Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_B02
(1269 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0125 + 27861368-27862282 119 4e-27
01_06_0188 - 27310814-27311138,27311197-27311547,27311682-273116... 102 7e-22
02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315... 62 9e-10
04_04_0376 + 24809804-24809888,24810575-24810703,24810797-248110... 42 8e-04
09_01_0079 - 1159963-1160211,1160303-1160509,1160631-1160801,116... 37 0.039
11_06_0418 - 23317077-23317343,23317614-23317787,23317886-233179... 36 0.090
01_05_0166 + 18844468-18845184,18847394-18847690 35 0.12
08_02_0162 + 13464698-13464974,13465719-13465837,13465920-134665... 33 0.36
01_01_0769 - 5944910-5946613,5946768-5946887,5948243-5948300,594... 31 1.5
03_03_0042 + 14009649-14009866,14011342-14011419,14011791-140119... 31 1.9
03_02_0555 + 9431451-9431688,9432685-9432803,9432886-9433079,943... 31 1.9
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 31 1.9
02_05_1332 + 35758657-35758728,35758959-35760689 31 1.9
06_03_0614 - 22753092-22753349,22754059-22754277,22754712-227549... 31 2.6
01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,856... 31 2.6
>05_07_0125 + 27861368-27862282
Length = 304
Score = 119 bits (287), Expect = 4e-27
Identities = 59/139 (42%), Positives = 78/139 (56%)
Frame = +3
Query: 339 LSQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXE 518
+S T++L N+Y P D + E MQEH+++F ED+ E K+GE+
Sbjct: 42 VSPTIVLANMYQRPDMITPGVDAQG---QPIDPEKMQEHFEDFYEDIYEELS-KFGEVET 97
Query: 519 MNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQY 698
+NV DNL DH GNV ++FR EE A A N L R++ GRP+ E SPVTD RE CRQ+
Sbjct: 98 LNVCDNLADHMIGNVYVQFREEEQAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQF 157
Query: 699 EMGECTXSGCGYFMXLKPI 755
E C G FM +K I
Sbjct: 158 EENSCNRGGYCNFMHVKQI 176
Score = 73.3 bits (172), Expect = 4e-13
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = +2
Query: 218 AEYLAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKPT 337
AE+LA+I GTEKD V C YF IGACRHGDRCSR+HN+PT
Sbjct: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPT 41
>01_06_0188 -
27310814-27311138,27311197-27311547,27311682-27311693,
27313598-27313662,27314945-27314968
Length = 258
Score = 102 bits (244), Expect = 7e-22
Identities = 50/123 (40%), Positives = 68/123 (55%)
Frame = +3
Query: 339 LSQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXE 518
+S TV+ N+Y P D + MQEH+++F ED+ E K+GEI
Sbjct: 37 ISPTVVFANMYQRPDMITPGVDAQG---QPIDPRQMQEHFEDFYEDIFEELS-KFGEIEN 92
Query: 519 MNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQY 698
+NV DNL DH GNV ++FR E+ A A L R++ GRP+ + SPVTD RE CRQ
Sbjct: 93 LNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQL 152
Query: 699 EMG 707
+G
Sbjct: 153 GLG 155
>02_04_0232 +
21130122-21130454,21130895-21131053,21131424-21131582,
21132420-21132512,21133321-21133437,21133623-21133697,
21133878-21134104,21134200-21135073
Length = 678
Score = 62.1 bits (144), Expect = 9e-10
Identities = 35/119 (29%), Positives = 59/119 (49%)
Frame = +3
Query: 342 SQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEM 521
S T+L++N+Y P + +G +DE +++ Y+ F EDV E K+GE+
Sbjct: 194 SCTLLMRNMYSGPGLALEQDEG-----LECTDEEIEQSYEEFYEDVHTEFL-KFGELVNF 247
Query: 522 NVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQY 698
V N H GNV + ++ + A A + +N R+F G+ + E VT + C +Y
Sbjct: 248 KVCRNGSLHLRGNVYVHYKSLDSALIAYSSMNGRYFAGKQITCEFVAVTRWKVAICGEY 306
Score = 34.7 bits (76), Expect = 0.16
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 248 EKDXVXCSXYFXIGACRHGDRCSRIHNKP 334
++D C + GACR G RCSR+H P
Sbjct: 163 QQDKAHCPFHLKTGACRFGVRCSRVHFYP 191
>04_04_0376 +
24809804-24809888,24810575-24810703,24810797-24811020,
24811398-24811607,24811697-24811789,24811899-24811937,
24812041-24812130,24812214-24812316,24812388-24812468,
24812929-24813005,24813156-24813236,24814165-24814256,
24814536-24814662
Length = 476
Score = 42.3 bits (95), Expect = 8e-04
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 474 DVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
DV EC K G + + V +N H G + +KF+ +D + +N RWFGG + A
Sbjct: 389 DVREECM-KLGPVDNVKVCEN---HPEGVILVKFKDRKDGIKCIEKMNGRWFGGNQIQA 443
>09_01_0079 -
1159963-1160211,1160303-1160509,1160631-1160801,
1161732-1161869,1162184-1162273,1162354-1162431,
1162510-1163166,1163245-1163363,1164305-1164584
Length = 662
Score = 36.7 bits (81), Expect = 0.039
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +3
Query: 459 DNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGR 638
D+ +D E +YG I V + G+ + F+ EDA A+ ++N++ G +
Sbjct: 331 DSVDDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMNSKMVGSK 390
Query: 639 PVYAELSPVTDSRE 680
P+Y L+ + R+
Sbjct: 391 PLYVALAQRKEDRK 404
>11_06_0418 -
23317077-23317343,23317614-23317787,23317886-23317971,
23318125-23318244,23318338-23318368,23318457-23318532,
23318672-23318759,23318877-23318938,23319041-23319117,
23319890-23319992,23320237-23320298,23321116-23321289,
23322160-23322405
Length = 521
Score = 35.5 bits (78), Expect = 0.090
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 567 IKFRREEDAXXAVNDLNNRWFGGRPV 644
+ FR ++DA A+N+LN +W G R V
Sbjct: 290 VSFRNQQDAQNAINELNGKWLGNRQV 315
>01_05_0166 + 18844468-18845184,18847394-18847690
Length = 337
Score = 35.1 bits (77), Expect = 0.12
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +3
Query: 459 DNFCEDVXVECEDKYGEIXEMNVXD----NLGDHXXGNVXIKFRREEDAXXAVNDLNNRW 626
D E+V EC KYG + + + + + + I F R E+A A+ DL R+
Sbjct: 247 DELEEEVASECS-KYGTVLRVLIFEITQADFPAEEAVRIFILFERAEEATKAMIDLEGRF 305
Query: 627 FGGRPVYA 650
FGGR V A
Sbjct: 306 FGGRVVRA 313
>08_02_0162 +
13464698-13464974,13465719-13465837,13465920-13466579,
13466686-13466763,13466849-13466938,13467241-13467378,
13467730-13467738
Length = 456
Score = 33.5 bits (73), Expect = 0.36
Identities = 23/101 (22%), Positives = 44/101 (43%)
Frame = +3
Query: 375 NPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXX 554
N + A G++L + N+ D D +++ + +G I V +L
Sbjct: 310 NIKEAADKNQGTNLYLKNLDDSIDD---DEKLKEIFAD----FGTITSCKVMRDLNGVSK 362
Query: 555 GNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSR 677
G+ + F+ EDA A+ +N + G +P+Y L+ + R
Sbjct: 363 GSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQRKEER 403
>01_01_0769 -
5944910-5946613,5946768-5946887,5948243-5948300,
5948544-5948627,5949356-5949456,5949562-5949745,
5950746-5950774,5951134-5951226
Length = 790
Score = 31.5 bits (68), Expect = 1.5
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Frame = +3
Query: 498 KYGEIXEMNVXDNLGDHXX----GNVXIKFRREEDAXXAVNDLNNRWFGGRPV-YAELSP 662
+YG+I E + DN+G + G V + F REE+A + +N GRP+ +AE
Sbjct: 112 QYGKI-ESIIIDNIGANQQIPDSGRVYVTFSREEEAFRCIEAVNGFILDGRPLKFAESQS 170
Query: 663 V 665
V
Sbjct: 171 V 171
>03_03_0042 +
14009649-14009866,14011342-14011419,14011791-14011955,
14012071-14012138,14012219-14012258,14013579-14013690,
14013859-14013942
Length = 254
Score = 31.1 bits (67), Expect = 1.9
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXX-GNVXIKFRREEDAXXAVNDLNNRWFGGRPV 644
ED+ + E ++G + ++ + N G +KFR EDA A +LN++ GGR +
Sbjct: 75 EDIRIPFE-QFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQELNHQVIGGREI 132
>03_02_0555 +
9431451-9431688,9432685-9432803,9432886-9433079,
9433174-9433430,9433544-9433650,9433715-9433888,
9434359-9434490,9434776-9434955,9435062-9435265
Length = 534
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 498 KYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVY 647
K+G+I V N G ++F +E A ++ +LNN F GR ++
Sbjct: 136 KFGDILSCKVAKNEDGTSRGYGFVQFALQESADASIQNLNNSHFCGRQLH 185
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 31.1 bits (67), Expect = 1.9
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +3
Query: 414 LVVANVSDEXMQEHYD---NFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRRE 584
L++ N+ D ++ D + +DV EC K+G++ + V N G V ++F
Sbjct: 476 LLLKNMFDPSVETDPDFDLDIKDDVQEECS-KFGQVKHIFVDKNTS----GFVYLRFDSI 530
Query: 585 EDAXXAVNDLNNRWFGGRPVYAE-LSP 662
A A L+ RWF G+ + A +SP
Sbjct: 531 TAAMSAQKALHGRWFAGKMITATFMSP 557
>02_05_1332 + 35758657-35758728,35758959-35760689
Length = 600
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 242 GTEKDXVXCSXYFXIGACRHGDRCSRIH 325
GT K V C YF G C GDRC+ +H
Sbjct: 60 GTAKQGVPC-YYFQKGMCVKGDRCAFLH 86
>06_03_0614 -
22753092-22753349,22754059-22754277,22754712-22754960,
22755186-22755275,22755379-22755456,22755562-22756337,
22757042-22757384
Length = 670
Score = 30.7 bits (66), Expect = 2.6
Identities = 21/90 (23%), Positives = 38/90 (42%)
Frame = +3
Query: 411 HLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREED 590
+L + N+ D+ EH EC +GE+ V + G + F ED
Sbjct: 344 NLYLKNLDDDINDEHLRKL-----FEC---FGEVASCKVMLDSHGRSKGCGFVSFATVED 395
Query: 591 AXXAVNDLNNRWFGGRPVYAELSPVTDSRE 680
A A+ +N + G +P+Y ++ + R+
Sbjct: 396 ANNAILKMNGKMVGKKPLYVAVAQRKEERK 425
>01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,
8561377-8561642,8561967-8562111,8562411-8562530,
8562611-8562930,8564161-8564341,8564434-8564580,
8565186-8565497,8566303-8566450,8566592-8566765,
8567385-8567446,8567499-8567571,8567628-8567683,
8568370-8568645,8569541-8569588,8569870-8569991,
8570258-8570413,8571037-8571079,8572624-8572701,
8572972-8573070,8573168-8573209,8573302-8573304
Length = 1264
Score = 30.7 bits (66), Expect = 2.6
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +2
Query: 266 CSXYFXIGACRHGDRCSRIHNKPTFVSDCITTKLVCKSTKXCEI 397
C + + CR+G+ CS H+ + VS IT+ + + + +
Sbjct: 1013 CKFFLTLQGCRNGNSCSFSHDSGSLVSSSITSGICSQENRATSV 1056
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,928,461
Number of Sequences: 37544
Number of extensions: 300367
Number of successful extensions: 736
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3934202376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -