 795
Score = 33.9 bits (74), Expect = 0.25
Identities = 29/110 (26%), Positives = 29/110 (26%)
Frame = -1
Query: 1017 PXXXXGGXFXXPPXXGGXPPXXFXXXPXXXXKTPPXXXGGXGXGFFFFXXXXXXXGPPGF 838
P GG PP GG PP P PP GG G P
Sbjct: 696 PSTSAGGSSALPPITGGPPPPP-GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI 754
Query: 837 XXGXTPXFFFXXGXPPPXXXXXXXXXXXXXXXXXXPPXPPPXXXFXPFXP 688
G P PPP PP PPP F P P
Sbjct: 755 SGGPPPP------PPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 33.5 bits (73), Expect = 0.33
Identities = 23/70 (32%), Positives = 23/70 (32%)
Frame = -1
Query: 657 PPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVXXPKIXPXXPPGXGFFFXGKXXPPPP 478
PP G P PPP PP P P PPG G PPPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP---PPPPPGGLPPISGGPPPPPP 763
Query: 477 PXGKKKXXPP 448
P G PP
Sbjct: 764 PPGGCPPPPP 773
Score = 31.9 bits (69), Expect = 1.0
Identities = 22/77 (28%), Positives = 22/77 (28%), Gaps = 3/77 (3%)
Frame = +2
Query: 830 PXXXPGGPXXXXXXXKKKXPXPXPPXXXGGVXXXXXGXXXKXXGGXPPXX---GGXXKXP 1000
P PG P P PP G G GG PP GG P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 1001 PXXXXGGXKXGXXXXXP 1051
P GG K G P
Sbjct: 773 PPPPPGGFKGGPPPPPP 789
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -2
Query: 1124 PPXXPXFFXXXTPGXPXXKXFFFPGGXXXXXPXXXPPXXPXGXFSPXPPXXGXPPP 957
PP P P P GG P P G P PP G PPP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 29.1 bits (62), Expect = 7.2
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 3/73 (4%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXX---GXXXXPPPXXXXXFFXFXA 562
PP PPP P PP G P PPP G PPP F A
Sbjct: 742 PPPPPPPGGLPPISGGPPP----PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMA 797
Query: 561 XVXXPKIXPXXPP 523
V + P P
Sbjct: 798 PVIPDYLPPKKVP 810
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.9 bits (79), Expect = 0.062
Identities = 27/83 (32%), Positives = 28/83 (33%), Gaps = 4/83 (4%)
Frame = -1
Query: 657 PPFXGXPFPPPXXGXXXX----PPPXXXXXFFXFXAXVXXPKIXPXXPPGXGFFFXGKXX 490
PP G P PPP G PPP + P P PPG
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPGG----CPPPP 355
Query: 489 PPPPPXGKKKXXPPXXXXXFFPP 421
PPPPP G K PP F P
Sbjct: 356 PPPPPGGFKGGPPPPPPPGMFAP 378
Score = 33.9 bits (74), Expect = 0.25
Identities = 29/110 (26%), Positives = 29/110 (26%)
Frame = -1
Query: 1017 PXXXXGGXFXXPPXXGGXPPXXFXXXPXXXXKTPPXXXGGXGXGFFFFXXXXXXXGPPGF 838
P GG PP GG PP P PP GG G P
Sbjct: 279 PSTSAGGSSALPPITGGPPPPP-GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI 337
Query: 837 XXGXTPXFFFXXGXPPPXXXXXXXXXXXXXXXXXXPPXPPPXXXFXPFXP 688
G P PPP PP PPP F P P
Sbjct: 338 SGGPPPP------PPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 33.5 bits (73), Expect = 0.33
Identities = 23/70 (32%), Positives = 23/70 (32%)
Frame = -1
Query: 657 PPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVXXPKIXPXXPPGXGFFFXGKXXPPPP 478
PP G P PPP PP P P PPG G PPPP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP---PPPPPGGLPPISGGPPPPPP 346
Query: 477 PXGKKKXXPP 448
P G PP
Sbjct: 347 PPGGCPPPPP 356
Score = 31.9 bits (69), Expect = 1.0
Identities = 22/77 (28%), Positives = 22/77 (28%), Gaps = 3/77 (3%)
Frame = +2
Query: 830 PXXXPGGPXXXXXXXKKKXPXPXPPXXXGGVXXXXXGXXXKXXGGXPPXX---GGXXKXP 1000
P PG P P PP G G GG PP GG P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 1001 PXXXXGGXKXGXXXXXP 1051
P GG K G P
Sbjct: 356 PPPPPGGFKGGPPPPPP 372
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -2
Query: 1124 PPXXPXFFXXXTPGXPXXKXFFFPGGXXXXXPXXXPPXXPXGXFSPXPPXXGXPPP 957
PP P P P GG P P G P PP G PPP
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Score = 29.1 bits (62), Expect = 7.2
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 3/73 (4%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXX---GXXXXPPPXXXXXFFXFXA 562
PP PPP P PP G P PPP G PPP F A
Sbjct: 325 PPPPPPPGGLPPISGGPPP----PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMA 380
Query: 561 XVXXPKIXPXXPP 523
V + P P
Sbjct: 381 PVIPDYLPPKKVP 393
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 35.1 bits (77), Expect = 0.11
Identities = 38/156 (24%), Positives = 38/156 (24%), Gaps = 4/156 (2%)
Frame = -1
Query: 1032 PXFXPPXXXXGGXFXXPPXXGGXPPXXFXXXP--XXXXKTPPXXXGGXGXGFFFFXXXXX 859
P F PP G PP PP F P PP G F
Sbjct: 18 PFFLPPPPCFGIGCNQPPIVIAGPPPCFDCPPPAPIFVAPPPPPCFGPACPPPCFGPACV 77
Query: 858 XXGPPGFXXGXTPXFFFXXGXPPPXXXXXXXXXXXXXXXXXXPPXPP--PXXXFXPFXPX 685
P G P F PPP P P P F P
Sbjct: 78 PLAPI-IVNGPPPC--FGPACPPPCFGPACAPPAPIIVNGPPPCFGPACPPPCFGPACAP 134
Query: 684 GXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXF 577
PP G PPP G PPP F
Sbjct: 135 SAPIIVNGPPPCFGPACPPPCFGPACAPPPPAPILF 170
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 34.7 bits (76), Expect = 0.14
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 4/67 (5%)
Frame = -2
Query: 1145 PXXXFFXPPXXPXFFXXXTPGXPXXKXFFFPGGXXXXXPXXX----PPXXPXGXFSPXPP 978
P FF PP P F PG PGG P PP G P PP
Sbjct: 59 PKPSFFIPPPVPNGFIPPPPG---------PGGIPPPPPMFAGGIPPPPPMMGGIPPPPP 109
Query: 977 XXGXPPP 957
G PPP
Sbjct: 110 MFGAPPP 116
Score = 33.9 bits (74), Expect = 0.25
Identities = 26/84 (30%), Positives = 27/84 (32%)
Frame = -1
Query: 720 PPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVXXPKI 541
PP P FF P G PPP G PPP F P +
Sbjct: 47 PPSGILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPP-----MFAGGIPPPPPMM 101
Query: 540 XPXXPPGXGFFFXGKXXPPPPPXG 469
PP F G PPPPP G
Sbjct: 102 GGIPPPPPMF---GAPPPPPPPSG 122
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.33
Identities = 32/118 (27%), Positives = 36/118 (30%), Gaps = 4/118 (3%)
Frame = -1
Query: 801 GXPPPXXXXXXXXXXXXXXXXXXPPX----PPPXXXFXPFXPXGXXFFFXXXPPFXGXPF 634
G PPP PP PPP P P G PP G
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP-----PPPPAGGSP 289
Query: 633 PPPXXGXXXXPPPXXXXXFFXFXAXVXXPKIXPXXPPGXGFFFXGKXXPPPPPXGKKK 460
PPP G PPP + P+ PP G PPPPP K++
Sbjct: 290 PPPRAGSPPPPPPPRGS---PPTGSLPPPQAGGSPPPA------GTGSPPPPPRQKRQ 338
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.33
Identities = 32/118 (27%), Positives = 36/118 (30%), Gaps = 4/118 (3%)
Frame = -1
Query: 801 GXPPPXXXXXXXXXXXXXXXXXXPPX----PPPXXXFXPFXPXGXXFFFXXXPPFXGXPF 634
G PPP PP PPP P P G PP G
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP-----PPPPAGGSP 310
Query: 633 PPPXXGXXXXPPPXXXXXFFXFXAXVXXPKIXPXXPPGXGFFFXGKXXPPPPPXGKKK 460
PPP G PPP + P+ PP G PPPPP K++
Sbjct: 311 PPPRAGSPPPPPPPRGS---PPTGSLPPPQAGGSPPPA------GTGSPPPPPRQKRQ 359
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.33
Identities = 32/118 (27%), Positives = 36/118 (30%), Gaps = 4/118 (3%)
Frame = -1
Query: 801 GXPPPXXXXXXXXXXXXXXXXXXPPX----PPPXXXFXPFXPXGXXFFFXXXPPFXGXPF 634
G PPP PP PPP P P G PP G
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP-----PPPPAGGSP 295
Query: 633 PPPXXGXXXXPPPXXXXXFFXFXAXVXXPKIXPXXPPGXGFFFXGKXXPPPPPXGKKK 460
PPP G PPP + P+ PP G PPPPP K++
Sbjct: 296 PPPRAGSPPPPPPPRGS---PPTGSLPPPQAGGSPPPA------GTGSPPPPPRQKRQ 344
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 33.1 bits (72), Expect = 0.44
Identities = 27/98 (27%), Positives = 29/98 (29%), Gaps = 4/98 (4%)
Frame = -1
Query: 729 PXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVXX 550
P PP P+ F F PP P PPP PPP F
Sbjct: 275 PYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPP-----FMPPPPHFGM 329
Query: 549 PKIXPXXPPGXGFFFXG----KXXPPPPPXGKKKXXPP 448
PP F G PPPPP + PP
Sbjct: 330 GPPRGFMPPPHPMMFRGGPYPPFFPPPPPHFMRPSSPP 367
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 33.1 bits (72), Expect = 0.44
Identities = 27/98 (27%), Positives = 29/98 (29%), Gaps = 4/98 (4%)
Frame = -1
Query: 729 PXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVXX 550
P PP P+ F F PP P PPP PPP F
Sbjct: 275 PYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPP-----FMPPPPHFGM 329
Query: 549 PKIXPXXPPGXGFFFXG----KXXPPPPPXGKKKXXPP 448
PP F G PPPPP + PP
Sbjct: 330 GPPRGFMPPPHPMMFRGGPYPPFFPPPPPHFMRPSSPP 367
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 31.9 bits (69), Expect = 1.0
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPP 595
PP PPP P PP P PPP PPP
Sbjct: 324 PPPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPPP 369
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.5 bits (68), Expect = 1.3
Identities = 28/112 (25%), Positives = 30/112 (26%)
Frame = -1
Query: 801 GXPPPXXXXXXXXXXXXXXXXXXPPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPX 622
G PPP PP PP P P G PPP
Sbjct: 41 GTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPP 100
Query: 621 XGXXXXPPPXXXXXFFXFXAXVXXPKIXPXXPPGXGFFFXGKXXPPPPPXGK 466
G PPP + P P G G PPPPP G+
Sbjct: 101 KGTGTPPPPPTGEPQ-DLSGEGNASRRPPPPPKGTG-------SPPPPPTGE 144
Score = 31.5 bits (68), Expect = 1.3
Identities = 28/112 (25%), Positives = 29/112 (25%)
Frame = -1
Query: 801 GXPPPXXXXXXXXXXXXXXXXXXPPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPX 622
G PPP PP PP P P G P PPP
Sbjct: 104 GTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPK 163
Query: 621 XGXXXXPPPXXXXXFFXFXAXVXXPKIXPXXPPGXGFFFXGKXXPPPPPXGK 466
PPP P PP G PPPPP G+
Sbjct: 164 GTGSPPPPPTGEPQDLSTEGNASR---RPPPPP------KGTGTPPPPPTGE 206
Score = 31.1 bits (67), Expect = 1.8
Identities = 28/112 (25%), Positives = 30/112 (26%)
Frame = -1
Query: 801 GXPPPXXXXXXXXXXXXXXXXXXPPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPX 622
G PPP PP PP P P G P PPP
Sbjct: 166 GSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPK 225
Query: 621 XGXXXXPPPXXXXXFFXFXAXVXXPKIXPXXPPGXGFFFXGKXXPPPPPXGK 466
PPP + P P G G PPPPP G+
Sbjct: 226 GTGSPTPPPTGEPQ--DLSGEGNASRRPPPPPKGTG-------SPPPPPTGE 268
Score = 30.3 bits (65), Expect = 3.1
Identities = 25/89 (28%), Positives = 26/89 (29%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVX 553
PP PP P P G P PPP PPP A
Sbjct: 33 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQ--DLSAEEG 90
Query: 552 XPKIXPXXPPGXGFFFXGKXXPPPPPXGK 466
P PP G PPPPP G+
Sbjct: 91 NASRRPPPPP------KGTGTPPPPPTGE 113
Score = 29.5 bits (63), Expect = 5.4
Identities = 27/110 (24%), Positives = 29/110 (26%)
Frame = -1
Query: 795 PPPXXXXXXXXXXXXXXXXXXPPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXG 616
PPP PP PP P P G P PPP
Sbjct: 75 PPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGT 134
Query: 615 XXXXPPPXXXXXFFXFXAXVXXPKIXPXXPPGXGFFFXGKXXPPPPPXGK 466
PPP + P P G G PPPPP G+
Sbjct: 135 GSPPPPPTGEPQ--DLSGEGNASRRPPPPPKGTG-------SPPPPPTGE 175
Score = 29.1 bits (62), Expect = 7.2
Identities = 30/118 (25%), Positives = 31/118 (26%)
Frame = -1
Query: 801 GXPPPXXXXXXXXXXXXXXXXXXPPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPX 622
G PPP PP PP P P G P PPP
Sbjct: 135 GSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRP-PPPP 193
Query: 621 XGXXXXPPPXXXXXFFXFXAXVXXPKIXPXXPPGXGFFFXGKXXPPPPPXGKKKXXPP 448
G PPP P P G+ PPPPP G PP
Sbjct: 194 KGTGTPPPP---------------PTGEPQDLSAEGY---ASRRPPPPPKGTGSPTPP 233
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 3.1
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -1
Query: 657 PPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVXXPKIXPXXPPGXGFFFXGKXXPPPP 478
PP P PPP PPP A P P PP F PPPP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPPTMS-KAPTGVPLPVPPPPP---LFSPSMILPPPP 1393
Query: 477 P 475
P
Sbjct: 1394 P 1394
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 4.1
Identities = 24/86 (27%), Positives = 25/86 (29%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVX 553
PP PPP P P G P P PPP +
Sbjct: 574 PPPPPPSSGTRGIAPSRPL----PQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAA 629
Query: 552 XPKIXPXXPPGXGFFFXGKXXPPPPP 475
P P PP G G PPPPP
Sbjct: 630 PPP--PPPPPPMGLPAVGAGAPPPPP 653
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 4.1
Identities = 24/86 (27%), Positives = 25/86 (29%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVX 553
PP PPP P P G P P PPP +
Sbjct: 400 PPPPPPSSGTRGIAPSRPL----PQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAA 455
Query: 552 XPKIXPXXPPGXGFFFXGKXXPPPPP 475
P P PP G G PPPPP
Sbjct: 456 PPP--PPPPPPMGLPAVGAGAPPPPP 479
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 9.5
Identities = 28/95 (29%), Positives = 28/95 (29%)
Frame = -1
Query: 732 PPXPPPXXXFXPFXPXGXXFFFXXXPPFXGXPFPPPXXGXXXXPPPXXXXXFFXFXAXVX 553
PP PPP P PP P PPP PPP V
Sbjct: 508 PPTPPPPA---PGPHKEQRRSTSKDPP---RPAPPPVSSIP--PPPPIAGLLAANGTNVP 559
Query: 552 XPKIXPXXPPGXGFFFXGKXXPPPPPXGKKKXXPP 448
P P PP G PPPPP PP
Sbjct: 560 IP---PPPPPPLPQNLSGAPPPPPPPPPMLGGPPP 591
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.148 0.478
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,126,065
Number of Sequences: 27780
Number of extensions: 319759
Number of successful extensions: 900
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3620756926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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