Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_A22
(1320 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0299 - 17051570-17052474,17053542-17053755 29 0.32
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 32 1.2
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.5
03_05_0918 - 28785233-28786613,28786894-28787140,28787773-28788238 25 1.9
04_01_0246 + 3225743-3226473,3226493-3226624,3227580-3227670,322... 25 1.9
12_02_1174 - 26696869-26698191 25 2.0
04_04_0679 + 27214577-27215023 25 3.7
06_01_1050 + 8262033-8262165,8262262-8262391,8262486-8263026 25 4.5
02_03_0279 + 17250347-17252098 24 5.4
05_01_0380 + 2978256-2979284 24 5.6
06_03_1368 - 29612463-29612638,29613135-29613222,29613334-296134... 29 6.2
03_01_0515 - 3864796-3865425 29 6.2
08_02_0937 + 22801526-22802461 29 8.2
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600... 24 9.0
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.1 bits (62), Expect(2) = 0.32
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = -1
Query: 1143 FFXGXPPXXGKXXFPPXXXXXXPXPPXXXPXXXXXXXGEXXXXPXXPNPLFPXGXXXSXX 964
F PP PP P PP P P P P FP
Sbjct: 231 FLTPPPPPFLPFPLPPIPFLTPPSPPP--PAFPFPLP----PWPWAPPPAFPFPHLPPIF 284
Query: 963 XXKTPPPPPP 934
+PPPPPP
Sbjct: 285 SPPSPPPPPP 294
Score = 23.4 bits (48), Expect(2) = 0.32
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 951 PPPPPPXP 928
PPPPPP P
Sbjct: 323 PPPPPPPP 330
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 31.9 bits (69), Expect = 1.2
Identities = 24/93 (25%), Positives = 24/93 (25%)
Frame = -1
Query: 1206 EXPPXPXXXXXXXXXGPLXXXFFXGXPPXXGKXXFPPXXXXXXPXPPXXXPXXXXXXXGE 1027
E PP P P G PP PP P PP P
Sbjct: 1121 ELPPLPDGPPPLPLDAPPPPPLPEGPPPLPSDS--PPCQPPLPPSPPPATPPPPPPL--S 1176
Query: 1026 XXXXPXXPNPLFPXGXXXSXXXXKTPPPPPPXP 928
P P P P G P PPP P
Sbjct: 1177 PSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIP 1209
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.5 bits (68), Expect = 1.5
Identities = 21/91 (23%), Positives = 23/91 (25%)
Frame = -1
Query: 1200 PPXPXXXXXXXXXGPLXXXFFXGXPPXXGKXXFPPXXXXXXPXPPXXXPXXXXXXXGEXX 1021
PP P P PP PP P P P
Sbjct: 665 PPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPPPPPPANRS 724
Query: 1020 XXPXXPNPLFPXGXXXSXXXXKTPPPPPPXP 928
P P P P + + PP PPP P
Sbjct: 725 NGPSAPAPPLPP-PLPAAANKRNPPAPPPPP 754
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/67 (29%), Positives = 21/67 (31%)
Frame = -1
Query: 1128 PPXXGKXXFPPXXXXXXPXPPXXXPXXXXXXXGEXXXXPXXPNPLFPXGXXXSXXXXKTP 949
PP K F P P PP P P P P P + P
Sbjct: 553 PPSGNKPAFSPP----PPPPPPPPPPLPQSNYASSQPPPPPPPPPLP-----NCLVPSPP 603
Query: 948 PPPPPXP 928
PPPPP P
Sbjct: 604 PPPPPPP 610
Score = 30.7 bits (66), Expect = 2.7
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = -1
Query: 1125 PXXGKXXFPPXXXXXXPXPPXXXPXXXXXXXGEXXXXPXXPNPLFPXGXXXSXXXXKTPP 946
P K P P PP P P P P P S PP
Sbjct: 529 PSDRKLPSPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPP--PPPLPQSNYASSQPP 586
Query: 945 PPPPXP 928
PPPP P
Sbjct: 587 PPPPPP 592
Score = 30.7 bits (66), Expect = 2.7
Identities = 18/67 (26%), Positives = 18/67 (26%)
Frame = -1
Query: 1128 PPXXGKXXFPPXXXXXXPXPPXXXPXXXXXXXGEXXXXPXXPNPLFPXGXXXSXXXXKTP 949
PP G P P P P P PL P P
Sbjct: 653 PPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAP 712
Query: 948 PPPPPXP 928
PPPPP P
Sbjct: 713 PPPPPPP 719
Score = 30.3 bits (65), Expect = 3.5
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -1
Query: 1077 PXPPXXXPXXXXXXXGEXXXXPXXPNPLFPXGXXXSXXXXKTPPPPPPXP 928
P PP P P P P P S + PPPPPP P
Sbjct: 547 PPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASS---QPPPPPPPPP 593
>03_05_0918 - 28785233-28786613,28786894-28787140,28787773-28788238
Length = 697
Score = 25.4 bits (53), Expect(2) = 1.9
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 954 TPPPPPPXP 928
TPPPPPP P
Sbjct: 15 TPPPPPPPP 23
Score = 24.2 bits (50), Expect(2) = 1.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 951 PPPPPPXPXXXK 916
PPPPPP P K
Sbjct: 17 PPPPPPPPPPAK 28
>04_01_0246 +
3225743-3226473,3226493-3226624,3227580-3227670,
3228617-3229074,3229342-3229864
Length = 644
Score = 25.4 bits (53), Expect(2) = 1.9
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 954 TPPPPPPXP 928
TPPPPPP P
Sbjct: 36 TPPPPPPPP 44
Score = 24.2 bits (50), Expect(2) = 1.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 951 PPPPPPXPXXXK 916
PPPPPP P K
Sbjct: 38 PPPPPPPPFSFK 49
>12_02_1174 - 26696869-26698191
Length = 440
Score = 25.4 bits (53), Expect(2) = 2.0
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 1014 PXXPNPLFPXGXXXSXXXXKTPPPPPPXP 928
P P P+ P S PPPPPP P
Sbjct: 138 PHRPPPVKPQ-PPPSLPPPPPPPPPPPPP 165
Score = 24.2 bits (50), Expect(2) = 2.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 951 PPPPPPXPXXXK 916
PPPPPP P K
Sbjct: 160 PPPPPPRPPSVK 171
>04_04_0679 + 27214577-27215023
Length = 148
Score = 25.0 bits (52), Expect(2) = 3.7
Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Frame = +2
Query: 929 GXGGGGGGVXXXXXEXXXPXGKRGFGXL---GXXXXSPXXXXXXXGXXXGGXGXXXXXKG 1099
G GGGGGGV GFG G G GG G +G
Sbjct: 73 GGGGGGGGVGGRGGSSGRGGHGGGFGWAGGQGHGGWGAGAGAFGGGSGSGGGGGGWSARG 132
Query: 1100 G 1102
G
Sbjct: 133 G 133
Score = 23.8 bits (49), Expect(2) = 3.7
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 911 FXFXXXGXGGGGGG 952
F F G GGGGGG
Sbjct: 66 FGFGFGGGGGGGGG 79
>06_01_1050 + 8262033-8262165,8262262-8262391,8262486-8263026
Length = 267
Score = 25.4 bits (53), Expect(2) = 4.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 954 TPPPPPPXP 928
TPPPPPP P
Sbjct: 142 TPPPPPPPP 150
Score = 23.0 bits (47), Expect(2) = 4.5
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = -1
Query: 1014 PXXPNPLFPXGXXXSXXXXKTPPPPPP 934
P PL P PPPPPP
Sbjct: 123 PVTHQPLEPPRPPPREQDATPPPPPPP 149
>02_03_0279 + 17250347-17252098
Length = 583
Score = 24.2 bits (50), Expect(2) = 5.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 951 PPPPPPXPXXXK 916
PPPPPP P K
Sbjct: 129 PPPPPPPPLFAK 140
Score = 23.8 bits (49), Expect(2) = 5.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 954 TPPPPPPXP 928
+PPPPPP P
Sbjct: 123 SPPPPPPPP 131
>05_01_0380 + 2978256-2979284
Length = 342
Score = 24.2 bits (50), Expect(2) = 5.6
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 951 PPPPPPXPXXXK 916
PPPPPP P K
Sbjct: 36 PPPPPPRPFSRK 47
Score = 23.8 bits (49), Expect(2) = 5.6
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 957 KTPPPPPPXP 928
+ PPPPPP P
Sbjct: 24 RMPPPPPPPP 33
>06_03_1368 - 29612463-29612638,29613135-29613222,29613334-29613474,
29613561-29613595,29613990-29614054,29614286-29614335,
29614417-29614521,29614608-29614688,29614771-29614852,
29614941-29614995,29615111-29616164,29617202-29617289,
29617379-29617485,29617568-29617686,29617784-29617994
Length = 818
Score = 29.5 bits (63), Expect = 6.2
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 1014 PXXPNPLFPXGXXXSXXXXKTPPPPPPXP 928
P P P P G + TP PPPP P
Sbjct: 6 PHLPPPAPPPGAAAADPPESTPAPPPPPP 34
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.5 bits (63), Expect = 6.2
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = -1
Query: 1101 PPXXXXXXPXPPXXXPXXXXXXXGEXXXXPXXPNPLFPXGXXXSXXXXKTPPPPPP 934
PP PP P P P P P S PPPPPP
Sbjct: 39 PPSPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPP 94
>08_02_0937 + 22801526-22802461
Length = 311
Score = 29.1 bits (62), Expect = 8.2
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -1
Query: 1077 PXPPXXXPXXXXXXXGEXXXXPXXPNPLFPXGXXXSXXXXKTPPPPPPXP 928
P PP P GE PNP P PPPPPP P
Sbjct: 35 PPPPPSRPLFCPRCRGEFLEEEN-PNP--PPEPEEEEEVSSPPPPPPPPP 81
>01_06_0090 + 26358051-26359157,26359582-26359701,26359968-26360099,
26360194-26360375,26360488-26360602,26362001-26362135,
26362261-26362395
Length = 641
Score = 23.8 bits (49), Expect(2) = 9.0
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = -1
Query: 1014 PXXPNPLFPXGXXXSXXXXKTPPPPPP 934
P P P P PPPPPP
Sbjct: 271 PIPPPPPMPALSVCGRAAAPPPPPPPP 297
Score = 23.4 bits (48), Expect(2) = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 951 PPPPPPXP 928
PPPPPP P
Sbjct: 291 PPPPPPPP 298
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,855,432
Number of Sequences: 37544
Number of extensions: 424764
Number of successful extensions: 12078
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7174
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4132076460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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