Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_B03
(1247 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 25 1.8
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 25 1.8
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 25 1.8
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 25 1.8
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 24 3.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 4.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 4.2
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 5.5
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 23 7.3
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 22 9.7
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 1.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 673 NTFHRSTLKKYWNFKTWYKCWWWEINYIHK 762
NT H + K +N + K ++ INYI +
Sbjct: 88 NTIHNNNYKYNYNNNNYNKKLYYNINYIEQ 117
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 1.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 673 NTFHRSTLKKYWNFKTWYKCWWWEINYIHK 762
NT H + K +N + K ++ INYI +
Sbjct: 88 NTIHNNNYKYNYNNNNYNKKLYYNINYIEQ 117
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 1.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 673 NTFHRSTLKKYWNFKTWYKCWWWEINYIHK 762
NT H + K +N + K ++ INYI +
Sbjct: 88 NTIHNNNYKYNYNNNNYNKKLYYNINYIEQ 117
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 1.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 673 NTFHRSTLKKYWNFKTWYKCWWWEINYIHK 762
NT H + K +N + K ++ INYI +
Sbjct: 88 NTIHNNNYKYNYNNNNYNKKLYYNINYIEQ 117
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 23.8 bits (49), Expect = 3.2
Identities = 15/63 (23%), Positives = 23/63 (36%)
Frame = +1
Query: 172 SRGC*PIFVHAEQRSKSFHRKPYSSQHARLTMGTRPQILIRSSSQCTLFESKK*IQRKNY 351
S C P H + + F PY + R+ G+ + S + +F KK Y
Sbjct: 156 SVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGS----WVHSGEEVNIFLDKKGFHMDGY 211
Query: 352 K*N 360
N
Sbjct: 212 TNN 214
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 4.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 256 WHVEMSMVSCERTWNVALH 200
W VE + VS ER +VALH
Sbjct: 712 WIVEPTDVSVERNKHVALH 730
Score = 23.0 bits (47), Expect = 5.5
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1
Query: 596 LNQQPSRQFPLLYLNILE*PLNQLH*KQASSNCLMK 489
L+ P P+LY I P+N+ H S++ M+
Sbjct: 1519 LHVWPDNGCPILYFTIQYRPINEFHWTLVSNSVKMQ 1554
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 4.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 256 WHVEMSMVSCERTWNVALH 200
W VE + VS ER +VALH
Sbjct: 708 WIVEPTDVSVERNKHVALH 726
Score = 23.0 bits (47), Expect = 5.5
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1
Query: 596 LNQQPSRQFPLLYLNILE*PLNQLH*KQASSNCLMK 489
L+ P P+LY I P+N+ H S++ M+
Sbjct: 1515 LHVWPDNGCPILYFTIQYRPINEFHWTLVSNSVKMQ 1550
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.0 bits (47), Expect = 5.5
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 419 EKLKKAVKEYGSTVIVFHVTI 481
+K++ K+ +TV+ FHVT+
Sbjct: 49 DKMRPPKKDGQATVVYFHVTV 69
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 22.6 bits (46), Expect = 7.3
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 114 TCL-KLI*QYKLTHMLTNMIVEGXLAYLRPCRATFQVLSQETILISTCQAHNGDKATNTY 290
TC+ KL+ +K + +MIV+ + P V+ +E + + + + GD TY
Sbjct: 70 TCIMKLLRTFKNGNFDFDMIVKQLEITMPPEEV---VIGKEIVAVCRNEEYTGDDCQKTY 126
Query: 291 QII 299
Q +
Sbjct: 127 QYV 129
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 22.2 bits (45), Expect = 9.7
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 854 DPINPHXREIPGPG 813
D ++PH R P PG
Sbjct: 40 DLVHPHWRAFPAPG 53
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 290,644
Number of Sequences: 438
Number of extensions: 7170
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42622365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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