Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_B01
         (1218 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            26   2.6  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   7.8  
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    24   7.8  

>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 14/58 (24%), Positives = 31/58 (53%)
 Frame = +3

Query: 702 TFWSIIFFSGFDEKNYLKILWVIISHFFVSFLSLLNSRELYAASILPSYXVLMITSYI 875
           TFW  ++ +    +++L++LWV  ++  + F+   ++ E Y A  +P   +L  T  +
Sbjct: 525 TFWEWLYAALKIIRDHLQVLWV--NNTIIGFIH-KSTAEKYLAKCVPGTFLLRFTDSV 579


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 7.8
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +3

Query: 669 SAMTLCMILLNTFWSIIFFSGFDEKNYLKILWVIISHFFV 788
           S +T+  IL    W+++ + G      +  L +I S +F+
Sbjct: 657 SLLTVFQILTGEDWNMVMYDGIQAYGGVASLGIIASIYFI 696


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 24.2 bits (50), Expect = 7.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -1

Query: 624 CQGQSSQLIH*LVQMLHSLFRILGQT 547
           CQG S   +   VQ  H +F ILG T
Sbjct: 325 CQGDSGGPLQVTVQENHCMFYILGVT 350


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 980,021
Number of Sequences: 2352
Number of extensions: 19721
Number of successful extensions: 56
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 138565233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)