Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_B03
         (1247 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132860-20|CAB60503.2|  263|Caenorhabditis elegans Hypothetical...    50   3e-06
U64849-7|AAC48048.1|  307|Caenorhabditis elegans Hypothetical pr...    31   2.2  
Z92786-4|CAB07206.1|  553|Caenorhabditis elegans Hypothetical pr...    30   3.9  
Z92786-2|CAB07211.1|  518|Caenorhabditis elegans Hypothetical pr...    29   6.9  
U28928-11|AAA68342.3|  824|Caenorhabditis elegans Hypothetical p...    29   6.9  
Z92803-9|CAC35822.1|  248|Caenorhabditis elegans Hypothetical pr...    29   9.1  

>AL132860-20|CAB60503.2|  263|Caenorhabditis elegans Hypothetical
           protein Y56A3A.22 protein.
          Length = 263

 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
 Frame = +2

Query: 422 KLKKAVKEYGSTVIVFHVTISLISLGSCYLLVSSGVDLVAILKYLNIEEGTV--LKAAGS 595
           K+K   K Y    +  H         + YL+V SGVD++++L++L++ +  V  +K    
Sbjct: 83  KVKYYFKRYWYIAVPAHAASCTAWFIALYLVVKSGVDVISLLEWLHMPDAIVEKVKNTPE 142

Query: 596 NAGTFVIAYTVHKIFAPFRIAITLTATPFIVRHLRNIGILK 718
            AG  V++  ++KI  PFR   TL         LR +G LK
Sbjct: 143 TAGVVVVSLILYKIAMPFRYMTTLLLIQATFWTLRRLGKLK 183


>U64849-7|AAC48048.1|  307|Caenorhabditis elegans Hypothetical
           protein K04A8.2 protein.
          Length = 307

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +2

Query: 530 DLVAILKYLNIEEGTVLKAAGSNAGTFVIAYTVHKIFAPFRIAITL 667
           DL  +LK   I +   L   G   GT  I+Y VH+I+ P R+A+ +
Sbjct: 220 DLREMLKIKCILKKGGLLFLGVPIGTDAISYNVHRIYGPVRLALMM 265


>Z92786-4|CAB07206.1|  553|Caenorhabditis elegans Hypothetical
           protein F47H4.7 protein.
          Length = 553

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +1

Query: 613 YSLYSPQNFRSIPDSHNFDCNTFHRSTLKKYWNFKTWYK 729
           Y L+      SI +++   CNT  ++ +K YW+F+ WY+
Sbjct: 199 YILFECLQGNSIFEAYEKLCNTVGKNAVK-YWDFEYWYQ 236


>Z92786-2|CAB07211.1|  518|Caenorhabditis elegans Hypothetical
           protein F47H4.4 protein.
          Length = 518

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 601 WDFCYSLYSPQNFRSIPDSHNFDCNTFHRSTLKKYWNFKTWYK 729
           W + Y   S  N  SI +++   C T  ++ +K YW F+ WY+
Sbjct: 164 WGYIYFECSQSN--SIFEAYEKMCETVGKNAVK-YWEFEYWYQ 203


>U28928-11|AAA68342.3|  824|Caenorhabditis elegans Hypothetical
           protein C44B7.11 protein.
          Length = 824

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
 Frame = +2

Query: 431 KAVKEYGSTVIVFHVT-ISLISLGSCYLLVSSGVDLVAILKYLNIEEGTVLKAAGSNAGT 607
           KA +EYGST+ + H+T IS I L   Y  ++SG  L A+L    I+       A     T
Sbjct: 414 KAREEYGSTLELIHLTLISGILLAFTYYDIASGF-LFALLLVPAIKSIITYFGAWPTCPT 472

Query: 608 FVIAYTVHKIFAPFRIAITLT 670
           F    T+   F    +AI  T
Sbjct: 473 FNTILTLILSFPGCAMAIYTT 493


>Z92803-9|CAC35822.1|  248|Caenorhabditis elegans Hypothetical
           protein K01G5.10 protein.
          Length = 248

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +3

Query: 96  LIKNNMTCLK-LI*QYKLTHMLTNMIVEGXLAYLRPCRATFQVLSQETILISTCQ-AHNG 269
           +I N  + LK L+ Q+ L  + +  ++ G + Y +P    FQ++     LIS  +  H G
Sbjct: 146 VISNFDSRLKSLLSQFNLLDLFSMTVLSGEIGYEKPDEKIFQLVVNHFDLISPSEILHIG 205

Query: 270 DKATNTY 290
           D   N +
Sbjct: 206 DNLKNDF 212


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,390,013
Number of Sequences: 27780
Number of extensions: 478094
Number of successful extensions: 1137
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3464240056
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)