Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_A24
         (1262 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0244 - 1844161-1844241,1844356-1844394,1844510-1844617,184...    29   5.9  
12_02_0346 - 17776871-17781445                                         29   7.7  

>06_01_0244 -
           1844161-1844241,1844356-1844394,1844510-1844617,
           1844638-1844685,1845058-1845111,1845214-1845268,
           1845442-1845522,1846238-1846615,1847196-1847401
          Length = 349

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 442 LLIXHLKLSNVLIQNXLSKLYKFVIIKLQ 356
           L+  HL L  ++ Q  + KLY F +IKLQ
Sbjct: 248 LVAVHLNLMTMMEQQLIDKLYYFFLIKLQ 276


>12_02_0346 - 17776871-17781445
          Length = 1524

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = -2

Query: 448 KYLLIXHLKLSNVLIQNXLSKLYKFVIIKLQERYNSHSQSFSRCK*SMGNYWKYRILLI 272
           +YL I   ++    + N +++ Y  +++ LQE Y      F R    MGN  K R  L+
Sbjct: 696 RYLRIKDSRMCGASLPNSITRFYHLLVLDLQEHYG--ELGFPR---DMGNLLKLRHFLV 749


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,142,126
Number of Sequences: 37544
Number of extensions: 129220
Number of successful extensions: 217
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3910923072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)