Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_B02
(1269 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ627978-1|CAF29556.1| 240|Homo sapiens U2 snRNP auxiliary fact... 208 3e-53
M96982-1|AAA36619.1| 240|Homo sapiens U2 snRNP auxiliary factor... 198 3e-50
BC001923-1|AAH01923.1| 240|Homo sapiens U2 small nuclear RNA au... 198 3e-50
BC001177-1|AAH01177.1| 240|Homo sapiens U2 small nuclear RNA au... 198 3e-50
AP001748-2|BAA95534.1| 240|Homo sapiens U2 snRNP auxiliary fact... 198 3e-50
BC005915-1|AAH05915.1| 167|Homo sapiens U2 small nuclear RNA au... 168 4e-41
AY569437-1|AAT72770.3| 181|Homo sapiens U2 small nuclear RNA au... 143 1e-33
BC021186-1|AAH21186.1| 202|Homo sapiens U2 small nuclear RNA au... 91 1e-17
U51224-1|AAA98669.1| 479|Homo sapiens U2AFBPL protein. 66 2e-10
D49677-1|BAA08533.1| 482|Homo sapiens U2AF1-RS2 protein. 66 2e-10
D49676-1|BAA08532.1| 479|Homo sapiens U2AF1-RS1 protein. 66 2e-10
BC113599-1|AAI13600.1| 479|Homo sapiens ZRSR1 protein protein. 66 2e-10
BC113480-1|AAI13481.1| 482|Homo sapiens zinc finger (CCCH type)... 66 2e-10
BC113454-1|AAI13455.1| 482|Homo sapiens zinc finger (CCCH type)... 66 2e-10
BC104811-1|AAI04812.1| 479|Homo sapiens ZRSR1 protein protein. 66 2e-10
BC050451-1|AAH50451.2| 482|Homo sapiens zinc finger (CCCH type)... 66 2e-10
Z97632-4|CAB10730.1| 755|Homo sapiens HIV-1 Tat specific factor... 48 1e-04
U76992-1|AAB18823.1| 754|Homo sapiens Tat-SF1 protein. 48 1e-04
BT006886-1|AAP35532.1| 755|Homo sapiens HIV TAT specific factor... 48 1e-04
BC009896-1|AAH09896.1| 755|Homo sapiens HIV-1 Tat specific fact... 48 1e-04
AB209303-1|BAD92540.1| 758|Homo sapiens HIV TAT specific factor... 48 1e-04
BC039322-1|AAH39322.1| 401|Homo sapiens RBM17 protein protein. 42 0.006
BC009064-1|AAH09064.1| 369|Homo sapiens RBM17 protein protein. 42 0.006
BC007871-1|AAH07871.1| 401|Homo sapiens RNA binding motif prote... 42 0.006
AL157395-8|CAH73602.1| 401|Homo sapiens RNA binding motif prote... 42 0.006
AF542550-1|AAQ09533.1| 401|Homo sapiens unknown protein. 42 0.006
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 38 0.078
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 38 0.078
BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein pr... 38 0.078
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 38 0.078
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 38 0.078
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 38 0.078
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 38 0.078
BC014917-1|AAH14917.1| 314|Homo sapiens UHMK1 protein protein. 37 0.14
AL359699-2|CAH70392.1| 419|Homo sapiens U2AF homology motif (UH... 37 0.14
AJ536197-1|CAD60192.1| 419|Homo sapiens KIS protein protein. 37 0.14
U41315-1|AAA99070.1| 485|Homo sapiens ZNF127-Xp protein. 36 0.41
BC064838-1|AAH64838.1| 482|Homo sapiens makorin, ring finger pr... 35 0.55
BC037400-1|AAH37400.1| 482|Homo sapiens makorin, ring finger pr... 35 0.55
BC025955-1|AAH25955.1| 482|Homo sapiens makorin, ring finger pr... 35 0.55
AM236048-1|CAJ84705.1| 329|Homo sapiens makorin-1 protein. 35 0.55
AF192793-1|AAF18979.1| 482|Homo sapiens makorin 1 protein. 35 0.55
AF192784-1|AAF17487.1| 482|Homo sapiens makorin 1 protein. 35 0.55
AF117233-1|AAF17214.1| 328|Homo sapiens znf-xp protein protein. 35 0.55
AB209298-1|BAD92535.1| 409|Homo sapiens makorin, ring finger pr... 35 0.55
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 34 1.3
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 34 1.3
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 34 1.3
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 34 1.3
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 34 1.3
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 34 1.3
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 34 1.3
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 34 1.3
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 34 1.3
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 33 1.7
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 33 1.7
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 33 2.2
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 33 2.2
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 33 2.2
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 33 2.2
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 33 2.2
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 33 2.9
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 33 2.9
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 33 2.9
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 33 2.9
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 33 2.9
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 32 5.1
D63484-1|BAA09771.1| 944|Homo sapiens KIAA0150 protein. 31 8.9
BC038670-1|AAH38670.1| 948|Homo sapiens zinc finger CCCH-type c... 31 8.9
BC034435-1|AAH34435.1| 335|Homo sapiens ZC3H3 protein protein. 31 8.9
BC001974-1|AAH01974.1| 498|Homo sapiens Unknown (protein for IM... 31 8.9
>AJ627978-1|CAF29556.1| 240|Homo sapiens U2 snRNP auxiliary factor
small subunit protein.
Length = 240
Score = 208 bits (508), Expect = 3e-53
Identities = 103/172 (59%), Positives = 115/172 (66%)
Frame = +3
Query: 342 SQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEM 521
SQT+L+QN+Y NPQN A++ADGSH V SD MQEHYD F E+V E E+KYGE+ EM
Sbjct: 43 SQTILIQNIYRNPQNSAQTADGSHCAV---SDVEMQEHYDEFFEEVFTEMEEKYGEVEEM 99
Query: 522 NVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQYE 701
NV DNLGDH GNV +KFRREEDA AV DLNNRWF G+P++AELSPVTD RE CCRQYE
Sbjct: 100 NVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYE 159
Query: 702 MGECTXSGCGYFMXLKPIS*XLXXYXXXXXXXXXXXXXXXXXRRXRXRSRER 857
MGECT G FM LKPIS L RR R R R R
Sbjct: 160 MGECTRGGFCNFMHLKPISRELRRELYGRRRKKHRSRSRSRERRSRSRDRGR 211
Score = 81.0 bits (191), Expect = 8e-15
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = +2
Query: 218 AEYLAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKPTF 340
AEYLA+I GTEKD V CS YF IGACRHGDRCSR+HNKPTF
Sbjct: 2 AEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTF 42
>M96982-1|AAA36619.1| 240|Homo sapiens U2 snRNP auxiliary factor
small subunit protein.
Length = 240
Score = 198 bits (484), Expect = 3e-50
Identities = 100/172 (58%), Positives = 111/172 (64%)
Frame = +3
Query: 342 SQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEM 521
SQT+ L N+Y NPQN ++SADG V SD MQEHYD F E+V E E+KYGE+ EM
Sbjct: 43 SQTIALLNIYRNPQNSSQSADGLRCAV---SDVEMQEHYDEFFEEVFTEMEEKYGEVEEM 99
Query: 522 NVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQYE 701
NV DNLGDH GNV +KFRREEDA AV DLNNRWF G+P++AELSPVTD RE CCRQYE
Sbjct: 100 NVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYE 159
Query: 702 MGECTXSGCGYFMXLKPIS*XLXXYXXXXXXXXXXXXXXXXXRRXRXRSRER 857
MGECT G FM LKPIS L RR R R R R
Sbjct: 160 MGECTRGGFCNFMHLKPISRELRRELYGRRRKKHRSRSRSRERRSRSRDRGR 211
Score = 81.0 bits (191), Expect = 8e-15
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = +2
Query: 218 AEYLAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKPTF 340
AEYLA+I GTEKD V CS YF IGACRHGDRCSR+HNKPTF
Sbjct: 2 AEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTF 42
>BC001923-1|AAH01923.1| 240|Homo sapiens U2 small nuclear RNA
auxiliary factor 1 protein.
Length = 240
Score = 198 bits (484), Expect = 3e-50
Identities = 100/172 (58%), Positives = 111/172 (64%)
Frame = +3
Query: 342 SQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEM 521
SQT+ L N+Y NPQN ++SADG V SD MQEHYD F E+V E E+KYGE+ EM
Sbjct: 43 SQTIALLNIYRNPQNSSQSADGLRCAV---SDVEMQEHYDEFFEEVFTEMEEKYGEVEEM 99
Query: 522 NVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQYE 701
NV DNLGDH GNV +KFRREEDA AV DLNNRWF G+P++AELSPVTD RE CCRQYE
Sbjct: 100 NVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYE 159
Query: 702 MGECTXSGCGYFMXLKPIS*XLXXYXXXXXXXXXXXXXXXXXRRXRXRSRER 857
MGECT G FM LKPIS L RR R R R R
Sbjct: 160 MGECTRGGFCNFMHLKPISRELRRELYGRRRKKHRSRSRSRERRSRSRDRGR 211
Score = 81.0 bits (191), Expect = 8e-15
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = +2
Query: 218 AEYLAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKPTF 340
AEYLA+I GTEKD V CS YF IGACRHGDRCSR+HNKPTF
Sbjct: 2 AEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTF 42
>BC001177-1|AAH01177.1| 240|Homo sapiens U2 small nuclear RNA
auxiliary factor 1 protein.
Length = 240
Score = 198 bits (484), Expect = 3e-50
Identities = 100/172 (58%), Positives = 111/172 (64%)
Frame = +3
Query: 342 SQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEM 521
SQT+ L N+Y NPQN ++SADG V SD MQEHYD F E+V E E+KYGE+ EM
Sbjct: 43 SQTIALLNIYRNPQNSSQSADGLRCAV---SDVEMQEHYDEFFEEVFTEMEEKYGEVEEM 99
Query: 522 NVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQYE 701
NV DNLGDH GNV +KFRREEDA AV DLNNRWF G+P++AELSPVTD RE CCRQYE
Sbjct: 100 NVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYE 159
Query: 702 MGECTXSGCGYFMXLKPIS*XLXXYXXXXXXXXXXXXXXXXXRRXRXRSRER 857
MGECT G FM LKPIS L RR R R R R
Sbjct: 160 MGECTRGGFCNFMHLKPISRELRRELYGRRRKKHRSRSRSRERRSRSRDRGR 211
Score = 81.0 bits (191), Expect = 8e-15
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = +2
Query: 218 AEYLAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKPTF 340
AEYLA+I GTEKD V CS YF IGACRHGDRCSR+HNKPTF
Sbjct: 2 AEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTF 42
>AP001748-2|BAA95534.1| 240|Homo sapiens U2 snRNP auxiliary factor
small subunit protein.
Length = 240
Score = 198 bits (484), Expect = 3e-50
Identities = 100/172 (58%), Positives = 111/172 (64%)
Frame = +3
Query: 342 SQTVLLQNLYVNPQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEM 521
SQT+ L N+Y NPQN ++SADG V SD MQEHYD F E+V E E+KYGE+ EM
Sbjct: 43 SQTIALLNIYRNPQNSSQSADGLRCAV---SDVEMQEHYDEFFEEVFTEMEEKYGEVEEM 99
Query: 522 NVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSREXCCRQYE 701
NV DNLGDH GNV +KFRREEDA AV DLNNRWF G+P++AELSPVTD RE CCRQYE
Sbjct: 100 NVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYE 159
Query: 702 MGECTXSGCGYFMXLKPIS*XLXXYXXXXXXXXXXXXXXXXXRRXRXRSRER 857
MGECT G FM LKPIS L RR R R R R
Sbjct: 160 MGECTRGGFCNFMHLKPISRELRRELYGRRRKKHRSRSRSRERRSRSRDRGR 211
Score = 81.0 bits (191), Expect = 8e-15
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = +2
Query: 218 AEYLAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKPTF 340
AEYLA+I GTEKD V CS YF IGACRHGDRCSR+HNKPTF
Sbjct: 2 AEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTF 42
>BC005915-1|AAH05915.1| 167|Homo sapiens U2 small nuclear RNA
auxiliary factor 1 protein.
Length = 167
Score = 168 bits (408), Expect = 4e-41
Identities = 82/138 (59%), Positives = 89/138 (64%)
Frame = +3
Query: 444 MQEHYDNFCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNR 623
MQEHYD F E+V E E+KY E+ EMNV DNLGDH GNV +KFRREEDA AV DLNNR
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYREVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 60
Query: 624 WFGGRPVYAELSPVTDSREXCCRQYEMGECTXSGCGYFMXLKPIS*XLXXYXXXXXXXXX 803
WF G+P++AELSPVTD RE CCRQYEMGECT G FM LKPIS L
Sbjct: 61 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKKH 120
Query: 804 XXXXXXXXRRXRXRSRER 857
RR R R R R
Sbjct: 121 RSRSRSRERRSRSRDRGR 138
>AY569437-1|AAT72770.3| 181|Homo sapiens U2 small nuclear RNA
auxiliary factor 1-like 3 splicing variant 1 protein.
Length = 181
Score = 143 bits (346), Expect = 1e-33
Identities = 64/98 (65%), Positives = 74/98 (75%)
Frame = +3
Query: 465 FCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPV 644
F ++V E ++KYGEI EMNV DNLGDH GNV +KFRREED AV +L+NRWF G+ V
Sbjct: 42 FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELSNRWFNGQAV 101
Query: 645 YAELSPVTDSREXCCRQYEMGECTXSGCGYFMXLKPIS 758
+ ELSPVTD RE CCRQYEMGECT G FM L+PIS
Sbjct: 102 HGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPIS 139
Score = 81.0 bits (191), Expect = 8e-15
Identities = 34/47 (72%), Positives = 37/47 (78%)
Frame = +2
Query: 218 AEYLAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKPTFVSDCIT 358
AEYLA+I GTEKD V CS YF IG CRHGDRCSR+HNKPTF + T
Sbjct: 2 AEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFSQEVFT 48
>BC021186-1|AAH21186.1| 202|Homo sapiens U2 small nuclear RNA
auxiliary factor 1-like 4 protein.
Length = 202
Score = 90.6 bits (215), Expect = 1e-17
Identities = 39/75 (52%), Positives = 50/75 (66%)
Frame = +3
Query: 465 FCEDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPV 644
F ++V E ++KYGEI EMNV DNLGDH GNV +KFRREED AV +L+NRWF G+ V
Sbjct: 42 FSQEVFTELQEKYGEIEEMNVCDNLGDHVVGNVYVKFRREEDGERAVAELSNRWFNGQAV 101
Query: 645 YAELSPVTDSREXCC 689
+ + V + C
Sbjct: 102 HGNVPEVASATSCIC 116
Score = 81.0 bits (191), Expect = 8e-15
Identities = 34/47 (72%), Positives = 37/47 (78%)
Frame = +2
Query: 218 AEYLAAIXGTEKDXVXCSXYFXIGACRHGDRCSRIHNKPTFVSDCIT 358
AEYLA+I GTEKD V CS YF IG CRHGDRCSR+HNKPTF + T
Sbjct: 2 AEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFSQEVFT 48
>U51224-1|AAA98669.1| 479|Homo sapiens U2AFBPL protein.
Length = 479
Score = 66.5 bits (155), Expect = 2e-10
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Frame = +3
Query: 315 HAFITSQPLSQTVLLQNLYVN-PQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVEC 491
H F TS P T+L+++++ + D S+E + + +F EDV E
Sbjct: 196 HNFPTSSP---TLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEF 252
Query: 492 EDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTD 671
++ G++ + V NL H GNV ++++ EE+ A++ N RW+ GR + E PVT
Sbjct: 253 KN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTR 311
Query: 672 SREXCCRQYEMGEC 713
+ C +E+ +C
Sbjct: 312 WKMAICGLFEIQQC 325
Score = 45.2 bits (102), Expect = 5e-04
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = +2
Query: 248 EKDXVXCSXYFXIGACRHGDRCSRIHNKPT 337
EKD C Y GACR GDRCSR HN PT
Sbjct: 171 EKDRANCPFYSKTGACRFGDRCSRKHNFPT 200
>D49677-1|BAA08533.1| 482|Homo sapiens U2AF1-RS2 protein.
Length = 482
Score = 66.5 bits (155), Expect = 2e-10
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Frame = +3
Query: 315 HAFITSQPLSQTVLLQNLYVN-PQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVEC 491
H F TS P T+L+++++ + D S+E + + +F EDV E
Sbjct: 191 HNFPTSSP---TLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEF 247
Query: 492 EDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTD 671
++ G++ + V NL H GNV ++++ EE+ A++ N RW+ GR + E PVT
Sbjct: 248 KN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTR 306
Query: 672 SREXCCRQYEMGEC 713
+ C +E+ +C
Sbjct: 307 WKMAICGLFEIQQC 320
Score = 45.2 bits (102), Expect = 5e-04
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = +2
Query: 248 EKDXVXCSXYFXIGACRHGDRCSRIHNKPT 337
EKD C Y GACR GDRCSR HN PT
Sbjct: 166 EKDRANCPFYSKTGACRFGDRCSRKHNFPT 195
>D49676-1|BAA08532.1| 479|Homo sapiens U2AF1-RS1 protein.
Length = 479
Score = 66.5 bits (155), Expect = 2e-10
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Frame = +3
Query: 315 HAFITSQPLSQTVLLQNLYVN-PQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVEC 491
H F TS P T+L+++++ + D S+E + + +F EDV E
Sbjct: 196 HNFPTSSP---TLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEF 252
Query: 492 EDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTD 671
++ G++ + V NL H GNV ++++ EE+ A++ N RW+ GR + E PVT
Sbjct: 253 KN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTR 311
Query: 672 SREXCCRQYEMGEC 713
+ C +E+ +C
Sbjct: 312 WKMAICGLFEIQQC 325
Score = 45.2 bits (102), Expect = 5e-04
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = +2
Query: 248 EKDXVXCSXYFXIGACRHGDRCSRIHNKPT 337
EKD C Y GACR GDRCSR HN PT
Sbjct: 171 EKDRANCPFYSKTGACRFGDRCSRKHNFPT 200
>BC113599-1|AAI13600.1| 479|Homo sapiens ZRSR1 protein protein.
Length = 479
Score = 66.5 bits (155), Expect = 2e-10
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Frame = +3
Query: 315 HAFITSQPLSQTVLLQNLYVN-PQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVEC 491
H F TS P T+L+++++ + D S+E + + +F EDV E
Sbjct: 196 HNFPTSSP---TLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEF 252
Query: 492 EDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTD 671
++ G++ + V NL H GNV ++++ EE+ A++ N RW+ GR + E PVT
Sbjct: 253 KN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTR 311
Query: 672 SREXCCRQYEMGEC 713
+ C +E+ +C
Sbjct: 312 WKMAICGLFEIQQC 325
Score = 45.2 bits (102), Expect = 5e-04
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = +2
Query: 248 EKDXVXCSXYFXIGACRHGDRCSRIHNKPT 337
EKD C Y GACR GDRCSR HN PT
Sbjct: 171 EKDRANCPFYSKTGACRFGDRCSRKHNFPT 200
>BC113480-1|AAI13481.1| 482|Homo sapiens zinc finger (CCCH type),
RNA-binding motif and serine/arginine rich 2 protein.
Length = 482
Score = 66.5 bits (155), Expect = 2e-10
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Frame = +3
Query: 315 HAFITSQPLSQTVLLQNLYVN-PQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVEC 491
H F TS P T+L+++++ + D S+E + + +F EDV E
Sbjct: 191 HNFPTSSP---TLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEF 247
Query: 492 EDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTD 671
++ G++ + V NL H GNV ++++ EE+ A++ N RW+ GR + E PVT
Sbjct: 248 KN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTR 306
Query: 672 SREXCCRQYEMGEC 713
+ C +E+ +C
Sbjct: 307 WKMAICGLFEIQQC 320
Score = 45.2 bits (102), Expect = 5e-04
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = +2
Query: 248 EKDXVXCSXYFXIGACRHGDRCSRIHNKPT 337
EKD C Y GACR GDRCSR HN PT
Sbjct: 166 EKDRANCPFYSKTGACRFGDRCSRKHNFPT 195
>BC113454-1|AAI13455.1| 482|Homo sapiens zinc finger (CCCH type),
RNA-binding motif and serine/arginine rich 2 protein.
Length = 482
Score = 66.5 bits (155), Expect = 2e-10
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Frame = +3
Query: 315 HAFITSQPLSQTVLLQNLYVN-PQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVEC 491
H F TS P T+L+++++ + D S+E + + +F EDV E
Sbjct: 191 HNFPTSSP---TLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEF 247
Query: 492 EDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTD 671
++ G++ + V NL H GNV ++++ EE+ A++ N RW+ GR + E PVT
Sbjct: 248 KN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTR 306
Query: 672 SREXCCRQYEMGEC 713
+ C +E+ +C
Sbjct: 307 WKMAICGLFEIQQC 320
Score = 45.2 bits (102), Expect = 5e-04
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = +2
Query: 248 EKDXVXCSXYFXIGACRHGDRCSRIHNKPT 337
EKD C Y GACR GDRCSR HN PT
Sbjct: 166 EKDRANCPFYSKTGACRFGDRCSRKHNFPT 195
>BC104811-1|AAI04812.1| 479|Homo sapiens ZRSR1 protein protein.
Length = 479
Score = 66.5 bits (155), Expect = 2e-10
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Frame = +3
Query: 315 HAFITSQPLSQTVLLQNLYVN-PQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVEC 491
H F TS P T+L+++++ + D S+E + + +F EDV E
Sbjct: 196 HNFPTSSP---TLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEF 252
Query: 492 EDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTD 671
++ G++ + V NL H GNV ++++ EE+ A++ N RW+ GR + E PVT
Sbjct: 253 KN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTR 311
Query: 672 SREXCCRQYEMGEC 713
+ C +E+ +C
Sbjct: 312 WKMAICGLFEIQQC 325
Score = 45.2 bits (102), Expect = 5e-04
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = +2
Query: 248 EKDXVXCSXYFXIGACRHGDRCSRIHNKPT 337
EKD C Y GACR GDRCSR HN PT
Sbjct: 171 EKDRANCPFYSKTGACRFGDRCSRKHNFPT 200
>BC050451-1|AAH50451.2| 482|Homo sapiens zinc finger (CCCH type),
RNA-binding motif and serine/arginine rich 2 protein.
Length = 482
Score = 66.5 bits (155), Expect = 2e-10
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Frame = +3
Query: 315 HAFITSQPLSQTVLLQNLYVN-PQNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVEC 491
H F TS P T+L+++++ + D S+E + + +F EDV E
Sbjct: 191 HNFPTSSP---TLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEF 247
Query: 492 EDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTD 671
++ G++ + V NL H GNV ++++ EE+ A++ N RW+ GR + E PVT
Sbjct: 248 KN-VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTR 306
Query: 672 SREXCCRQYEMGEC 713
+ C +E+ +C
Sbjct: 307 WKMAICGLFEIQQC 320
Score = 45.2 bits (102), Expect = 5e-04
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = +2
Query: 248 EKDXVXCSXYFXIGACRHGDRCSRIHNKPT 337
EKD C Y GACR GDRCSR HN PT
Sbjct: 166 EKDRANCPFYSKTGACRFGDRCSRKHNFPT 195
>Z97632-4|CAB10730.1| 755|Homo sapiens HIV-1 Tat specific factor 1
protein.
Length = 755
Score = 47.6 bits (108), Expect = 1e-04
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
ED+ VEC K+G+I ++ + D H G + FR E+A + L+ RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 651 E 653
+
Sbjct: 345 Q 345
>U76992-1|AAB18823.1| 754|Homo sapiens Tat-SF1 protein.
Length = 754
Score = 47.6 bits (108), Expect = 1e-04
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
ED+ VEC K+G+I ++ + D H G + FR E+A + L+ RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 651 E 653
+
Sbjct: 345 Q 345
>BT006886-1|AAP35532.1| 755|Homo sapiens HIV TAT specific factor 1
protein.
Length = 755
Score = 47.6 bits (108), Expect = 1e-04
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
ED+ VEC K+G+I ++ + D H G + FR E+A + L+ RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 651 E 653
+
Sbjct: 345 Q 345
>BC009896-1|AAH09896.1| 755|Homo sapiens HIV-1 Tat specific factor
1 protein.
Length = 755
Score = 47.6 bits (108), Expect = 1e-04
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
ED+ VEC K+G+I ++ + D H G + FR E+A + L+ RWFGGR + A
Sbjct: 289 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 344
Query: 651 E 653
+
Sbjct: 345 Q 345
>AB209303-1|BAD92540.1| 758|Homo sapiens HIV TAT specific factor 1
variant protein.
Length = 758
Score = 47.6 bits (108), Expect = 1e-04
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
ED+ VEC K+G+I ++ + D H G + FR E+A + L+ RWFGGR + A
Sbjct: 292 EDLRVECS-KFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITA 347
Query: 651 E 653
+
Sbjct: 348 Q 348
>BC039322-1|AAH39322.1| 401|Homo sapiens RBM17 protein protein.
Length = 401
Score = 41.5 bits (93), Expect = 0.006
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +3
Query: 486 ECEDKYGEIXEMNVXDNLG--DHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
ECE KYG++ + + + G D + ++F R E A AV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKA 384
>BC009064-1|AAH09064.1| 369|Homo sapiens RBM17 protein protein.
Length = 369
Score = 41.5 bits (93), Expect = 0.006
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +3
Query: 486 ECEDKYGEIXEMNVXDNLG--DHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
ECE KYG++ + + + G D + ++F R E A AV DLN R+FGGR V A
Sbjct: 297 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKA 352
>BC007871-1|AAH07871.1| 401|Homo sapiens RNA binding motif protein
17 protein.
Length = 401
Score = 41.5 bits (93), Expect = 0.006
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +3
Query: 486 ECEDKYGEIXEMNVXDNLG--DHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
ECE KYG++ + + + G D + ++F R E A AV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKA 384
>AL157395-8|CAH73602.1| 401|Homo sapiens RNA binding motif protein
17 protein.
Length = 401
Score = 41.5 bits (93), Expect = 0.006
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +3
Query: 486 ECEDKYGEIXEMNVXDNLG--DHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
ECE KYG++ + + + G D + ++F R E A AV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKA 384
>AF542550-1|AAQ09533.1| 401|Homo sapiens unknown protein.
Length = 401
Score = 41.5 bits (93), Expect = 0.006
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +3
Query: 486 ECEDKYGEIXEMNVXDNLG--DHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
ECE KYG++ + + + G D + ++F R E A AV DLN R+FGGR V A
Sbjct: 329 ECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKA 384
>L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein.
Length = 530
Score = 37.9 bits (84), Expect = 0.078
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
+DV EC +K+G + + V N GNV +K A AVN L+ RWF G+ + A
Sbjct: 448 DDVIEEC-NKHGGVIHIYVDKNSAQ---GNVYVKCPSIAAAIAAVNALHGRWFAGKMITA 503
Query: 651 ELSPV 665
P+
Sbjct: 504 AYVPL 508
>L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein.
Length = 524
Score = 37.9 bits (84), Expect = 0.078
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
+DV EC +K+G + + V N GNV +K A AVN L+ RWF G+ + A
Sbjct: 442 DDVIEEC-NKHGGVIHIYVDKNSAQ---GNVYVKCPSIAAAIAAVNALHGRWFAGKMITA 497
Query: 651 ELSPV 665
P+
Sbjct: 498 AYVPL 502
>BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 37.9 bits (84), Expect = 0.078
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
+DV EC +K+G + + V N GNV +K A AVN L+ RWF G+ + A
Sbjct: 291 DDVIEEC-NKHGGVIHIYVDKNSAQ---GNVYVKCPSIAAAIAAVNALHGRWFAGKMITA 346
Query: 651 ELSPV 665
P+
Sbjct: 347 AYVPL 351
>BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 37.9 bits (84), Expect = 0.078
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
+DV EC +K+G + + V N GNV +K A AVN L+ RWF G+ + A
Sbjct: 448 DDVIEEC-NKHGGVIHIYVDKNSAQ---GNVYVKCPSIAAAIAAVNALHGRWFAGKMITA 503
Query: 651 ELSPV 665
P+
Sbjct: 504 AYVPL 508
>BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein.
Length = 508
Score = 37.9 bits (84), Expect = 0.078
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
+DV EC +K+G + + V N GNV +K A AVN L+ RWF G+ + A
Sbjct: 426 DDVIEEC-NKHGGVIHIYVDKNSAQ---GNVYVKCPSIAAAIAAVNALHGRWFAGKMITA 481
Query: 651 ELSPV 665
P+
Sbjct: 482 AYVPL 486
>AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif protein
39 protein.
Length = 524
Score = 37.9 bits (84), Expect = 0.078
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
+DV EC +K+G + + V N GNV +K A AVN L+ RWF G+ + A
Sbjct: 442 DDVIEEC-NKHGGVIHIYVDKNSAQ---GNVYVKCPSIAAAIAAVNALHGRWFAGKMITA 497
Query: 651 ELSPV 665
P+
Sbjct: 498 AYVPL 502
>AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 37.9 bits (84), Expect = 0.078
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +3
Query: 471 EDVXVECEDKYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYA 650
+DV EC +K+G + + V N GNV +K A AVN L+ RWF G+ + A
Sbjct: 448 DDVIEEC-NKHGGVIHIYVDKNSAQ---GNVYVKCPSIAAAIAAVNALHGRWFAGKMITA 503
Query: 651 ELSPV 665
P+
Sbjct: 504 AYVPL 508
>BC014917-1|AAH14917.1| 314|Homo sapiens UHMK1 protein protein.
Length = 314
Score = 37.1 bits (82), Expect = 0.14
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 447 QEHYDNFCEDVXVECEDKYGEIXEMNV-XDNLGDHXXGNVXIKFRREEDAXXAVNDLNNR 623
+E Y++ EDV EC+ KYG + + V +N G G V +++ D+ A L R
Sbjct: 232 EEEYEDVVEDVKEECQ-KYGPVVSLLVPKENPG---RGQVFVEYANAGDSKAAQKLLTGR 287
Query: 624 WFGGRPVYAELSPVT 668
F G+ V A P++
Sbjct: 288 MFDGKFVVATFYPLS 302
>AL359699-2|CAH70392.1| 419|Homo sapiens U2AF homology motif (UHM)
kinase 1 protein.
Length = 419
Score = 37.1 bits (82), Expect = 0.14
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 447 QEHYDNFCEDVXVECEDKYGEIXEMNV-XDNLGDHXXGNVXIKFRREEDAXXAVNDLNNR 623
+E Y++ EDV EC+ KYG + + V +N G G V +++ D+ A L R
Sbjct: 337 EEEYEDVVEDVKEECQ-KYGPVVSLLVPKENPG---RGQVFVEYANAGDSKAAQKLLTGR 392
Query: 624 WFGGRPVYAELSPVT 668
F G+ V A P++
Sbjct: 393 MFDGKFVVATFYPLS 407
>AJ536197-1|CAD60192.1| 419|Homo sapiens KIS protein protein.
Length = 419
Score = 37.1 bits (82), Expect = 0.14
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 447 QEHYDNFCEDVXVECEDKYGEIXEMNV-XDNLGDHXXGNVXIKFRREEDAXXAVNDLNNR 623
+E Y++ EDV EC+ KYG + + V +N G G V +++ D+ A L R
Sbjct: 337 EEEYEDVVEDVKEECQ-KYGPVVSLLVPKENPG---RGQVFVEYANAGDSKAAQKLLTGR 392
Query: 624 WFGGRPVYAELSPVT 668
F G+ V A P++
Sbjct: 393 MFDGKFVVATFYPLS 407
>U41315-1|AAA99070.1| 485|Homo sapiens ZNF127-Xp protein.
Length = 485
Score = 35.5 bits (78), Expect = 0.41
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 260 VXCSXYFXIGACRHGDRCSRIHNKPTFVSDCITTKLVCKST 382
V C YF G C +GDRC H+KP + T+L KS+
Sbjct: 123 VVCK-YFQRGCCVYGDRCRCEHSKPLKQEEATATELTTKSS 162
>BC064838-1|AAH64838.1| 482|Homo sapiens makorin, ring finger
protein, 1 protein.
Length = 482
Score = 35.1 bits (77), Expect = 0.55
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 260 VXCSXYFXIGACRHGDRCSRIHNKPTFVSDCITTKLVCKST 382
V C YF G C +GDRC H+KP + T+L KS+
Sbjct: 88 VVCK-YFQRGYCIYGDRCRYEHSKPLKQEEATATELTTKSS 127
>BC037400-1|AAH37400.1| 482|Homo sapiens makorin, ring finger
protein, 1 protein.
Length = 482
Score = 35.1 bits (77), Expect = 0.55
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 260 VXCSXYFXIGACRHGDRCSRIHNKPTFVSDCITTKLVCKST 382
V C YF G C +GDRC H+KP + T+L KS+
Sbjct: 88 VVCK-YFQRGYCIYGDRCRYEHSKPLKQEEATATELTTKSS 127
>BC025955-1|AAH25955.1| 482|Homo sapiens makorin, ring finger
protein, 1 protein.
Length = 482
Score = 35.1 bits (77), Expect = 0.55
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 260 VXCSXYFXIGACRHGDRCSRIHNKPTFVSDCITTKLVCKST 382
V C YF G C +GDRC H+KP + T+L KS+
Sbjct: 88 VVCK-YFQRGYCIYGDRCRYEHSKPLKQEEATATELTTKSS 127
>AM236048-1|CAJ84705.1| 329|Homo sapiens makorin-1 protein.
Length = 329
Score = 35.1 bits (77), Expect = 0.55
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 260 VXCSXYFXIGACRHGDRCSRIHNKPTFVSDCITTKLVCKST 382
V C YF G C +GDRC H+KP + T+L KS+
Sbjct: 88 VVCK-YFQRGYCIYGDRCRYEHSKPLKQEEATATELTTKSS 127
>AF192793-1|AAF18979.1| 482|Homo sapiens makorin 1 protein.
Length = 482
Score = 35.1 bits (77), Expect = 0.55
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 260 VXCSXYFXIGACRHGDRCSRIHNKPTFVSDCITTKLVCKST 382
V C YF G C +GDRC H+KP + T+L KS+
Sbjct: 88 VVCK-YFQRGYCIYGDRCRYEHSKPLKQEEATATELTTKSS 127
>AF192784-1|AAF17487.1| 482|Homo sapiens makorin 1 protein.
Length = 482
Score = 35.1 bits (77), Expect = 0.55
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 260 VXCSXYFXIGACRHGDRCSRIHNKPTFVSDCITTKLVCKST 382
V C YF G C +GDRC H+KP + T+L KS+
Sbjct: 88 VVCK-YFQRGYCIYGDRCRYEHSKPLKQEEATATELTTKSS 127
>AF117233-1|AAF17214.1| 328|Homo sapiens znf-xp protein protein.
Length = 328
Score = 35.1 bits (77), Expect = 0.55
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 260 VXCSXYFXIGACRHGDRCSRIHNKPTFVSDCITTKLVCKST 382
V C YF G C +GDRC H+KP + T+L KS+
Sbjct: 88 VVCK-YFQRGYCIYGDRCRYEHSKPLKQEEATATELTTKSS 127
>AB209298-1|BAD92535.1| 409|Homo sapiens makorin, ring finger
protein, 1 variant protein.
Length = 409
Score = 35.1 bits (77), Expect = 0.55
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 260 VXCSXYFXIGACRHGDRCSRIHNKPTFVSDCITTKLVCKST 382
V C YF G C +GDRC H+KP + T+L KS+
Sbjct: 85 VVCK-YFQRGYCIYGDRCRYEHSKPLKQEEATATELTTKSS 124
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 33.9 bits (74), Expect = 1.3
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +3
Query: 381 QNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVX-DNLGDHXXG 557
Q + + + +V+ N+ D ++ D+ +V EC K+G + + + + G+
Sbjct: 435 QKLLRKQESTVMVLRNMVDP--KDIDDDLEGEVTEEC-GKFGAVNRVIIYQEKQGEEEDA 491
Query: 558 NVXIK----FRREEDAXXAVNDLNNRWFGGRPVYAEL 656
+ +K F + A+ LN RWF GR V AE+
Sbjct: 492 EIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEV 528
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 33.9 bits (74), Expect = 1.3
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +3
Query: 381 QNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVX-DNLGDHXXG 557
Q + + + +V+ N+ D ++ D+ +V EC K+G + + + + G+
Sbjct: 453 QKLLRKQESTVMVLRNMVDP--KDIDDDLEGEVTEEC-GKFGAVNRVIIYQEKQGEEEDA 509
Query: 558 NVXIK----FRREEDAXXAVNDLNNRWFGGRPVYAEL 656
+ +K F + A+ LN RWF GR V AE+
Sbjct: 510 EIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEV 546
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 33.9 bits (74), Expect = 1.3
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +3
Query: 381 QNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVX-DNLGDHXXG 557
Q + + + +V+ N+ D ++ D+ +V EC K+G + + + + G+
Sbjct: 410 QKLLRKQESTVMVLRNMVDP--KDIDDDLEGEVTEEC-GKFGAVNRVIIYQEKQGEEEDA 466
Query: 558 NVXIK----FRREEDAXXAVNDLNNRWFGGRPVYAEL 656
+ +K F + A+ LN RWF GR V AE+
Sbjct: 467 EIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEV 503
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 33.9 bits (74), Expect = 1.3
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +3
Query: 381 QNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVX-DNLGDHXXG 557
Q + + + +V+ N+ D ++ D+ +V EC K+G + + + + G+
Sbjct: 410 QKLLRKQESTVMVLRNMVDP--KDIDDDLEGEVTEEC-GKFGAVNRVIIYQEKQGEEEDA 466
Query: 558 NVXIK----FRREEDAXXAVNDLNNRWFGGRPVYAEL 656
+ +K F + A+ LN RWF GR V AE+
Sbjct: 467 EIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEV 503
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 33.9 bits (74), Expect = 1.3
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +3
Query: 381 QNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVX-DNLGDHXXG 557
Q + + + +V+ N+ D ++ D+ +V EC K+G + + + + G+
Sbjct: 393 QKLLRKQESTVMVLRNMVDP--KDIDDDLEGEVTEEC-GKFGAVNRVIIYQEKQGEEEDA 449
Query: 558 NVXIK----FRREEDAXXAVNDLNNRWFGGRPVYAEL 656
+ +K F + A+ LN RWF GR V AE+
Sbjct: 450 EIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEV 486
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 33.9 bits (74), Expect = 1.3
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +3
Query: 381 QNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVX-DNLGDHXXG 557
Q + + + +V+ N+ D ++ D+ +V EC K+G + + + + G+
Sbjct: 436 QKLLRKQESTVMVLRNMVDP--KDIDDDLEGEVTEEC-GKFGAVNRVIIYQEKQGEEEDA 492
Query: 558 NVXIK----FRREEDAXXAVNDLNNRWFGGRPVYAEL 656
+ +K F + A+ LN RWF GR V AE+
Sbjct: 493 EIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEV 529
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 33.9 bits (74), Expect = 1.3
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +3
Query: 381 QNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVX-DNLGDHXXG 557
Q + + + +V+ N+ D ++ D+ +V EC K+G + + + + G+
Sbjct: 436 QKLLRKQESTVMVLRNMVDP--KDIDDDLEGEVTEEC-GKFGAVNRVIIYQEKQGEEEDA 492
Query: 558 NVXIK----FRREEDAXXAVNDLNNRWFGGRPVYAEL 656
+ +K F + A+ LN RWF GR V AE+
Sbjct: 493 EIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEV 529
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 33.9 bits (74), Expect = 1.3
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +3
Query: 381 QNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVX-DNLGDHXXG 557
Q + + + +V+ N+ D ++ D+ +V EC K+G + + + + G+
Sbjct: 450 QKLLRKQESTVMVLRNMVDP--KDIDDDLEGEVTEEC-GKFGAVNRVIIYQEKQGEEEDA 506
Query: 558 NVXIK----FRREEDAXXAVNDLNNRWFGGRPVYAEL 656
+ +K F + A+ LN RWF GR V AE+
Sbjct: 507 EIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEV 543
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 33.9 bits (74), Expect = 1.3
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +3
Query: 381 QNXAKSADGSHLVVANVSDEXMQEHYDNFCEDVXVECEDKYGEIXEMNVX-DNLGDHXXG 557
Q + + + +V+ N+ D ++ D+ +V EC K+G + + + + G+
Sbjct: 453 QKLLRKQESTVMVLRNMVDP--KDIDDDLEGEVTEEC-GKFGAVNRVIIYQEKQGEEEDA 509
Query: 558 NVXIK----FRREEDAXXAVNDLNNRWFGGRPVYAEL 656
+ +K F + A+ LN RWF GR V AE+
Sbjct: 510 EIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEV 546
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 33.5 bits (73), Expect = 1.7
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +3
Query: 501 YGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSRE 680
YG I V G H G + F E+A AV ++N R G +P+Y L+ + R+
Sbjct: 317 YGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERK 375
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 33.5 bits (73), Expect = 1.7
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +3
Query: 501 YGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAELSPVTDSRE 680
YG I V G H G + F E+A AV ++N R G +P+Y L+ + R+
Sbjct: 317 YGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERK 375
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 33.1 bits (72), Expect = 2.2
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +3
Query: 438 EXMQEHYDNFCEDVXVE-CED---KYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAV 605
E + NF ED+ E +D K+G + V + G + F R EDA AV
Sbjct: 164 EFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV 223
Query: 606 NDLNNRWFGGRPVY 647
+++N + G+ +Y
Sbjct: 224 DEMNGKELNGKQIY 237
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 33.1 bits (72), Expect = 2.2
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +3
Query: 438 EXMQEHYDNFCEDVXVE-CED---KYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAV 605
E + NF ED+ E +D K+G + V + G + F R EDA AV
Sbjct: 189 EFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV 248
Query: 606 NDLNNRWFGGRPVY 647
+++N + G+ +Y
Sbjct: 249 DEMNGKELNGKQIY 262
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 33.1 bits (72), Expect = 2.2
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +3
Query: 438 EXMQEHYDNFCEDVXVE-CED---KYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAV 605
E + NF ED+ E +D K+G + V + G + F R EDA AV
Sbjct: 189 EFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV 248
Query: 606 NDLNNRWFGGRPVY 647
+++N + G+ +Y
Sbjct: 249 DEMNGKELNGKQIY 262
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 33.1 bits (72), Expect = 2.2
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +3
Query: 438 EXMQEHYDNFCEDVXVE-CED---KYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAV 605
E + NF ED+ E +D K+G + V + G + F R EDA AV
Sbjct: 189 EFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV 248
Query: 606 NDLNNRWFGGRPVY 647
+++N + G+ +Y
Sbjct: 249 DEMNGKELNGKQIY 262
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 33.1 bits (72), Expect = 2.2
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +3
Query: 438 EXMQEHYDNFCEDVXVE-CED---KYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAV 605
E + NF ED+ E +D K+G + V + G + F R EDA AV
Sbjct: 189 EFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV 248
Query: 606 NDLNNRWFGGRPVY 647
+++N + G+ +Y
Sbjct: 249 DEMNGKELNGKQIY 262
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 32.7 bits (71), Expect = 2.9
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +3
Query: 462 NFCEDVXVE-CED---KYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWF 629
NF ED+ E +D K+G + V + G + F R EDA AV+++N +
Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 256
Query: 630 GGRPVY 647
G+ +Y
Sbjct: 257 NGKQIY 262
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 32.7 bits (71), Expect = 2.9
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +3
Query: 462 NFCEDVXVE-CED---KYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWF 629
NF ED+ E +D K+G + V + G + F R EDA AV+++N +
Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 256
Query: 630 GGRPVY 647
G+ +Y
Sbjct: 257 NGKQIY 262
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 32.7 bits (71), Expect = 2.9
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +3
Query: 462 NFCEDVXVE-CED---KYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWF 629
NF ED+ E +D K+G + V + G + F R EDA AV+++N +
Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 256
Query: 630 GGRPVY 647
G+ +Y
Sbjct: 257 NGKQIY 262
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 32.7 bits (71), Expect = 2.9
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +3
Query: 462 NFCEDVXVE-CED---KYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWF 629
NF ED+ E +D K+G + V + G + F R EDA AV+++N +
Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 256
Query: 630 GGRPVY 647
G+ +Y
Sbjct: 257 NGKQIY 262
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 32.7 bits (71), Expect = 2.9
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +3
Query: 462 NFCEDVXVE-CED---KYGEIXEMNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWF 629
NF ED+ E +D K+G + V + G + F R EDA AV+++N +
Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 256
Query: 630 GGRPVY 647
G+ +Y
Sbjct: 257 NGKQIY 262
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 31.9 bits (69), Expect = 5.1
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +3
Query: 519 MNVXDNLGDHXXGNVXIKFRREEDAXXAVNDLNNRWFGGRPVYAEL 656
+ V N G I+F EDA A+N N R GGR + EL
Sbjct: 489 IKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIGGRAIRLEL 534
>D63484-1|BAA09771.1| 944|Homo sapiens KIAA0150 protein.
Length = 944
Score = 31.1 bits (67), Expect = 8.9
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 248 EKDXVXCSXYFXIGACRHGDRCSRIHNKPTFVSDCIT-TKLVCKST 382
EK C Y G C G+RC IH+ P V+ C + CK T
Sbjct: 663 EKRKEYCMYYNRFGRCNRGERCPYIHD-PEKVAVCTRFVRGTCKKT 707
>BC038670-1|AAH38670.1| 948|Homo sapiens zinc finger CCCH-type
containing 3 protein.
Length = 948
Score = 31.1 bits (67), Expect = 8.9
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 248 EKDXVXCSXYFXIGACRHGDRCSRIHNKPTFVSDCIT-TKLVCKST 382
EK C Y G C G+RC IH+ P V+ C + CK T
Sbjct: 667 EKRKEYCMYYNRFGRCNRGERCPYIHD-PEKVAVCTRFVRGTCKKT 711
>BC034435-1|AAH34435.1| 335|Homo sapiens ZC3H3 protein protein.
Length = 335
Score = 31.1 bits (67), Expect = 8.9
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 248 EKDXVXCSXYFXIGACRHGDRCSRIHNKPTFVSDCIT-TKLVCKST 382
EK C Y G C G+RC IH+ P V+ C + CK T
Sbjct: 54 EKRKEYCMYYNRFGRCNRGERCPYIHD-PEKVAVCTRFVRGTCKKT 98
>BC001974-1|AAH01974.1| 498|Homo sapiens Unknown (protein for
IMAGE:3457069) protein.
Length = 498
Score = 31.1 bits (67), Expect = 8.9
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 248 EKDXVXCSXYFXIGACRHGDRCSRIHNKPTFVSDCIT-TKLVCKST 382
EK C Y G C G+RC IH+ P V+ C + CK T
Sbjct: 217 EKRKEYCMYYNRFGRCNRGERCPYIHD-PEKVAVCTRFVRGTCKKT 261
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,162,419
Number of Sequences: 237096
Number of extensions: 1684476
Number of successful extensions: 10641
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 10313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10634
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18165255900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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