Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_B03
         (1247 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0887 + 20557974-20558186,20558265-20558456,20558548-20558706     70   4e-12
01_06_0006 - 25517892-25517935,25518156-25518276,25518598-255187...    31   2.5  
04_03_0217 - 12769956-12770252,12770340-12770490,12770572-127708...    29   5.8  
10_08_0259 + 16274430-16274747,16275180-16275242,16275329-162754...    29   7.6  

>04_03_0887 + 20557974-20558186,20558265-20558456,20558548-20558706
          Length = 187

 Score = 69.7 bits (163), Expect = 4e-12
 Identities = 39/105 (37%), Positives = 56/105 (53%)
 Frame = +2

Query: 410 SAKEKLKKAVKEYGSTVIVFHVTISLISLGSCYLLVSSGVDLVAILKYLNIEEGTVLKAA 589
           S  E+ K+ + +YG   +   +T+SLIS   CYLLVS+GVD+  +L  + I  G      
Sbjct: 88  SRTEQAKELLAKYGGAYLATSITLSLISFTLCYLLVSAGVDVQDLLGKVGIATG----ET 143

Query: 590 GSNAGTFVIAYTVHKIFAPFRIAITLTATPFIVRHLRNIGILKRG 724
           G   GTF +AY  HK  +P R   T+  TP +      IG +K+G
Sbjct: 144 GGKVGTFALAYAAHKAASPIRFPPTVALTPVVASW---IGRIKKG 185


>01_06_0006 -
           25517892-25517935,25518156-25518276,25518598-25518733,
           25519189-25519280,25519358-25519426,25519710-25519821,
           25519897-25520015,25520302-25520355,25520811-25520891,
           25520968-25521051,25521124-25521315,25521633-25521746,
           25521832-25521978,25522066-25522302,25522762-25522810,
           25522894-25523027,25523124-25523324,25523532-25523701,
           25523773-25523875,25524198-25524361,25525015-25525055,
           25525144-25525187
          Length = 835

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 21/65 (32%), Positives = 34/65 (52%)
 Frame = +2

Query: 488 ISLGSCYLLVSSGVDLVAILKYLNIEEGTVLKAAGSNAGTFVIAYTVHKIFAPFRIAITL 667
           +S GS ++L SS + ++ IL   N       K + + +G FVIA T H I  PF +   +
Sbjct: 143 LSEGSGFVLFSSELAVIKILSNGNTVNLGGEKVSINRSGAFVIAATGHHIKHPFLLPSEI 202

Query: 668 TATPF 682
            ++ F
Sbjct: 203 FSSLF 207


>04_03_0217 -
           12769956-12770252,12770340-12770490,12770572-12770803,
           12770979-12771040,12771189-12771235,12771313-12771431,
           12771513-12771671,12771745-12771925,12772010-12772361,
           12772673-12772717,12772789-12772854,12772951-12773016,
           12773107-12773178,12773283-12773357,12773437-12773508,
           12774169-12774240,12774499-12774570,12776252-12776323,
           12776400-12776471,12776811-12776997,12778343-12778457
          Length = 861

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 583 GCWFKCWDFCYSLYSPQNFRSIPDSHNFDCNTFHRSTLKKY 705
           G +F+  D    +YS QNF ++ DS  F+      S+L+ Y
Sbjct: 367 GHYFRATDAKNIIYSSQNFNNVVDSKLFETGRVSPSSLRYY 407


>10_08_0259 +
           16274430-16274747,16275180-16275242,16275329-16275424,
           16275526-16275618,16276415-16276605,16276684-16276921,
           16277805-16277900,16278324-16278404,16278532-16278939,
           16279048-16279331,16279460-16279547,16279630-16279830,
           16280032-16280118,16280119-16280238,16280536-16280708,
           16281914-16282055,16282292-16282414,16282601-16282656,
           16282735-16283038,16283154-16283283,16283491-16283549,
           16283829-16284061,16285480-16285527,16285765-16285843,
           16285925-16286169,16286338-16286722
          Length = 1446

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 8/26 (30%), Positives = 19/26 (73%)
 Frame = -2

Query: 172 TIIFVNIWVNLYCYINFRHVMLFFIS 95
           T++ +++ + LYCY   +++M+F +S
Sbjct: 725 TLVMISVQLYLYCYRKLKYIMIFQVS 750


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,268,369
Number of Sequences: 37544
Number of extensions: 538476
Number of successful extensions: 1020
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3852724812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)