Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_B02
(1269 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q01081 Cluster: Splicing factor U2AF 35 kDa subunit; n=... 198 2e-49
UniRef50_UPI00015561CF Cluster: PREDICTED: similar to U2 auxilia... 126 1e-27
UniRef50_A6NKI8 Cluster: Uncharacterized protein U2AF1L4; n=4; H... 124 6e-27
UniRef50_A7PPK3 Cluster: Chromosome chr8 scaffold_23, whole geno... 122 1e-26
UniRef50_Q99L29 Cluster: CDNA sequence BC003883; n=18; Eukaryota... 119 1e-25
UniRef50_Q945S0 Cluster: U2 auxiliary factor small subunit; n=3;... 116 1e-24
UniRef50_A5K4K6 Cluster: U2 snRNP auxiliary factor, small subuni... 111 5e-23
UniRef50_Q6C2P0 Cluster: Similar to sp|Q09176 Schizosaccharomyce... 110 9e-23
UniRef50_A6R4A5 Cluster: Splicing factor U2AF 35 kDa subunit; n=... 108 3e-22
UniRef50_Q6BZ93 Cluster: Similar to sp|Q09176 Schizosaccharomyce... 99 3e-19
UniRef50_UPI00006CFDB6 Cluster: zinc finger protein; n=1; Tetrah... 97 9e-19
UniRef50_A0BQR7 Cluster: Chromosome undetermined scaffold_121, w... 94 6e-18
UniRef50_A5DWP1 Cluster: Putative uncharacterized protein; n=1; ... 91 4e-17
UniRef50_A3GG10 Cluster: Splicing factor U2AF 23 kDa subunit; n=... 90 1e-16
UniRef50_UPI0000498385 Cluster: U2 auxiliary factor; n=1; Entamo... 88 4e-16
UniRef50_A2EGN8 Cluster: Putative uncharacterized protein; n=1; ... 85 4e-15
UniRef50_Q59LX5 Cluster: Potential spliceosomal U2AF small subun... 82 3e-14
UniRef50_Q75BC2 Cluster: ADL355Wp; n=1; Eremothecium gossypii|Re... 82 3e-14
UniRef50_UPI000049A22E Cluster: U2 snRNP auxiliary factor small ... 78 4e-13
UniRef50_Q59MA7 Cluster: Potential spliceosomal U2AF small subun... 77 7e-13
UniRef50_A7TR25 Cluster: Putative uncharacterized protein; n=1; ... 71 8e-11
UniRef50_Q8SQL5 Cluster: U2 snRNP AUXILIARY FACTOR SMALL SUBUNIT... 68 6e-10
UniRef50_Q9N6L5 Cluster: U2 splicing auxiliary factor, putative;... 67 8e-10
UniRef50_Q15696 Cluster: U2 small nuclear ribonucleoprotein auxi... 66 1e-09
UniRef50_UPI000049A28E Cluster: U2 snRNP auxiliary factor; n=1; ... 65 3e-09
UniRef50_A2FE85 Cluster: Putative uncharacterized protein; n=2; ... 62 3e-08
UniRef50_O13845 Cluster: RNA-binding protein rsd1; n=1; Schizosa... 56 1e-06
UniRef50_A7SAD7 Cluster: Predicted protein; n=1; Nematostella ve... 56 2e-06
UniRef50_A4PSD8 Cluster: Concanavalin A-like lectin/glucanase; U... 54 6e-06
UniRef50_UPI0000E47A69 Cluster: PREDICTED: similar to U2af1-rs2;... 54 8e-06
UniRef50_UPI00015B41F8 Cluster: PREDICTED: hypothetical protein;... 54 1e-05
UniRef50_UPI0000D57884 Cluster: PREDICTED: similar to U2 small n... 53 1e-05
UniRef50_Q1RLC5 Cluster: Zinc finger protein; n=1; Ciona intesti... 52 4e-05
UniRef50_UPI00003C039B Cluster: PREDICTED: similar to U2 small n... 51 6e-05
UniRef50_Q7PL83 Cluster: CG17540-PA, isoform A; n=7; Endopterygo... 49 3e-04
UniRef50_UPI0000D563A7 Cluster: PREDICTED: similar to CG17540-PA... 48 5e-04
UniRef50_O43719 Cluster: HIV Tat-specific factor 1; n=30; Eutele... 48 7e-04
UniRef50_UPI000065E4EC Cluster: HIV Tat-specific factor 1 (Tat-S... 46 0.002
UniRef50_Q5EAL1 Cluster: Htatsf1-prov protein; n=4; Tetrapoda|Re... 46 0.002
UniRef50_Q7PVF2 Cluster: ENSANGP00000010643; n=2; Culicidae|Rep:... 46 0.003
UniRef50_A7SAD9 Cluster: Predicted protein; n=2; Nematostella ve... 46 0.003
UniRef50_Q4PI99 Cluster: Putative uncharacterized protein; n=1; ... 46 0.003
UniRef50_Q4MZ00 Cluster: Splicing factor, putative; n=2; Theiler... 44 0.006
UniRef50_Q9Y7A8 Cluster: Pad-1; n=18; Pezizomycotina|Rep: Pad-1 ... 44 0.006
UniRef50_Q5KGC9 Cluster: Putative uncharacterized protein; n=1; ... 43 0.019
UniRef50_UPI0000E4A87D Cluster: PREDICTED: similar to RNA-bindin... 42 0.026
UniRef50_Q01ID4 Cluster: OSIGBa0092E01.1 protein; n=7; Magnoliop... 42 0.026
UniRef50_Q5CSH1 Cluster: Ro ribonucleoprotein-binding protein 1,... 42 0.026
UniRef50_Q96I25 Cluster: Splicing factor 45; n=39; Euteleostomi|... 42 0.045
UniRef50_UPI0000E45F1C Cluster: PREDICTED: hypothetical protein;... 41 0.059
UniRef50_A7S8H1 Cluster: Predicted protein; n=2; Nematostella ve... 41 0.078
UniRef50_A7TMQ4 Cluster: Putative uncharacterized protein; n=1; ... 41 0.078
UniRef50_A4PSD9 Cluster: U2 auxiliary factor small subunit; n=1;... 40 0.10
UniRef50_A4S1N4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 40 0.18
UniRef50_A7AMD5 Cluster: Splicing factor, CC1-like family protei... 40 0.18
UniRef50_Q8IE99 Cluster: Splicing factor, putative; n=1; Plasmod... 39 0.24
UniRef50_Q4U9D6 Cluster: RNA binding protein, putative; n=2; The... 39 0.32
UniRef50_A2QMQ0 Cluster: Contig An07c0080, complete genome; n=11... 39 0.32
UniRef50_A7R5K6 Cluster: Chromosome undetermined scaffold_993, w... 38 0.42
UniRef50_A2EKZ8 Cluster: Putative uncharacterized protein; n=2; ... 38 0.42
UniRef50_Q3UZ51 Cluster: Adult male thymus cDNA, RIKEN full-leng... 38 0.55
UniRef50_Q5C0M1 Cluster: SJCHGC01849 protein; n=2; Schistosoma j... 38 0.55
UniRef50_A4RFH0 Cluster: Putative uncharacterized protein; n=4; ... 38 0.55
UniRef50_Q14498 Cluster: RNA-binding protein 39; n=55; Euteleost... 38 0.55
UniRef50_P42698 Cluster: DNA-damage-repair/toleration protein DR... 38 0.55
UniRef50_A7SRZ1 Cluster: Predicted protein; n=1; Nematostella ve... 38 0.73
UniRef50_Q9U2F5 Cluster: Putative uncharacterized protein; n=2; ... 37 0.97
UniRef50_Q8TAS1 Cluster: Serine/threonine-protein kinase Kist; n... 37 0.97
UniRef50_Q9SY74 Cluster: F14N23.20; n=3; Arabidopsis thaliana|Re... 37 1.3
UniRef50_Q5CIH5 Cluster: Splicing factor; n=2; Cryptosporidium|R... 37 1.3
UniRef50_Q4UI15 Cluster: RNA binding protein, putative; n=3; Pir... 37 1.3
UniRef50_A2FG00 Cluster: Putative uncharacterized protein; n=1; ... 37 1.3
UniRef50_UPI0000587D6B Cluster: PREDICTED: similar to 2410104I19... 36 1.7
UniRef50_Q8T8Y4 Cluster: AT16577p; n=3; Sophophora|Rep: AT16577p... 36 1.7
UniRef50_Q1RPX5 Cluster: Zinc finger protein; n=1; Ciona intesti... 36 2.9
UniRef50_A0DYF5 Cluster: Chromosome undetermined scaffold_7, who... 36 2.9
UniRef50_Q13434 Cluster: Makorin-4; n=58; Euteleostomi|Rep: Mako... 36 2.9
UniRef50_Q4TA11 Cluster: Chromosome undetermined SCAF7478, whole... 35 3.9
UniRef50_A5K320 Cluster: Splicing factor, putative; n=5; Plasmod... 35 3.9
UniRef50_UPI00006CB36A Cluster: RNA binding motif protein; n=1; ... 35 5.1
UniRef50_Q9ZVW9 Cluster: Putative splicing factor; n=3; Arabidop... 35 5.1
UniRef50_Q7Q0R8 Cluster: ENSANGP00000012185; n=1; Anopheles gamb... 35 5.1
UniRef50_Q5KF11 Cluster: Splicing factor u2af-associated protein... 35 5.1
UniRef50_UPI00004991C4 Cluster: RNA-binding protein; n=1; Entamo... 34 6.8
UniRef50_A7P8E1 Cluster: Chromosome chr3 scaffold_8, whole genom... 34 6.8
UniRef50_Q57ZE9 Cluster: Putative uncharacterized protein; n=1; ... 34 6.8
UniRef50_A4QVU3 Cluster: Putative uncharacterized protein; n=1; ... 34 6.8
UniRef50_Q54QQ7 Cluster: Putative RNA splicing factor; n=1; Dict... 34 9.0
UniRef50_Q9UHX1 Cluster: Poly(U)-binding-splicing factor PUF60 (... 34 9.0
>UniRef50_Q01081 Cluster: Splicing factor U2AF 35 kDa subunit; n=78;
Eukaryota|Rep: Splicing factor U2AF 35 kDa subunit -
Homo sapiens (Human)
Length = 240
Score = 198 bits (484), Expect = 2e-49
Identities = 100/172 (58%), Positives = 111/172 (64%)
Frame = +3
Query: 342 SQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEM 521
SQT+ L N+Y NPQN ++SADG V SD MQEHYD F E+V E E+KYGE+ EM
Sbjct: 43 SQTIALLNIYRNPQNSSQSADGLRCAV---SDVEMQEHYDEFFEEVFTEMEEKYGEVEEM 99
Query: 522 NVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQYE 701
NV DNLGDH GNV +KFRREEDA AV DLNNRWF G+P++AELSPVTD RE CCRQYE
Sbjct: 100 NVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYE 159
Query: 702 MGECTXSGCGYFMXLKPIS*XLXXYXXXXXXXXXXXXXXXXXRRXRXRSRER 857
MGECT G FM LKPIS L RR R R R R
Sbjct: 160 MGECTRGGFCNFMHLKPISRELRRELYGRRRKKHRSRSRSRERRSRSRDRGR 211
Score = 81.0 bits (191), Expect = 6e-14
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = +2
Query: 218 AEYLAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKPTF 340
AEYLA+I GTEKD V CS YF IGACRHGDRCSR+HNKPTF
Sbjct: 2 AEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTF 42
>UniRef50_UPI00015561CF Cluster: PREDICTED: similar to U2 auxiliary
factor 26, partial; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to U2 auxiliary factor 26, partial -
Ornithorhynchus anatinus
Length = 303
Score = 126 bits (304), Expect = 1e-27
Identities = 56/78 (71%), Positives = 63/78 (80%)
Frame = +3
Query: 474 DVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAE 653
+V E ++KYGEI EMNV DNLGDH GNV +KFRREEDA AV++LNNRWF G+ V AE
Sbjct: 1 EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVSELNNRWFNGQAVQAE 60
Query: 654 LSPVTDSREXCCRQYEMG 707
LSPVTD RE CCRQYEMG
Sbjct: 61 LSPVTDFRESCCRQYEMG 78
>UniRef50_A6NKI8 Cluster: Uncharacterized protein U2AF1L4; n=4;
Homo/Pan/Gorilla group|Rep: Uncharacterized protein
U2AF1L4 - Homo sapiens (Human)
Length = 223
Score = 124 bits (298), Expect = 6e-27
Identities = 54/81 (66%), Positives = 63/81 (77%)
Frame = +3
Query: 465 FCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPV 644
F ++V E ++KYGEI EMNV DNLGDH GNV +KFRREED AV +L+NRWF G+ V
Sbjct: 42 FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELSNRWFNGQAV 101
Query: 645 YAELSPVTDSREXCCRQYEMG 707
+ ELSPVTD RE CCRQYEMG
Sbjct: 102 HGELSPVTDFRESCCRQYEMG 122
Score = 81.0 bits (191), Expect = 6e-14
Identities = 34/47 (72%), Positives = 37/47 (78%)
Frame = +2
Query: 218 AEYLAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKPTFVSDCIT 358
AEYLA+I GTEKD V CS YF IG CRHGDRCSR+HNKPTF + T
Sbjct: 2 AEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFSQEVFT 48
>UniRef50_A7PPK3 Cluster: Chromosome chr8 scaffold_23, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr8 scaffold_23, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 317
Score = 122 bits (295), Expect = 1e-26
Identities = 62/144 (43%), Positives = 81/144 (56%)
Frame = +3
Query: 327 TSQPLSQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYG 506
T +S T+LL N+Y P D + +QEH+++F ED+ E KYG
Sbjct: 38 TKPSISPTLLLSNMYQRPDMVTPGVDPQG---QPLDPRKIQEHFEDFYEDLFEELS-KYG 93
Query: 507 EIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXC 686
EI +N+ DNL DH GNV ++FR EE A A+ +LN R++ GRP+ + SPVTD RE
Sbjct: 94 EIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREAT 153
Query: 687 CRQYEMGECTXSGCGYFMXLKPIS 758
CRQYE C G FM LK IS
Sbjct: 154 CRQYEENICNRGGYCNFMHLKKIS 177
Score = 70.5 bits (165), Expect = 8e-11
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +2
Query: 218 AEYLAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKPT 337
AE+LA+I GTEKD V C YF IGACRHGDRCSR+H KP+
Sbjct: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPS 41
>UniRef50_Q99L29 Cluster: CDNA sequence BC003883; n=18;
Eukaryota|Rep: CDNA sequence BC003883 - Mus musculus
(Mouse)
Length = 310
Score = 119 bits (287), Expect = 1e-25
Identities = 60/144 (41%), Positives = 81/144 (56%)
Frame = +3
Query: 327 TSQPLSQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYG 506
T +S T+LL N+Y P D + +Q+H+++F ED+ E KYG
Sbjct: 38 TKPSISPTLLLANMYQRPDMITPGVDPQG---QPLDPRKIQQHFEDFYEDLFEELS-KYG 93
Query: 507 EIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXC 686
EI +N+ DNL DH GNV ++FR EE A A+ +L+ R++ GRP+ + SPVTD RE
Sbjct: 94 EIESLNICDNLADHMVGNVYVQFREEEHAGEALRNLSGRFYAGRPIIVDFSPVTDFREAT 153
Query: 687 CRQYEMGECTXSGCGYFMXLKPIS 758
CRQYE C G FM LK IS
Sbjct: 154 CRQYEENVCNRGGYCNFMHLKKIS 177
Score = 70.5 bits (165), Expect = 8e-11
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +2
Query: 218 AEYLAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKPT 337
AE+LA+I GTEKD V C YF IGACRHGDRCSR+H KP+
Sbjct: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPS 41
>UniRef50_Q945S0 Cluster: U2 auxiliary factor small subunit; n=3;
Eukaryota|Rep: U2 auxiliary factor small subunit -
Arabidopsis thaliana (Mouse-ear cress)
Length = 283
Score = 116 bits (280), Expect = 1e-24
Identities = 66/180 (36%), Positives = 89/180 (49%), Gaps = 5/180 (2%)
Frame = +3
Query: 339 LSQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXE 518
+S T+LL N+Y P D + +Q+H+++F ED+ E +K+GE+
Sbjct: 42 ISPTLLLSNMYQRPDMITPGVDPQG---QPLDPSKIQDHFEDFYEDIFEEL-NKFGEVES 97
Query: 519 MNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQY 698
+NV NL DH GNV + F+ E+ A A+ L R++ GRP+ A+ SPVTD RE CRQY
Sbjct: 98 LNVCVNLADHMIGNVYVLFKEEDHAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQY 157
Query: 699 EMGECTXSGCGYFMXLKPIS*XL-----XXYXXXXXXXXXXXXXXXXXRRXRXRSRERXR 863
E C GC FM +K IS L Y RR R SRER R
Sbjct: 158 EENSCNRGGCCNFMHVKQISRELRRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERER 217
Score = 73.3 bits (172), Expect = 1e-11
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = +2
Query: 218 AEYLAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKPT 337
AE+LA+I GTEKD V C YF IGACRHGDRCSR+HN+PT
Sbjct: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPT 41
>UniRef50_A5K4K6 Cluster: U2 snRNP auxiliary factor, small subunit,
putative; n=11; Eukaryota|Rep: U2 snRNP auxiliary
factor, small subunit, putative - Plasmodium vivax
Length = 316
Score = 111 bits (266), Expect = 5e-23
Identities = 57/138 (41%), Positives = 85/138 (61%)
Frame = +3
Query: 342 SQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEM 521
+QT++++++Y NP A+G +V V D+ +H++ F E+V E KYGEI +M
Sbjct: 43 AQTLVIRHMYDNPPMAVAIAEGQ-MVEDEVLDKAA-DHFEEFYEEVFEELM-KYGEIEDM 99
Query: 522 NVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQYE 701
V DN+GDH GNV IK+ E+ A AV +LN R++ G+P+ E +PVTD RE CRQ+
Sbjct: 100 VVCDNIGDHIIGNVYIKYTHEDYAEKAVKELNGRFYAGKPLQIEYTPVTDFREARCRQFV 159
Query: 702 MGECTXSGCGYFMXLKPI 755
G+C G FM +K +
Sbjct: 160 DGQCRRGGYCNFMHIKHV 177
Score = 60.1 bits (139), Expect = 1e-07
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +2
Query: 218 AEYLAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKP 334
AE+LA I GTE+D V C ++ IGACRHGD+CSR H KP
Sbjct: 2 AEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRSHYKP 40
>UniRef50_Q6C2P0 Cluster: Similar to sp|Q09176 Schizosaccharomyces
pombe Splicing factor U2AF 23 kDa subunit; n=2;
Dikarya|Rep: Similar to sp|Q09176 Schizosaccharomyces
pombe Splicing factor U2AF 23 kDa subunit - Yarrowia
lipolytica (Candida lipolytica)
Length = 203
Score = 110 bits (264), Expect = 9e-23
Identities = 58/139 (41%), Positives = 77/139 (55%), Gaps = 3/139 (2%)
Frame = +3
Query: 342 SQTVLLQNLYVNPQNXAK---SADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEI 512
S TVL NLY NP N + DGS + A+ + +H+ F ED+ +E K G +
Sbjct: 43 SNTVLCSNLYQNPANGESDPLNEDGSKMTKAD-----LDKHFALFYEDIYMEAA-KLGRL 96
Query: 513 XEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCR 692
EM V +N DH GN ++FR +EDA A + N RW+ GRPV+ ELSPV D E CCR
Sbjct: 97 EEMIVCENGNDHLTGNTYLRFRNQEDAQRACDLFNTRWYAGRPVWCELSPVNDFTESCCR 156
Query: 693 QYEMGECTXSGCGYFMXLK 749
Q++ EC+ FM K
Sbjct: 157 QHDTNECSRGNMCNFMHAK 175
Score = 65.3 bits (152), Expect = 3e-09
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = +2
Query: 218 AEYLAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKPTFVSDCITTKL 367
A +LA+I GTE D V CS Y+ IGACRHG++CSR H KPT+ + + + L
Sbjct: 2 ASHLASIYGTENDKVNCSFYYKIGACRHGEKCSRKHVKPTYSNTVLCSNL 51
>UniRef50_A6R4A5 Cluster: Splicing factor U2AF 35 kDa subunit; n=13;
Pezizomycotina|Rep: Splicing factor U2AF 35 kDa subunit
- Ajellomyces capsulatus NAm1
Length = 270
Score = 108 bits (259), Expect = 3e-22
Identities = 58/138 (42%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Frame = +3
Query: 342 SQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEM 521
SQT+LL NLY NP K+ ++ +Q H+D F ED E KYGE+ E+
Sbjct: 104 SQTILLPNLYQNPAYDTKN---------KMNPSQLQNHFDAFYEDFWCEM-CKYGELEEV 153
Query: 522 NVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQYE 701
V DN DH GNV +F+ E+ A A + LN+RW+ RP+Y ELSPVTD RE CCR
Sbjct: 154 VVCDNNNDHLIGNVYARFKYEDSAQQACDALNSRWYAARPIYCELSPVTDFREACCRLNS 213
Query: 702 MGECTXSG-CGYFMXLKP 752
C G C + +P
Sbjct: 214 GEGCVRGGFCNFIHRKEP 231
Score = 69.3 bits (162), Expect = 2e-10
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +2
Query: 212 TXAEYLAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKPTF 340
T A YLA+I GTE+D V CS Y+ IGACRHGDRCSR H KP++
Sbjct: 61 TMANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSY 103
>UniRef50_Q6BZ93 Cluster: Similar to sp|Q09176 Schizosaccharomyces
pombe Splicing factor U2AF 23 kDa subunit; n=1;
Debaryomyces hansenii|Rep: Similar to sp|Q09176
Schizosaccharomyces pombe Splicing factor U2AF 23 kDa
subunit - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 234
Score = 98.7 bits (235), Expect = 3e-19
Identities = 54/138 (39%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Frame = +3
Query: 342 SQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEM 521
S T+LL NLY NP+ DG L + + +QE++D+F +D+ ++ +GE+ M
Sbjct: 35 SDTILLPNLYQNPK--LNKNDGEEL-----NPKQVQEYFDHFYKDIFLKFA-LFGEVYSM 86
Query: 522 NVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQYE 701
V +N +H GNV +KF E+ A AV LN WFGGRPV+ ELSPV + CR YE
Sbjct: 87 VVCENDNNHLNGNVYVKFANEDSAYNAVMLLNQEWFGGRPVHCELSPVESFHDANCRAYE 146
Query: 702 MGECTXSG-CGYFMXLKP 752
C C + KP
Sbjct: 147 SSTCNRGDHCNFMHIHKP 164
Score = 44.4 bits (100), Expect = 0.006
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2
Query: 251 KDXVXCSXYFXIGACRHGDRCSRIHNKPT 337
+D + C+ Y IGACRHG++CSR H KP+
Sbjct: 5 EDRIICTFYTKIGACRHGEKCSRKHVKPS 33
>UniRef50_UPI00006CFDB6 Cluster: zinc finger protein; n=1;
Tetrahymena thermophila SB210|Rep: zinc finger protein -
Tetrahymena thermophila SB210
Length = 389
Score = 97.1 bits (231), Expect = 9e-19
Identities = 49/138 (35%), Positives = 76/138 (55%)
Frame = +3
Query: 342 SQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEM 521
SQT+L++++Y N A G+ V+ + HY+ F E+V +E YGEI ++
Sbjct: 102 SQTILIKHMYQNSPTELALAQGNR--VSEEEAQKALNHYEEFYEEVFLELAS-YGEIDDL 158
Query: 522 NVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQYE 701
+ DN+GDH GNV +K+ RE +A + L R++ + + E SPVTD C+QY
Sbjct: 159 IICDNIGDHMKGNVYVKYVRESEALKCLMSLKTRYYDKQQLQPEFSPVTDFSNAKCKQYI 218
Query: 702 MGECTXSGCGYFMXLKPI 755
G+C SG ++ KPI
Sbjct: 219 EGQCKRSGYCNYIHSKPI 236
Score = 54.8 bits (126), Expect = 4e-06
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = +2
Query: 218 AEYLAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKPT 337
AE L+ + GTE+D V C YF IGACR+ ++C RIHN+P+
Sbjct: 61 AEKLSRMYGTEEDKVNCPFYFKIGACRYENKCLRIHNRPS 100
>UniRef50_A0BQR7 Cluster: Chromosome undetermined scaffold_121,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_121,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 312
Score = 94.3 bits (224), Expect = 6e-18
Identities = 51/141 (36%), Positives = 76/141 (53%)
Frame = +3
Query: 336 PLSQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIX 515
P+SQT+L +++Y N A G+ + A + E E ++NF EDV ++ + +GEI
Sbjct: 41 PISQTILFKHMYQNSPMEVAIASGNAVSQAGI--EEALEKFENFYEDVFLKLAE-FGEIE 97
Query: 516 EMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQ 695
++ V +N+GDH GNV +K+ E A N L N + RP+ E SPV D C+Q
Sbjct: 98 DLIVCENIGDHLVGNVYVKYTSELFAESCFNTLQNLSYENRPLQMEYSPVLDFSSAKCKQ 157
Query: 696 YEMGECTXSGCGYFMXLKPIS 758
Y G C G ++ LK IS
Sbjct: 158 YIDGTCQRGGACNYLHLKKIS 178
Score = 48.0 bits (109), Expect = 5e-04
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +2
Query: 227 LAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKP 334
L + GTE+D V CS Y IGACR+ ++C RIH+ P
Sbjct: 5 LERVYGTEEDKVNCSFYIKIGACRYENKCQRIHSIP 40
>UniRef50_A5DWP1 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 295
Score = 91.5 bits (217), Expect = 4e-17
Identities = 49/136 (36%), Positives = 72/136 (52%)
Frame = +3
Query: 342 SQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEM 521
S+T++L NLY NP+ +D +S +QE D F +DV + K GE+ +
Sbjct: 79 SKTLILANLYQNPKLNKNESD-------ELSQLQLQESLDLFFQDVFIHLSQK-GEVASL 130
Query: 522 NVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQYE 701
V +N +H GNV ++F E+DA A +LN WF GRPV+++LSPV E CR Y+
Sbjct: 131 VVCENENNHLNGNVYVRFYSEKDAQQANQELNQEWFNGRPVHSDLSPVYSFDEARCRAYD 190
Query: 702 MGECTXSGCGYFMXLK 749
C +M L+
Sbjct: 191 TNSCERGEMCNYMHLR 206
Score = 41.5 bits (93), Expect = 0.045
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 260 VXCSXYFXIGACRHGDRCSRIHNKPT 337
+ C Y IGACRHG++CS+ H KPT
Sbjct: 52 ITCQFYNKIGACRHGEKCSKKHIKPT 77
>UniRef50_A3GG10 Cluster: Splicing factor U2AF 23 kDa subunit; n=3;
Pichia|Rep: Splicing factor U2AF 23 kDa subunit - Pichia
stipitis (Yeast)
Length = 184
Score = 89.8 bits (213), Expect = 1e-16
Identities = 51/140 (36%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Frame = +3
Query: 333 QPLSQ-TVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGE 509
+PL+ T+LL NLY NP+ +G L + + +Q+++D F +D+ V+ GE
Sbjct: 37 RPLTSFTILLPNLYQNPK--LNKNEGEEL-----NPKQLQQNFDQFFKDIFVKFAT-LGE 88
Query: 510 IXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCC 689
I E+ V +N +H GNV ++F+ +++A A LN WF RPV+ ELSPV+ E C
Sbjct: 89 IKELVVCENENNHLNGNVYVRFKTKQEAAEATLLLNQEWFNARPVHCELSPVSSFPEANC 148
Query: 690 RQYEMGECTXSGCGYFMXLK 749
R YE CT FM ++
Sbjct: 149 RAYETSLCTRGDHCNFMHVR 168
Score = 41.5 bits (93), Expect = 0.045
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 251 KDXVXCSXYFXIGACRHGDRCSRIHNKP 334
+D + C+ Y IGACRHG++CSR H +P
Sbjct: 11 EDRLPCTFYNKIGACRHGEKCSRKHIRP 38
>UniRef50_UPI0000498385 Cluster: U2 auxiliary factor; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: U2 auxiliary factor -
Entamoeba histolytica HM-1:IMSS
Length = 227
Score = 88.2 bits (209), Expect = 4e-16
Identities = 51/142 (35%), Positives = 80/142 (56%), Gaps = 2/142 (1%)
Frame = +3
Query: 333 QP-LSQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGE 509
QP +S+T+LL +LY NP + + + + +++ ++ F ED+ E K+GE
Sbjct: 39 QPEISRTILLTHLYDNPYIHKEESS-----MTEDEKKKIKKDFNIFYEDIFNELA-KHGE 92
Query: 510 IXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCC 689
I EM V NL +H GNV ++FR E++A A+ L R++ GR + S VTD +E C
Sbjct: 93 IDEMLVCRNLSEHMTGNVYVRFRDEKNASEAMKFLLARYYAGRMIQPSYSHVTDFKEARC 152
Query: 690 RQYEMGECTXSG-CGYFMXLKP 752
+QYE GEC G C + ++P
Sbjct: 153 KQYESGECDRHGFCNFLHVIEP 174
Score = 58.8 bits (136), Expect = 3e-07
Identities = 26/50 (52%), Positives = 33/50 (66%)
Frame = +2
Query: 218 AEYLAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKPTFVSDCITTKL 367
A+ LA+I GTEKD V C+ +F IGACRHGD C+R H +P + T L
Sbjct: 2 AQDLASIHGTEKDKVNCAFFFKIGACRHGDSCTRNHFQPEISRTILLTHL 51
>UniRef50_A2EGN8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 339
Score = 85.0 bits (201), Expect = 4e-15
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Frame = +3
Query: 339 LSQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXE 518
+S T+LL N Y NP + L++ N E ++ ++D F DV E +G I E
Sbjct: 15 VSNTLLLANFYQNPYHFMSLLPPDTLIIEN---ETIRNNFDEFYLDVYEELRT-FGPISE 70
Query: 519 MNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQY 698
V NL +H GNV + + E+A A N+L R++GGRP+ + SPV + CRQ+
Sbjct: 71 FVVSGNLCEHLLGNVLVMYENLENALTAYNNLRGRYYGGRPIDVQFSPVVNFNVAVCRQF 130
Query: 699 EMGECTXS-GCGYFMXLKP 752
+ G+C + C + + P
Sbjct: 131 KEGKCPHNEKCNFIHPIIP 149
>UniRef50_Q59LX5 Cluster: Potential spliceosomal U2AF small subunit;
n=1; Candida albicans|Rep: Potential spliceosomal U2AF
small subunit - Candida albicans (Yeast)
Length = 371
Score = 82.2 bits (194), Expect = 3e-14
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = +3
Query: 447 QEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRW 626
Q+ +D F +D+ V K G+I ++ V +N +H GNV + F EDA A LN W
Sbjct: 208 QKDFDQFFQDIFVHIS-KLGQIRDIAVCENENNHLAGNVYVMFESAEDAYNANLQLNQEW 266
Query: 627 FGGRPVYAELSPVTDSREXCCRQY-EMGECTXSG-CGYFMXLKPIS 758
F G+PVY++LSPV D + CC +Y + +C C Y P S
Sbjct: 267 FNGKPVYSDLSPVNDFNDACCEEYRDYHDCQRGAMCNYMHVRLPSS 312
Score = 41.9 bits (94), Expect = 0.034
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2
Query: 260 VXCSXYFXIGACRHGDRCSRIHNKP 334
V CS Y IGACRHG++CS+ H KP
Sbjct: 20 VLCSFYSKIGACRHGEKCSKKHLKP 44
>UniRef50_Q75BC2 Cluster: ADL355Wp; n=1; Eremothecium gossypii|Rep:
ADL355Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 164
Score = 81.8 bits (193), Expect = 3e-14
Identities = 38/90 (42%), Positives = 56/90 (62%)
Frame = +3
Query: 444 MQEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNR 623
+ E +++F EDV +E ++GE+ E+ V +N DH GNV I++ + A A + L R
Sbjct: 14 LTEDFESFYEDVFLEAA-RFGEVQELIVCENKTDHLNGNVYIRYSTIDAAKAARDALITR 72
Query: 624 WFGGRPVYAELSPVTDSREXCCRQYEMGEC 713
W+G RP+Y +LS VTD RE C+ YE G C
Sbjct: 73 WYGERPLYCDLSHVTDFREAVCKSYEEGTC 102
>UniRef50_UPI000049A22E Cluster: U2 snRNP auxiliary factor small
subunit; n=1; Entamoeba histolytica HM-1:IMSS|Rep: U2
snRNP auxiliary factor small subunit - Entamoeba
histolytica HM-1:IMSS
Length = 279
Score = 78.2 bits (184), Expect = 4e-13
Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Frame = +3
Query: 342 SQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEM 521
SQT+L +Y NP+ + DG L ++ + ++ F EDV E E+ YGEI +
Sbjct: 47 SQTLLFTRMYQNPKK--RIDDGEAL---ERDEKKIMREFNEFYEDVFRELEN-YGEILDF 100
Query: 522 NVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQYE 701
V N DH GNV +K+ EE A A L R++ + + VT+ +E CRQ +
Sbjct: 101 IVCGNDNDHMMGNVYVKYDTEEHAAAAKKALTGRYYAKKILTPNFCRVTEFKEAICRQQQ 160
Query: 702 MGECTXSG-CGYFMXLKP 752
+G CT G C + ++P
Sbjct: 161 IGTCTRGGMCNFIHVIEP 178
Score = 45.2 bits (102), Expect = 0.004
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 206 DITXAEYLAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKPTFVSDCITTKL 367
+ T E I GT++ V C ++ IGACRHGD C++ H KP + T++
Sbjct: 3 ETTKKEETTIINGTKEKPV-CEFFYKIGACRHGDACNKTHIKPESSQTLLFTRM 55
>UniRef50_Q59MA7 Cluster: Potential spliceosomal U2AF small subunit;
n=1; Candida albicans|Rep: Potential spliceosomal U2AF
small subunit - Candida albicans (Yeast)
Length = 377
Score = 77.4 bits (182), Expect = 7e-13
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Frame = +3
Query: 429 VSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVN 608
++DE +Q+ +D F +D+ V K G+I +M V +N +H G+V IKF DA A
Sbjct: 209 LTDEQIQKDFDLFYQDIFVHVA-KLGQINDMAVCEN-ENHLSGHVYIKFNDYNDAIAANL 266
Query: 609 DLNNRWFGGRPVYAELSPVTDSREXCCRQYEMGECTXSG-CGYFMXLKP 752
LN W+ G+PVY+ELSPV + C+ ++ G C C Y +P
Sbjct: 267 QLNQEWYNGKPVYSELSPVNILADAHCKSWDHGHCDRGAKCNYLHVKQP 315
Score = 44.0 bits (99), Expect = 0.008
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +2
Query: 251 KDXVXCSXYFXIGACRHGDRCSRIHNKPTFVSDCITTKL 367
K V CS Y IG+CRHG+ CS+ H KPT + L
Sbjct: 11 KTAVLCSFYTKIGSCRHGEECSKKHLKPTITKTILLPNL 49
>UniRef50_A7TR25 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 190
Score = 70.5 bits (165), Expect = 8e-11
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Frame = +3
Query: 456 YDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGG 635
+D + EDV +E K+G+I + +N DH GNV + A A + LN RW+
Sbjct: 70 FDGYYEDVFIEL-CKFGKIKSFLITENGNDHLRGNVYALYDNVRSAKEARDSLNTRWYNE 128
Query: 636 RPVYAELSPVTDSREXCCRQYEMGECTXSG-CGYFMXLKP 752
+P+Y++L+ + D + CR+Y++G C C + +P
Sbjct: 129 KPLYSDLTHIVDFNDAICRKYDVGSCDRGNECNFMHVRRP 168
Score = 36.7 bits (81), Expect = 1.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 254 DXVXCSXYFXIGACRHGDRCSRIHNKP 334
D C Y+ +G CRHG++CS+ H P
Sbjct: 18 DRERCHFYYKVGVCRHGNKCSKKHIPP 44
>UniRef50_Q8SQL5 Cluster: U2 snRNP AUXILIARY FACTOR SMALL SUBUNIT;
n=1; Encephalitozoon cuniculi|Rep: U2 snRNP AUXILIARY
FACTOR SMALL SUBUNIT - Encephalitozoon cuniculi
Length = 254
Score = 67.7 bits (158), Expect = 6e-10
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Frame = +3
Query: 342 SQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEM 521
S+ V+++ +Y+ P+N +S G +E +Q H D F ED E KYG I ++
Sbjct: 33 SRVVVVKAMYLYPKNDPESTLG---------EESVQIHLDLFYEDWFTELSVKYGAIRKL 83
Query: 522 NVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQYE 701
+ N GN+ I+F EE A ++ R++GG+ + AEL + + C ++E
Sbjct: 84 VIASNSCIQILGNIYIEFHEEEAAMRCAEEIGRRYYGGKRIVAELGNCYRTDDGTCTEHE 143
Query: 702 MGEC-TXSGCGY 734
G C CG+
Sbjct: 144 RGLCGKGEKCGF 155
>UniRef50_Q9N6L5 Cluster: U2 splicing auxiliary factor, putative;
n=6; Trypanosomatidae|Rep: U2 splicing auxiliary factor,
putative - Leishmania major
Length = 210
Score = 67.3 bits (157), Expect = 8e-10
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Frame = +3
Query: 342 SQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEM 521
S TVL +Y NP D + + +++H+++F ++V + +G I E+
Sbjct: 33 SPTVLFPLMYPNPHAIEHIKDREWNF--ELDKKYLKKHFEHFYKEVWRTFME-FGRIAEL 89
Query: 522 NVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQYE 701
V NLGDH GNV I+F + A V +L + V ELSPVT+ E CC++
Sbjct: 90 RVVSNLGDHLLGNVYIRFEDPQVATRIVKELRGKKLNDIIVLPELSPVTNFAEACCKEDL 149
Query: 702 MGEC-TXSGCGYFMXLK 749
C C Y +K
Sbjct: 150 ENRCQRGEQCNYLHIMK 166
Score = 36.7 bits (81), Expect = 1.3
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 266 CSXYFXIGACRHGDRCSRIHNKP 334
C + +GACRHGD+C+++H +P
Sbjct: 8 CVFFSKMGACRHGDQCTKLHYRP 30
>UniRef50_Q15696 Cluster: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit- related protein 2
(U2(RNU2) small nuclear RNA auxiliary factor 1-like 2);
n=32; Euteleostomi|Rep: U2 small nuclear
ribonucleoprotein auxiliary factor 35 kDa subunit-
related protein 2 (U2(RNU2) small nuclear RNA auxiliary
factor 1-like 2) - Homo sapiens (Human)
Length = 482
Score = 66.5 bits (155), Expect = 1e-09
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Frame = +3
Query: 315 HAFITSQPLSQTVLLQNLYVN-PQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVEC 491
H F TS P T+L+++++ + D S+E + + +F EDV E
Sbjct: 191 HNFPTSSP---TLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEF 247
Query: 492 EDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTD 671
++ G++ + V NL H GNV ++++ EE+ A++ N RW+ GR + E PVT
Sbjct: 248 KN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTR 306
Query: 672 SREXCCRQYEMGEC 713
+ C +E+ +C
Sbjct: 307 WKMAICGLFEIQQC 320
Score = 45.2 bits (102), Expect = 0.004
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = +2
Query: 248 EKDXVXCSXYFXIGACRHGDRCSRIHNKPT 337
EKD C Y GACR GDRCSR HN PT
Sbjct: 166 EKDRANCPFYSKTGACRFGDRCSRKHNFPT 195
>UniRef50_UPI000049A28E Cluster: U2 snRNP auxiliary factor; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: U2 snRNP auxiliary
factor - Entamoeba histolytica HM-1:IMSS
Length = 251
Score = 65.3 bits (152), Expect = 3e-09
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Frame = +3
Query: 447 QEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRW 626
QE Y++F D+ C +G++ +M V +N H GNV +KF E A A+ L +
Sbjct: 52 QEQYEHFFFDLYTLCSG-FGKVVDMIVSENQASHLKGNVLVKFATEAMAEEAIKHLQGQL 110
Query: 627 FGGRPVYAELSPVTDSREXCCRQYEMGEC-TXSGCGYFMXL 746
FG + + D +E C+Q++MG C SGC Y L
Sbjct: 111 FGSVVLNPSYVGIIDLKESRCKQHDMGVCPKHSGCNYLHVL 151
>UniRef50_A2FE85 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 206
Score = 62.1 bits (144), Expect = 3e-08
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Frame = +3
Query: 330 SQPLSQTVLLQNLYVNPQNX-AKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYG 506
S P+S+ +L ++LY +P A GS +SDE Q D F D+ + C+ ++G
Sbjct: 29 SDPMSRILLFKHLYPDPDVFLALLPTGS----VTISDEEKQRAADAFYYDIFLMCQ-RFG 83
Query: 507 EIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXC 686
+ ++ + N D GNV + F+ + A A LNN+++ GR V L+P++
Sbjct: 84 PVEDILIASNKTDIMNGNVYVSFKEVDAAQAAFLTLNNQYYAGRKVECVLTPISRLSNAI 143
Query: 687 CRQYEMGECT-XSGCGYFMXLK 749
C + C S C Y LK
Sbjct: 144 CNE---SACPYGSTCNYVHPLK 162
>UniRef50_O13845 Cluster: RNA-binding protein rsd1; n=1;
Schizosaccharomyces pombe|Rep: RNA-binding protein rsd1
- Schizosaccharomyces pombe (Fission yeast)
Length = 604
Score = 56.4 bits (130), Expect = 1e-06
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = +3
Query: 426 NVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAV 605
N ++E +DV EC++KYG++ + V N G + +KF + A A+
Sbjct: 516 NPAEETSPNWVQELEQDVKEECDEKYGKVVHIAVVPN----ELGQIFVKFENADFAEKAI 571
Query: 606 NDLNNRWFGGRPVYAELSPVTD 671
L+ RWFGGR + A + P TD
Sbjct: 572 TGLHQRWFGGRTIKASILPETD 593
>UniRef50_A7SAD7 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 361
Score = 56.0 bits (129), Expect = 2e-06
Identities = 29/93 (31%), Positives = 43/93 (46%)
Frame = +3
Query: 420 VANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXX 599
V + D E Y+ F DV E E K G++ + N H GNV ++F+ EE
Sbjct: 3 VHHYDDHESFERYEEFFNDVLPEFE-KAGKVVQFKACCNYEPHLRGNVYVQFKDEESCAR 61
Query: 600 AVNDLNNRWFGGRPVYAELSPVTDSREXCCRQY 698
A N RW+ + + E SPVT + C ++
Sbjct: 62 AFAAFNGRWYAQKQLSCEFSPVTRWKSAICDRF 94
>UniRef50_A4PSD8 Cluster: Concanavalin A-like lectin/glucanase; U2
auxiliary factor small subunit; n=1; Medicago
truncatula|Rep: Concanavalin A-like lectin/glucanase; U2
auxiliary factor small subunit - Medicago truncatula
(Barrel medic)
Length = 584
Score = 54.4 bits (125), Expect = 6e-06
Identities = 28/89 (31%), Positives = 46/89 (51%)
Frame = +3
Query: 432 SDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVND 611
+DE ++ ++ F EDV E K+GEI V N H GNV ++++ + A A N
Sbjct: 5 TDEEVERCFEEFYEDVHTEFL-KFGEIVNFKVCKNGSFHLRGNVYVQYKLLDSALLAYNS 63
Query: 612 LNNRWFGGRPVYAELSPVTDSREXCCRQY 698
+N R+F G+ V + +T + C +Y
Sbjct: 64 VNGRYFAGKQVSCKFVNLTRWKVAICGEY 92
>UniRef50_UPI0000E47A69 Cluster: PREDICTED: similar to U2af1-rs2;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to U2af1-rs2 - Strongylocentrotus purpuratus
Length = 684
Score = 54.0 bits (124), Expect = 8e-06
Identities = 27/93 (29%), Positives = 46/93 (49%)
Frame = +3
Query: 435 DEXMQEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDL 614
+E ++ F EDV E + YGE+ ++ V N H GNV +++R EE+A A
Sbjct: 241 EESAYLNFHEFYEDVLPEFRE-YGEVVQLKVCRNWEPHLRGNVYVQYRSEEEAAKAAQVF 299
Query: 615 NNRWFGGRPVYAELSPVTDSREXCCRQYEMGEC 713
R++GG+ + PV+ + C + +C
Sbjct: 300 AGRFYGGKQLDPRYCPVSRWKPAICGLFHRDKC 332
Score = 33.9 bits (74), Expect = 9.0
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 248 EKDXVXCSXYFXIGACRHGDRCSRIHNKP 334
EK CS + GACR +RCSR H P
Sbjct: 178 EKKEEICSFFLKTGACRFKERCSRTHPYP 206
>UniRef50_UPI00015B41F8 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 721
Score = 53.6 bits (123), Expect = 1e-05
Identities = 31/117 (26%), Positives = 51/117 (43%)
Frame = +3
Query: 339 LSQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXE 518
LS +L+ N Y + S + V + H+ +F DV E E K+G+I
Sbjct: 199 LSTVILVPNFYTHFSLERHSHEYDTDVRLEYDHRETRNHFRDFYFDVVPELE-KFGKIKT 257
Query: 519 MNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCC 689
+ N H GN+ +++ E +A A+ L RW+ GR ++ E + R C
Sbjct: 258 LQYCKNTEAHLRGNLYVEYATEREAARALRGLKGRWYAGRQLHCEFVNLKSWRGAIC 314
Score = 34.7 bits (76), Expect = 5.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 227 LAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKP 334
L ++ T+ C + GACR+GD CSR H +P
Sbjct: 162 LRSLNETQPGKEICPFFNKTGACRYGDICSRNHQRP 197
>UniRef50_UPI0000D57884 Cluster: PREDICTED: similar to U2 small
nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit related-protein 2 (U2(RNU2) small nuclear RNA
auxillary factor 1-like 2); n=1; Tribolium
castaneum|Rep: PREDICTED: similar to U2 small nuclear
ribonucleoprotein auxiliary factor 35 kDa subunit
related-protein 2 (U2(RNU2) small nuclear RNA auxillary
factor 1-like 2) - Tribolium castaneum
Length = 347
Score = 53.2 bits (122), Expect = 1e-05
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 2/140 (1%)
Frame = +3
Query: 339 LSQTVLLQNLY--VNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEI 512
+S+ +L+ N Y + + D S L N H+ +F DV E E ++G I
Sbjct: 192 VSRILLIPNFYSHYSLEQTENEYDDSSLEFEN---HETYSHFKDFFFDVLPEME-RFGRI 247
Query: 513 XEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCR 692
+ V N H GNV +++ +A + N RW+GGR + E + + C
Sbjct: 248 RQFKVCCNRESHLRGNVYVEYSTTREAVKSFQVFNGRWYGGRQLSVEFCNIESWKSAICG 307
Query: 693 QYEMGECTXSGCGYFMXLKP 752
+ +C F+ + P
Sbjct: 308 LHSRKKCPKGSSCNFLHVFP 327
>UniRef50_Q1RLC5 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 479
Score = 51.6 bits (118), Expect = 4e-05
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Frame = +3
Query: 402 DGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRR 581
D S L + + SDE + E ++ F +DV E +K+G + ++ V N H GNV +++
Sbjct: 264 DSSDLALEH-SDEDLYEDFEVFYDDVFPEF-NKFGHVEQLKVCCNRDQHLRGNVYVQYAT 321
Query: 582 EEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQYEMGE-CTXSG-CGY 734
A A LN R++GG+ + + C Y G C G C +
Sbjct: 322 VSQAETAFQSLNGRFYGGKLLQCMYVTILSWSSAICGLYCTGRPCPRGGHCNF 374
Score = 37.9 bits (84), Expect = 0.55
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 266 CSXYFXIGACRHGDRCSRIHNKPT 337
C + +GACR GD CS++H KPT
Sbjct: 211 CYFFERVGACRFGDSCSKLHEKPT 234
>UniRef50_UPI00003C039B Cluster: PREDICTED: similar to U2 small
nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit related-protein 2 (U2(RNU2) small nuclear RNA
auxillary factor 1-like 2) (NY-REN-20 antigen); n=1;
Apis mellifera|Rep: PREDICTED: similar to U2 small
nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit related-protein 2 (U2(RNU2) small nuclear RNA
auxillary factor 1-like 2) (NY-REN-20 antigen) - Apis
mellifera
Length = 453
Score = 51.2 bits (117), Expect = 6e-05
Identities = 28/117 (23%), Positives = 50/117 (42%)
Frame = +3
Query: 339 LSQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXE 518
LS+ +L+ + Y + A+ + ++H+ F +DV E E +G I
Sbjct: 199 LSKVILVPSFYTHFSLEKNCAEYDTDIALEFESSETRQHFREFYKDVVPELES-FGRIKT 257
Query: 519 MNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCC 689
+ N H GN+ +++ E +A A+ L RW+ GR + E + R C
Sbjct: 258 LKYCCNTEVHLRGNLYVEYYTEREAARALRRLKGRWYAGRQLNCEFVNLKSWRSAVC 314
>UniRef50_Q7PL83 Cluster: CG17540-PA, isoform A; n=7;
Endopterygota|Rep: CG17540-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 403
Score = 48.8 bits (111), Expect = 3e-04
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +3
Query: 474 DVXVECEDKYGEIXEMNVXDNLGD--HXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVY 647
+V EC KYGE+ + + ++ G + ++FRR E A AV DLN R+FGGR V
Sbjct: 329 EVKDECNTKYGEVNSVIIHESFGTVPEDAVKIFVEFRRIESAIKAVVDLNGRFFGGRQVR 388
Query: 648 A 650
A
Sbjct: 389 A 389
>UniRef50_UPI0000D563A7 Cluster: PREDICTED: similar to CG17540-PA.3;
n=3; Endopterygota|Rep: PREDICTED: similar to
CG17540-PA.3 - Tribolium castaneum
Length = 387
Score = 48.0 bits (109), Expect = 5e-04
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +3
Query: 459 DNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXI--KFRREEDAXXAVNDLNNRWFG 632
D+ +V EC KYGE+ + + + ++ V I +FRR E A AV DLN R+FG
Sbjct: 307 DDLEPEVKDECNTKYGEVTSVIIHETQAENPEEAVRIFVEFRRIESAIKAVVDLNGRFFG 366
Query: 633 GRPVYA 650
GR V A
Sbjct: 367 GRQVKA 372
>UniRef50_O43719 Cluster: HIV Tat-specific factor 1; n=30;
Euteleostomi|Rep: HIV Tat-specific factor 1 - Homo
sapiens (Human)
Length = 755
Score = 47.6 bits (108), Expect = 7e-04
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
ED+ VEC K+G+I ++ + D H G + FR E+A + L+ RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 651 E 653
+
Sbjct: 345 Q 345
>UniRef50_UPI000065E4EC Cluster: HIV Tat-specific factor 1
(Tat-SF1).; n=1; Takifugu rubripes|Rep: HIV Tat-specific
factor 1 (Tat-SF1). - Takifugu rubripes
Length = 417
Score = 46.0 bits (104), Expect = 0.002
Identities = 21/65 (32%), Positives = 36/65 (55%)
Frame = +3
Query: 459 DNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGR 638
+ + ED+ VECE K+G + ++ + D H G + F+ ++A + N RWFGGR
Sbjct: 273 NEYREDLRVECE-KFGAVKKVILFDR---HPDGVASVAFKEPDEADACIQSFNGRWFGGR 328
Query: 639 PVYAE 653
+ A+
Sbjct: 329 QLSAQ 333
>UniRef50_Q5EAL1 Cluster: Htatsf1-prov protein; n=4; Tetrapoda|Rep:
Htatsf1-prov protein - Xenopus tropicalis (Western
clawed frog) (Silurana tropicalis)
Length = 524
Score = 46.0 bits (104), Expect = 0.002
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
ED+ ECE K+G++ ++ + D H G + F+ E+ + LN RWFGGR +
Sbjct: 366 EDLRSECE-KFGQVKKLLIFDQ---HPDGVASVAFKEAEEGDMCIQALNGRWFGGRQLIV 421
Query: 651 E 653
E
Sbjct: 422 E 422
>UniRef50_Q7PVF2 Cluster: ENSANGP00000010643; n=2; Culicidae|Rep:
ENSANGP00000010643 - Anopheles gambiae str. PEST
Length = 244
Score = 45.6 bits (103), Expect = 0.003
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 459 DNFCEDVXVECEDKYGEIXEMNVXD--NLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFG 632
D +V EC KYG++ + + + N+ + ++F+R E A AV DLN R+FG
Sbjct: 164 DELEPEVKDECNTKYGDVVTVVIHEVPNVVPEEAVRIFVEFKRMESAIKAVVDLNGRFFG 223
Query: 633 GRPVYA 650
GR V A
Sbjct: 224 GRQVRA 229
>UniRef50_A7SAD9 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 357
Score = 45.6 bits (103), Expect = 0.003
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2
Query: 230 AAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKP 334
+A GTE+D V C+ Y G+CR G+RCSR H +P
Sbjct: 186 SANFGTEQDTVNCAFYLKTGSCRFGERCSRQHPRP 220
>UniRef50_Q4PI99 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 640
Score = 45.6 bits (103), Expect = 0.003
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Frame = +3
Query: 414 LVVANVSD--EXMQEHYD-NFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRRE 584
L++ N+ D E + ++D + EDV EC+ KYG + ++V + G + + F
Sbjct: 562 LLLKNMFDPAEETEPNWDTDLAEDVKEECQAKYGPVTSIHVEKDSA----GEIYVTFANL 617
Query: 585 EDAXXAVNDLNNRWFGGRPVYAE 653
+ + A++ LN R+FGG+P+ A+
Sbjct: 618 DASRKALDGLNGRFFGGKPISAQ 640
>UniRef50_Q4MZ00 Cluster: Splicing factor, putative; n=2;
Theileria|Rep: Splicing factor, putative - Theileria
parva
Length = 644
Score = 44.4 bits (100), Expect = 0.006
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Frame = +3
Query: 402 DGSHLVVANV---SD-EXMQEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXI 569
+ S+LV++N+ +D E +E +D EDV EC KYG + ++ V D G V +
Sbjct: 547 NSSNLVLSNMYTSADYEDNREFFDEIEEDVKEEC-GKYGTVIQVFVNKRNPD---GKVYV 602
Query: 570 KFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSR 677
KF+ +DA A L R+F G + ++S ++D +
Sbjct: 603 KFKNNDDAQAANKSLQGRYFAGNTI--QVSYISDDQ 636
>UniRef50_Q9Y7A8 Cluster: Pad-1; n=18; Pezizomycotina|Rep: Pad-1 -
Neurospora crassa
Length = 575
Score = 44.4 bits (100), Expect = 0.006
Identities = 26/79 (32%), Positives = 41/79 (51%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
+DV E E KYG + +++ N G++ +KF + + A+ LN R+FGGR + A
Sbjct: 497 DDVREEAEAKYGHVVHISLDPNSA----GDIYLKFDKVQGGENAIKGLNGRYFGGRMITA 552
Query: 651 ELSPVTDSREXCCRQYEMG 707
+PV D+ RQ G
Sbjct: 553 --APVVDAVYSKSRQPHEG 569
>UniRef50_Q5KGC9 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 615
Score = 42.7 bits (96), Expect = 0.019
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +3
Query: 414 LVVANV--SDEXMQEHYD-NFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRRE 584
+VV N+ +E + ++D + EDV E E KYG + + V G V I+F
Sbjct: 526 IVVHNMFNPEEETERNWDLDLAEDVKGEVESKYGRVKRIKVEKMSA----GEVYIEFIDT 581
Query: 585 EDAXXAVNDLNNRWFGGRPVYA 650
+ A AV LN R+FGGR + A
Sbjct: 582 DSAIKAVKGLNGRFFGGRQLQA 603
>UniRef50_UPI0000E4A87D Cluster: PREDICTED: similar to RNA-binding
region (RNP1, RRM) containing 2; n=4; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to RNA-binding region
(RNP1, RRM) containing 2 - Strongylocentrotus purpuratus
Length = 600
Score = 42.3 bits (95), Expect = 0.026
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
+DV EC +K+G + ++V D GNV +K + A A+N+L+NRWF G+ + A
Sbjct: 515 DDVIEEC-NKHGGVLHIHV-DKASPQ--GNVYVKCPTAQIAMAALNNLHNRWFAGKMITA 570
Query: 651 ELSPVTD 671
PV +
Sbjct: 571 AYMPVAN 577
>UniRef50_Q01ID4 Cluster: OSIGBa0092E01.1 protein; n=7;
Magnoliophyta|Rep: OSIGBa0092E01.1 protein - Oryza
sativa (Rice)
Length = 476
Score = 42.3 bits (95), Expect = 0.026
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 474 DVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
DV EC K G + + V +N H G + +KF+ +D + +N RWFGG + A
Sbjct: 389 DVREECM-KLGPVDNVKVCEN---HPEGVILVKFKDRKDGIKCIEKMNGRWFGGNQIQA 443
>UniRef50_Q5CSH1 Cluster: Ro ribonucleoprotein-binding protein 1,
RNA binding protein with 3x RRM domains; n=2;
Cryptosporidium|Rep: Ro ribonucleoprotein-binding
protein 1, RNA binding protein with 3x RRM domains -
Cryptosporidium parvum Iowa II
Length = 693
Score = 42.3 bits (95), Expect = 0.026
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 459 DNFCEDVXVECEDKYGEIXEM--NVXDNLGDHXXG-NVXIKFRREEDAXXAVNDLNNRWF 629
D E+V +EC KYG++ ++ +V +N+ + + F A AV LNNRWF
Sbjct: 613 DELKEEVKIECS-KYGKVYDVRIHVSNNISKPSDRVRIFVVFESPSMAQIAVPALNNRWF 671
Query: 630 GGRPVYAEL 656
GG V+ L
Sbjct: 672 GGNQVFCSL 680
>UniRef50_Q96I25 Cluster: Splicing factor 45; n=39;
Euteleostomi|Rep: Splicing factor 45 - Homo sapiens
(Human)
Length = 401
Score = 41.5 bits (93), Expect = 0.045
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +3
Query: 486 ECEDKYGEIXEMNVXDNLG--DHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
ECE KYG++ + + + G D + ++F R E A AV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKA 384
>UniRef50_UPI0000E45F1C Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 462
Score = 41.1 bits (92), Expect = 0.059
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGR 638
+DV EC YGE+ ++ + D H G V +KF+ E+A + LN RWF R
Sbjct: 308 DDVKDECST-YGEVKKVLIFDR---HPDGVVSVKFKDVENADKCIQSLNGRWFAKR 359
>UniRef50_A7S8H1 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 396
Score = 40.7 bits (91), Expect = 0.078
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +3
Query: 459 DNFCEDVXVECEDKYGEIXEMNVXD---NLGDHXXGNVXIKFRREEDAXXAVNDLNNRWF 629
D+ + EC KYGE+ ++ + + D + ++F R E A AV DLN R+F
Sbjct: 314 DDLQPETAEECA-KYGEVVKVIIYEIPVGAPDDEAVRIFVEFTRMESAIKAVVDLNGRYF 372
Query: 630 GGRPVYA 650
GGR V A
Sbjct: 373 GGRTVKA 379
>UniRef50_A7TMQ4 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 300
Score = 40.7 bits (91), Expect = 0.078
Identities = 25/90 (27%), Positives = 46/90 (51%)
Frame = +3
Query: 381 QNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGN 560
+N K+A S++V ++ E E D +D+ C+ + G I + + LG
Sbjct: 183 ENRKKTAVLSNIV--DIYGEQNDEELDEITDDIIEGCQ-QMGTIEDFKLLKELG-----K 234
Query: 561 VXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
I+F ++E+A ++ +NNR+F GR + A
Sbjct: 235 AEIRFSKKEEAHHCISKMNNRFFDGRKIVA 264
>UniRef50_A4PSD9 Cluster: U2 auxiliary factor small subunit; n=1;
Medicago truncatula|Rep: U2 auxiliary factor small
subunit - Medicago truncatula (Barrel medic)
Length = 251
Score = 40.3 bits (90), Expect = 0.10
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +2
Query: 242 GTEKDXVXCSXYFXIGACRHGDRCSRIHNKP 334
GTE D C + ACR GDRCSR+H P
Sbjct: 185 GTELDKAHCPFHLKTAACRFGDRCSRVHFYP 215
>UniRef50_A4S1N4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 516
Score = 39.5 bits (88), Expect = 0.18
Identities = 27/76 (35%), Positives = 37/76 (48%)
Frame = +3
Query: 426 NVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAV 605
N ++E E + + EDV ECE K+GEI V + G V +KF + A
Sbjct: 431 NAAEETDPEWWLDIAEDVKGECE-KFGEITHAFVDKD----SQGFVYLKFVDTASSTRAQ 485
Query: 606 NDLNNRWFGGRPVYAE 653
L+ RWF GR + AE
Sbjct: 486 QALHARWFAGRKIAAE 501
>UniRef50_A7AMD5 Cluster: Splicing factor, CC1-like family protein;
n=1; Babesia bovis|Rep: Splicing factor, CC1-like family
protein - Babesia bovis
Length = 488
Score = 39.5 bits (88), Expect = 0.18
Identities = 26/72 (36%), Positives = 37/72 (51%)
Frame = +3
Query: 456 YDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGG 635
+D EDV EC +KYG++ ++ + + D G V +KF D+ A LN R F G
Sbjct: 415 FDEVEEDVNEEC-NKYGKVLKVYINRGVID---GKVWVKFGNVVDSTVAFRSLNGRVFAG 470
Query: 636 RPVYAELSPVTD 671
+ AE VTD
Sbjct: 471 NTIKAEY--VTD 480
>UniRef50_Q8IE99 Cluster: Splicing factor, putative; n=1; Plasmodium
falciparum 3D7|Rep: Splicing factor, putative -
Plasmodium falciparum (isolate 3D7)
Length = 864
Score = 39.1 bits (87), Expect = 0.24
Identities = 27/109 (24%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Frame = +3
Query: 342 SQTVLLQNLYVNPQNXAKSADGSHLVVANV---SDEXM---QEHYDNFCEDVXVECEDKY 503
+ ++ +N +V N + ++LV++N+ +DE + + +++ EDV EC KY
Sbjct: 745 ANAIMARNSFVPSTNNINNNVTTNLVLSNMFSSNDENIGSDPDFFNDILEDVKEECS-KY 803
Query: 504 GEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
G++ + + D G + IK+ +++ + LN R+FGG + A
Sbjct: 804 GKVVNIWLDTKNID---GKIYIKYSNNDESLKSFQFLNGRYFGGSLINA 849
>UniRef50_Q4U9D6 Cluster: RNA binding protein, putative; n=2;
Theileria|Rep: RNA binding protein, putative - Theileria
annulata
Length = 479
Score = 38.7 bits (86), Expect = 0.32
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = +3
Query: 414 LVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDA 593
+V+ N+ D + + +N +V EC +KYG + + + + + +V + F +DA
Sbjct: 390 IVIYNMVDPKLVD--ENLQNEVKDEC-NKYGTVTSVYLHFSPNNDSL-SVFVVFNTPQDA 445
Query: 594 XXAVNDLNNRWFGGRPV 644
AV LN RWF GR +
Sbjct: 446 DSAVRALNTRWFNGRQI 462
>UniRef50_A2QMQ0 Cluster: Contig An07c0080, complete genome; n=11;
Pezizomycotina|Rep: Contig An07c0080, complete genome -
Aspergillus niger
Length = 598
Score = 38.7 bits (86), Expect = 0.32
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = +3
Query: 450 EHYDNFCEDVXVECEDKYGEIXEMNVXDNLG----DHXXGNVXIKFRREEDAXXAVNDLN 617
E YD C+DV EC KYG + E+ V G G + +KF E A+ L
Sbjct: 496 EDYDEICDDVRDEC-SKYGTVVELKVPRPTGGSRQSPGVGKIFVKFDTVESTTNALKALA 554
Query: 618 NRWFGGRPV 644
R F R V
Sbjct: 555 GRKFSDRTV 563
>UniRef50_A7R5K6 Cluster: Chromosome undetermined scaffold_993,
whole genome shotgun sequence; n=3; core
eudicotyledons|Rep: Chromosome undetermined
scaffold_993, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 88
Score = 38.3 bits (85), Expect = 0.42
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 546 HXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
H G V +K++ DA + +N RWFGGR ++A
Sbjct: 21 HPQGVVLVKYKDRRDAQKCIELMNGRWFGGRQIHA 55
>UniRef50_A2EKZ8 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 220
Score = 38.3 bits (85), Expect = 0.42
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 498 KYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPV 644
KYGE+ + + N G + F +EDA AV++LNN+ GR V
Sbjct: 51 KYGEVLDSKIPTNPAGRSRGYGFVSFALKEDAQKAVDELNNKEMEGRKV 99
>UniRef50_Q3UZ51 Cluster: Adult male thymus cDNA, RIKEN full-length
enriched library, clone:5830435B10 product:RNA-binding
region (RNP1, RRM) containing 2, full insert sequence;
n=20; Eumetazoa|Rep: Adult male thymus cDNA, RIKEN
full-length enriched library, clone:5830435B10
product:RNA-binding region (RNP1, RRM) containing 2,
full insert sequence - Mus musculus (Mouse)
Length = 169
Score = 37.9 bits (84), Expect = 0.55
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
+DV EC +K+G + + V N GNV +K A AVN L+ RWF G+ + A
Sbjct: 87 DDVIEEC-NKHGGVIHIYVDKNSAQ---GNVYVKCPSIAAAIAAVNALHGRWFAGKMITA 142
Query: 651 ELSPV 665
P+
Sbjct: 143 AYVPL 147
>UniRef50_Q5C0M1 Cluster: SJCHGC01849 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01849 protein - Schistosoma
japonicum (Blood fluke)
Length = 239
Score = 37.9 bits (84), Expect = 0.55
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +3
Query: 459 DNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGR 638
D E+V EC + YG + + V ++ + + I+F R +DA A + LN R+F GR
Sbjct: 164 DELQEEVMEECGN-YGSV--LRVLIHIMTNQDVRIFIQFDRSDDAKAACSALNQRYFAGR 220
Query: 639 PVYAEL 656
V A L
Sbjct: 221 VVQARL 226
>UniRef50_A4RFH0 Cluster: Putative uncharacterized protein; n=4;
Pezizomycotina|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 620
Score = 37.9 bits (84), Expect = 0.55
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Frame = +3
Query: 432 SDEXMQ-EHYDNFCEDVXVECEDKYGEIXEMNV-XDNLGDH---XXGNVXIKFRREEDAX 596
+DE M + Y+ CEDV EC KYG + E+ V + G G + +KF E +
Sbjct: 531 ADELMDNDDYEEICEDVQEECA-KYGTVIELKVPRPSSGAKQAAGVGKIYVKFDSIESST 589
Query: 597 XAVNDLNNRWFGGRPVYAELSP 662
A+ L R F R V P
Sbjct: 590 KALKALGGRKFADRTVVTTYFP 611
>UniRef50_Q14498 Cluster: RNA-binding protein 39; n=55;
Euteleostomi|Rep: RNA-binding protein 39 - Homo sapiens
(Human)
Length = 530
Score = 37.9 bits (84), Expect = 0.55
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
+DV EC +K+G + + V N GNV +K A AVN L+ RWF G+ + A
Sbjct: 448 DDVIEEC-NKHGGVIHIYVDKNSAQ---GNVYVKCPSIAAAIAAVNALHGRWFAGKMITA 503
Query: 651 ELSPV 665
P+
Sbjct: 504 AYVPL 508
>UniRef50_P42698 Cluster: DNA-damage-repair/toleration protein
DRT111, chloroplast precursor; n=7; Magnoliophyta|Rep:
DNA-damage-repair/toleration protein DRT111, chloroplast
precursor - Arabidopsis thaliana (Mouse-ear cress)
Length = 387
Score = 37.9 bits (84), Expect = 0.55
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +3
Query: 459 DNFCEDVXVECEDKYGEIXEMNVXD----NLGDHXXGNVXIKFRREEDAXXAVNDLNNRW 626
D ++V EC KYG + + + + N H + ++F R E+ A+ DL+ R+
Sbjct: 298 DELEDEVGGEC-GKYGTVTRVLIFEITEPNFPVHEAVRIFVQFSRPEETTKALVDLDGRY 356
Query: 627 FGGRPVYA 650
FGGR V A
Sbjct: 357 FGGRTVRA 364
>UniRef50_A7SRZ1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 313
Score = 37.5 bits (83), Expect = 0.73
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +3
Query: 474 DVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAE 653
D+ ECE K+G++ ++ V D H G + F+ A + +N RWF GR + A+
Sbjct: 209 DLRKECE-KFGDVRKVIVFDR---HSEGICSVAFKEHPPADACLERMNGRWFAGRRLAAD 264
>UniRef50_Q9U2F5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 434
Score = 37.1 bits (82), Expect = 0.97
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 498 KYGEIXEMNVX-DNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPV 644
K+GE+ E + DN + G + + R EDA A++++N W G R +
Sbjct: 154 KFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTI 203
>UniRef50_Q8TAS1 Cluster: Serine/threonine-protein kinase Kist;
n=28; Euteleostomi|Rep: Serine/threonine-protein kinase
Kist - Homo sapiens (Human)
Length = 419
Score = 37.1 bits (82), Expect = 0.97
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 447 QEHYDNFCEDVXVECEDKYGEIXEMNV-XDNLGDHXXGNVXIKFRREEDAXXAVNDLNNR 623
+E Y++ EDV EC+ KYG + + V +N G G V +++ D+ A L R
Sbjct: 337 EEEYEDVVEDVKEECQ-KYGPVVSLLVPKENPG---RGQVFVEYANAGDSKAAQKLLTGR 392
Query: 624 WFGGRPVYAELSPVT 668
F G+ V A P++
Sbjct: 393 MFDGKFVVATFYPLS 407
>UniRef50_Q9SY74 Cluster: F14N23.20; n=3; Arabidopsis thaliana|Rep:
F14N23.20 - Arabidopsis thaliana (Mouse-ear cress)
Length = 836
Score = 36.7 bits (81), Expect = 1.3
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 546 HXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQY 698
H GNV + +R E A A +N R+F G+ V E ++ + C +Y
Sbjct: 412 HLKGNVYVHYRSLESAILAYQSINGRYFAGKQVNCEFVNISRWKVAICGEY 462
Score = 36.3 bits (80), Expect = 1.7
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 248 EKDXVXCSXYFXIGACRHGDRCSRIHNKP 334
E D C + GACR G RCSR+H P
Sbjct: 268 EMDKAHCPFHLKTGACRFGQRCSRVHFYP 296
>UniRef50_Q5CIH5 Cluster: Splicing factor; n=2; Cryptosporidium|Rep:
Splicing factor - Cryptosporidium hominis
Length = 563
Score = 36.7 bits (81), Expect = 1.3
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +3
Query: 435 DEXMQEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDL 614
DE +++ + DV EC KYG + E + D GNV +K+ R E+A A
Sbjct: 482 DETIEQILEEIQADVEEEC-GKYGTLLECFLDKEKMD---GNVWVKYSRPEEASKAKMVF 537
Query: 615 NNRWFGGR 638
+ R+F GR
Sbjct: 538 HGRFFAGR 545
>UniRef50_Q4UI15 Cluster: RNA binding protein, putative; n=3;
Piroplasmida|Rep: RNA binding protein, putative -
Theileria annulata
Length = 373
Score = 36.7 bits (81), Expect = 1.3
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +3
Query: 426 NVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAV 605
++ D E D F E++ E + + E+ + H G V IKF+ DA +
Sbjct: 244 SMEDAMKYEAGDEFYEELKEEILSEIKKYVEVEKVTPIARHPQGVVCIKFKNSSDAEVFI 303
Query: 606 NDLNNRWFGGR 638
+ N R F GR
Sbjct: 304 SKFNGRMFDGR 314
>UniRef50_A2FG00 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 689
Score = 36.7 bits (81), Expect = 1.3
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 498 KYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAE 653
KYGE+ + G V +F R EDA A++DL N G+P+Y +
Sbjct: 120 KYGEVLSCRIIKKFNGKNIGYV--QFARVEDANRALDDLQNALIEGQPIYVD 169
>UniRef50_UPI0000587D6B Cluster: PREDICTED: similar to 2410104I19Rik
protein; n=2; Coelomata|Rep: PREDICTED: similar to
2410104I19Rik protein - Strongylocentrotus purpuratus
Length = 595
Score = 36.3 bits (80), Expect = 1.7
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Frame = +3
Query: 381 QNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVX-DNLGDHXXG 557
Q + +D +V+ N+ +++ D +V EC K+G + + + + G+
Sbjct: 489 QKLLRKSDSHVMVLRNMVG--VEDLDDELEGEVTEEC-GKFGTVNRVVIYQERQGEEEDA 545
Query: 558 NVXIK----FRREEDAXXAVNDLNNRWFGGRPVYAEL 656
V +K F +A A + LN+RWFGGR V E+
Sbjct: 546 EVIVKIFVEFSDPAEAEQAADSLNSRWFGGRMVRGEI 582
>UniRef50_Q8T8Y4 Cluster: AT16577p; n=3; Sophophora|Rep: AT16577p -
Drosophila melanogaster (Fruit fly)
Length = 449
Score = 36.3 bits (80), Expect = 1.7
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 450 EHYDNFCEDVXVECEDKYGEIXEMNVXDNLGD---HXXGNVXIKFRREEDAXXAVNDLNN 620
E +++ D+ EC K+GE+ + + +G G V ++F ED+ A+ L+
Sbjct: 367 EEFEDIRTDIKQECA-KFGEVRSIKIPRPIGQFPKRGCGKVFVQFESVEDSQKALKALSG 425
Query: 621 RWFGGRPV 644
R F GR V
Sbjct: 426 RKFSGRIV 433
>UniRef50_Q1RPX5 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 335
Score = 35.5 bits (78), Expect = 2.9
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 266 CSXYFXIGACRHGDRCSRIHNKPTFVSDCITTKLVCKS 379
C+ Y+ IG C +GD+C+ H + S + T+L CKS
Sbjct: 197 CTTYYTIGTCPYGDKCNFYHTEDEKNSTRVKTRL-CKS 233
>UniRef50_A0DYF5 Cluster: Chromosome undetermined scaffold_7, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_7,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 823
Score = 35.5 bits (78), Expect = 2.9
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 555 GNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELS 659
G + F +EDA AVN LNN+ GG +YA +S
Sbjct: 584 GFAYVDFTSDEDAQQAVNILNNKMVGGEKLYAAIS 618
>UniRef50_Q13434 Cluster: Makorin-4; n=58; Euteleostomi|Rep:
Makorin-4 - Homo sapiens (Human)
Length = 485
Score = 35.5 bits (78), Expect = 2.9
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 260 VXCSXYFXIGACRHGDRCSRIHNKPTFVSDCITTKLVCKST 382
V C YF G C +GDRC H+KP + T+L KS+
Sbjct: 123 VVCK-YFQRGCCVYGDRCRCEHSKPLKQEEATATELTTKSS 162
>UniRef50_Q4TA11 Cluster: Chromosome undetermined SCAF7478, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF7478, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 579
Score = 35.1 bits (77), Expect = 3.9
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +3
Query: 474 DVXVECEDKYGEIXEMNVX-DNLGDHXXGNVXIK----FRREEDAXXAVNDLNNRWFGGR 638
+V EC K+G + + V + G+ V +K F + A+ LN RWFGGR
Sbjct: 502 EVTEEC-GKFGRVKRVIVYQERQGEEDGAEVIVKIFVEFGEVAEMDRAIRALNQRWFGGR 560
Query: 639 PVYAEL 656
V AE+
Sbjct: 561 QVVAEV 566
>UniRef50_A5K320 Cluster: Splicing factor, putative; n=5;
Plasmodium|Rep: Splicing factor, putative - Plasmodium
vivax
Length = 1016
Score = 35.1 bits (77), Expect = 3.9
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +3
Query: 450 EHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWF 629
+ + + EDV EC KYG I ++ + D G + IK+ +++ A LN R+F
Sbjct: 941 DFFTDIIEDVKEECS-KYGSIAKIWLDSKNID---GKIYIKYATPDESLKAFQFLNGRYF 996
Query: 630 GGRPVYA 650
GG + A
Sbjct: 997 GGSLISA 1003
>UniRef50_UPI00006CB36A Cluster: RNA binding motif protein; n=1;
Tetrahymena thermophila SB210|Rep: RNA binding motif
protein - Tetrahymena thermophila SB210
Length = 708
Score = 34.7 bits (76), Expect = 5.1
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 498 KYGEIXEMNVXDNLGDHXX-GNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELS 659
KYGEI E+N+ N + G ++F + A A+N+LN + GR + +L+
Sbjct: 50 KYGEIIEINIPVNPSTNKSKGFAFVQFANKNCALKAINELNGTQWKGRNIVLDLA 104
>UniRef50_Q9ZVW9 Cluster: Putative splicing factor; n=3; Arabidopsis
thaliana|Rep: Putative splicing factor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 561
Score = 34.7 bits (76), Expect = 5.1
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +3
Query: 432 SDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVND 611
S E + ++ EDV EC K+G++ + V N G V ++F + A A
Sbjct: 476 STETEDDFDEDIKEDVKEECS-KFGKLNHIFVDKN----SVGFVYLRFENAQAAIGAQRA 530
Query: 612 LNNRWFGGRPVYA 650
L+ RWF G+ + A
Sbjct: 531 LHGRWFAGKMITA 543
>UniRef50_Q7Q0R8 Cluster: ENSANGP00000012185; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000012185 - Anopheles gambiae
str. PEST
Length = 497
Score = 34.7 bits (76), Expect = 5.1
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 227 LAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKP 334
L +I T D C + GACRHG RC H P
Sbjct: 155 LQSIQHTRADAEDCKFFLKTGACRHGYRCGGNHPTP 190
>UniRef50_Q5KF11 Cluster: Splicing factor u2af-associated protein 2,
putative; n=2; Filobasidiella neoformans|Rep: Splicing
factor u2af-associated protein 2, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 489
Score = 34.7 bits (76), Expect = 5.1
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
E+V E E G++ + + D D G + IKF+ A V +NNR+F GR +YA
Sbjct: 387 EEVREEAET-LGQVTSVILYDKEED---GVMTIKFKEPVSAQACVAKMNNRYFDGRVIYA 442
Query: 651 EL 656
L
Sbjct: 443 GL 444
>UniRef50_UPI00004991C4 Cluster: RNA-binding protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 255
Score = 34.3 bits (75), Expect = 6.8
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +3
Query: 411 HLVVANVSDEXM---QEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRR 581
H+V+ N+ D ++ ++ EDV E + K G + ++ V + + G V IKF+
Sbjct: 142 HVVIKNMFDLKKPKDEQFFNELKEDVEEEVKAKCGSVEKVTVFNT---NPEGIVIIKFKD 198
Query: 582 EEDAXXAVNDLNNRWF 629
A V +N RWF
Sbjct: 199 HSAAEQCVALMNGRWF 214
>UniRef50_A7P8E1 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 577
Score = 34.3 bits (75), Expect = 6.8
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +3
Query: 414 LVVANVSDEXMQEHYD---NFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRRE 584
L++ N+ D ++ D + EDV EC K+G + + V N G V ++F
Sbjct: 485 LMLKNMFDPKLETEPDFDLDIKEDVQDECS-KFGTVKHIYVDKNSA----GFVFLRFENT 539
Query: 585 EDAXXAVNDLNNRWFGGRPVYA 650
+ A A L+ RWF G+ + A
Sbjct: 540 QAAISAQRALHGRWFAGKMITA 561
>UniRef50_Q57ZE9 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 1631
Score = 34.3 bits (75), Expect = 6.8
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 306 IAVHAFITSQPLSQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQ 449
+ +H F+ + +T++L + + P N A + L VANVSD Q
Sbjct: 1090 VRLHRFVRLIAVKRTIILSSFVLEPVNLASATSALQLTVANVSDTAEQ 1137
>UniRef50_A4QVU3 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 513
Score = 34.3 bits (75), Expect = 6.8
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +3
Query: 459 DNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGR 638
+ +++ EC +KYG + + V N V IKF + A AVN L+ R F G
Sbjct: 441 EGLAQEIGEECGEKYGRVERLYVDVNTRQ-----VFIKFTDQVSALRAVNALDGRIFNGN 495
Query: 639 PV 644
V
Sbjct: 496 EV 497
>UniRef50_Q54QQ7 Cluster: Putative RNA splicing factor; n=1;
Dictyostelium discoideum AX4|Rep: Putative RNA splicing
factor - Dictyostelium discoideum AX4
Length = 727
Score = 33.9 bits (74), Expect = 9.0
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +3
Query: 414 LVVANVSDEXMQ--EHYD-NFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRRE 584
L++ N+ D + E++D + + EC +G+I + + N G + I++
Sbjct: 637 LILRNMFDPETETEENWDQDILSETHAECST-FGKIMHIYLDKNT----KGCIYIRYDNN 691
Query: 585 EDAXXAVNDLNNRWFGGRPVYAELSP 662
E A+ L+ RWF + + AEL P
Sbjct: 692 ESPLKAIQKLHGRWFSKKQIIAELVP 717
>UniRef50_Q9UHX1 Cluster: Poly(U)-binding-splicing factor PUF60 (60
kDa poly(U)-binding-splicing factor); n=59;
Eumetazoa|Rep: Poly(U)-binding-splicing factor PUF60 (60
kDa poly(U)-binding-splicing factor) - Homo sapiens
(Human)
Length = 559
Score = 33.9 bits (74), Expect = 9.0
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +3
Query: 381 QNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVX-DNLGDHXXG 557
Q + + + +V+ N+ D ++ D+ +V EC K+G + + + + G+
Sbjct: 453 QKLLRKQESTVMVLRNMVDP--KDIDDDLEGEVTEEC-GKFGAVNRVIIYQEKQGEEEDA 509
Query: 558 NVXIK----FRREEDAXXAVNDLNNRWFGGRPVYAEL 656
+ +K F + A+ LN RWF GR V AE+
Sbjct: 510 EIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEV 546
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,452,480
Number of Sequences: 1657284
Number of extensions: 10411057
Number of successful extensions: 22716
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 21027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22562
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 129174826121
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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