Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_B01
         (1218 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051658-1|AAK93082.1|  238|Drosophila melanogaster LD12037p pro...   279   7e-75
AF508786-1|AAN63815.1|  238|Drosophila melanogaster presenilin s...   279   7e-75
AE014134-464|AAF51212.1|  238|Drosophila melanogaster CG2855-PA ...   279   7e-75
AE014134-1592|AAF52735.1|  275|Drosophila melanogaster CG17906-P...    31   2.4  

>AY051658-1|AAK93082.1|  238|Drosophila melanogaster LD12037p
           protein.
          Length = 238

 Score =  279 bits (683), Expect = 7e-75
 Identities = 127/232 (54%), Positives = 170/232 (73%)
 Frame = +3

Query: 216 MTLAEFFSCSLLAFGAPIVMFAMTVATDPVRIIIMIAAAFGWXXXXXXXXXVWYAVVPLR 395
           MTL EFF C+ +AFG P  +F  T+A DPVRIII+IAAAF W         +WYA++PL+
Sbjct: 1   MTLPEFFGCTFIAFGPPFALFVFTIANDPVRIIILIAAAFFWLLSLLISS-LWYALIPLK 59

Query: 396 SYLVFGMIFAIIFQELFRYGMYLLLRKTEAGLKEISENHEIGSNKLEMAYVSGLGFGTMS 575
            +L FG++F++ FQE FRY +Y +LR TE GL  ++E+  +  NK  +AYVSGLGFG +S
Sbjct: 60  EFLAFGVVFSVCFQEAFRYIIYRILRSTEQGLHAVAEDTRVTDNKHILAYVSGLGFGIIS 119

Query: 576 GAFALVNVLADSIGPGTLGLSGGTEYFFVTSSAMTLCMILLNTFWSIIFFSGFDEKNYLK 755
           G FALVNVLAD  GPGT+GL GGTE FFVTS+A  L +ILL+TFWS+IFF+ FD  NY+ 
Sbjct: 120 GMFALVNVLADMSGPGTMGLKGGTELFFVTSAAQALSIILLHTFWSVIFFNAFDTNNYIH 179

Query: 756 ILWVIISHFFVSFLSLLNSRELYAASILPSYXVLMITSYIAFRCAGGSXKTF 911
           I +V+ SH FVS ++LLN+ ELY  ++L +Y V ++T  +AFR AGG+ ++F
Sbjct: 180 IGYVVFSHLFVSLITLLNANELYTTTLLINYLVTILTGVLAFRVAGGTSRSF 231


>AF508786-1|AAN63815.1|  238|Drosophila melanogaster presenilin
           stabilization factor protein.
          Length = 238

 Score =  279 bits (683), Expect = 7e-75
 Identities = 127/232 (54%), Positives = 170/232 (73%)
 Frame = +3

Query: 216 MTLAEFFSCSLLAFGAPIVMFAMTVATDPVRIIIMIAAAFGWXXXXXXXXXVWYAVVPLR 395
           MTL EFF C+ +AFG P  +F  T+A DPVRIII+IAAAF W         +WYA++PL+
Sbjct: 1   MTLPEFFGCTFIAFGPPFALFVFTIANDPVRIIILIAAAFFWLLSLLISS-LWYALIPLK 59

Query: 396 SYLVFGMIFAIIFQELFRYGMYLLLRKTEAGLKEISENHEIGSNKLEMAYVSGLGFGTMS 575
            +L FG++F++ FQE FRY +Y +LR TE GL  ++E+  +  NK  +AYVSGLGFG +S
Sbjct: 60  EFLAFGVVFSVCFQEAFRYIIYRILRSTEQGLHAVAEDTRVTDNKHILAYVSGLGFGIIS 119

Query: 576 GAFALVNVLADSIGPGTLGLSGGTEYFFVTSSAMTLCMILLNTFWSIIFFSGFDEKNYLK 755
           G FALVNVLAD  GPGT+GL GGTE FFVTS+A  L +ILL+TFWS+IFF+ FD  NY+ 
Sbjct: 120 GMFALVNVLADMSGPGTMGLKGGTELFFVTSAAQALSIILLHTFWSVIFFNAFDTNNYIH 179

Query: 756 ILWVIISHFFVSFLSLLNSRELYAASILPSYXVLMITSYIAFRCAGGSXKTF 911
           I +V+ SH FVS ++LLN+ ELY  ++L +Y V ++T  +AFR AGG+ ++F
Sbjct: 180 IGYVVFSHLFVSLITLLNANELYTTTLLINYLVTILTGVLAFRVAGGTSRSF 231


>AE014134-464|AAF51212.1|  238|Drosophila melanogaster CG2855-PA
           protein.
          Length = 238

 Score =  279 bits (683), Expect = 7e-75
 Identities = 127/232 (54%), Positives = 170/232 (73%)
 Frame = +3

Query: 216 MTLAEFFSCSLLAFGAPIVMFAMTVATDPVRIIIMIAAAFGWXXXXXXXXXVWYAVVPLR 395
           MTL EFF C+ +AFG P  +F  T+A DPVRIII+IAAAF W         +WYA++PL+
Sbjct: 1   MTLPEFFGCTFIAFGPPFALFVFTIANDPVRIIILIAAAFFWLLSLLISS-LWYALIPLK 59

Query: 396 SYLVFGMIFAIIFQELFRYGMYLLLRKTEAGLKEISENHEIGSNKLEMAYVSGLGFGTMS 575
            +L FG++F++ FQE FRY +Y +LR TE GL  ++E+  +  NK  +AYVSGLGFG +S
Sbjct: 60  EFLAFGVVFSVCFQEAFRYIIYRILRSTEQGLHAVAEDTRVTDNKHILAYVSGLGFGIIS 119

Query: 576 GAFALVNVLADSIGPGTLGLSGGTEYFFVTSSAMTLCMILLNTFWSIIFFSGFDEKNYLK 755
           G FALVNVLAD  GPGT+GL GGTE FFVTS+A  L +ILL+TFWS+IFF+ FD  NY+ 
Sbjct: 120 GMFALVNVLADMSGPGTMGLKGGTELFFVTSAAQALSIILLHTFWSVIFFNAFDTNNYIH 179

Query: 756 ILWVIISHFFVSFLSLLNSRELYAASILPSYXVLMITSYIAFRCAGGSXKTF 911
           I +V+ SH FVS ++LLN+ ELY  ++L +Y V ++T  +AFR AGG+ ++F
Sbjct: 180 IGYVVFSHLFVSLITLLNANELYTTTLLINYLVTILTGVLAFRVAGGTSRSF 231


>AE014134-1592|AAF52735.1|  275|Drosophila melanogaster CG17906-PA
           protein.
          Length = 275

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
 Frame = +3

Query: 603 ADSIGPGTLGLSGGTEYFFVTSSAMTLCMILLNTFWSIIFFSGFDEKNY-------LKIL 761
           A  IG      +GG  + ++T    TLC+    T+ ++I    +  ++Y       LKI 
Sbjct: 59  AGVIGSMMQDFNGGRWFIYLTDWGFTLCLFTC-TYGAVIATIYYFNQSYFAPGHCALKIY 117

Query: 762 WVIISHFFVSFLSLLNSRELYAA 830
           W  ISH+  S LS+L +   +AA
Sbjct: 118 W--ISHYTTSVLSMLITTVFWAA 138


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,825,927
Number of Sequences: 53049
Number of extensions: 845382
Number of successful extensions: 3351
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3339
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6478647390
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)